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1.
Biomol NMR Assign ; 15(1): 45-51, 2021 04.
Article in English | MEDLINE | ID: mdl-33123960

ABSTRACT

The C-terminally truncated Y145Stop variant of prion protein (PrP23-144) has been linked to a heritable prionopathy in humans and is also capable of triggering a transmissible prion disease in mice. PrP23-144 can be converted from soluble monomeric form to amyloid under physiological conditions, providing an in vitro model for investigating the molecular basis of amyloid strains and cross-seeding barriers. Here, we use magic-angle spinning solid-state NMR to establish the sequential backbone and sidechain 13C and 15N chemical shift assignments for amyloid fibrils formed by the A117V and M129V mutants of human PrP23-144, which in the context of full length PrP in vivo are among the specific residues associated with development of Gerstmann-Straüssler-Scheinker disease. The chemical shift data are utilized to identify amino acids comprising the rigid amyloid core regions and to predict the protein secondary structures for human PrP23-144 A117V and M129V fibrils.


Subject(s)
Nuclear Magnetic Resonance, Biomolecular , Prion Proteins , Amyloid , Animals , Mice
2.
J Magn Reson ; 311: 106680, 2020 02.
Article in English | MEDLINE | ID: mdl-31951864

ABSTRACT

Despite breakthroughs in MAS NMR hardware and experimental methodologies, sensitivity remains a major challenge for large and complex biological systems. Here, we report that 3-4 fold higher sensitivities can be obtained in heteronuclear-detected experiments, using a novel HCN CPMAS probe, where the sample coil and the electronics operate at cryogenic temperatures, while the sample is maintained at ambient temperatures (BioSolids CryoProbe™). Such intensity enhancements permit recording 2D and 3D experiments that are otherwise time-prohibitive, such as 2D 15N-15N proton-driven spin diffusion and 15N-13C double cross polarization to natural abundance carbon experiments. The benefits of CPMAS CryoProbe-based experiments are illustrated for assemblies of kinesin Kif5b with microtubules, HIV-1 capsid protein assemblies, and fibrils of human Y145Stop and fungal HET-s prion proteins - demanding systems for conventional MAS solid-state NMR and excellent reference systems in terms of spectral quality. We envision that this probe technology will be beneficial for a wide range of applications, especially for biological systems suffering from low intrinsic sensitivity and at physiological temperatures.


Subject(s)
Hydrogen Cyanide/chemistry , Nuclear Magnetic Resonance, Biomolecular/methods , Capsid Proteins/chemistry , Carbon/chemistry , Cold Temperature , Escherichia coli/chemistry , Fungi/chemistry , HIV-1/chemistry , Humans , Indicators and Reagents , Kinesins/chemistry , Microscopy, Electron, Transmission , Microtubules/chemistry , Microtubules/ultrastructure , Prion Proteins/chemistry , Sensitivity and Specificity , Temperature
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