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1.
Genome Announc ; 5(23)2017 Jun 08.
Article in English | MEDLINE | ID: mdl-28596387

ABSTRACT

Crimean-Congo hemorrhagic fever virus (CCHFV) is a geographically widespread RNA virus with a high degree of genomic diversity that complicates sequence-based diagnostics. Here, we sequenced eight CCHFV strains for improved assay design and deposition into FDA-ARGOS, the FDA's pathogen database for development and verification of next generation sequencing assays.

2.
Tissue Antigens ; 57(1): 39-45, 2001 Jan.
Article in English | MEDLINE | ID: mdl-11169257

ABSTRACT

Human tumor cells frequently exhibit abnormalities in the major histocompatibility complex (MHC) class I surface expression which can be due to structural alterations and/or dysregulation of various components of the MHC class I antigen processing machinery, such as HLA class I heavy and light chains, the peptide transporter and the proteasome subunits. Although several cofactors critical for proper MHC class I assembly have been identified, their contribution to the immune escape phenotype of tumor cells has not been analyzed. In order to determine whether tapasin deficits are an integral part of immune escape mechanisms of human tumors, we studied the constitutive and cytokine-regulated expression pattern of tapasin in malignant cells of distinct histology. Heterogeneous and reduced expression levels of tapasin were found in small-cell lung carcinoma, pancreatic carcinoma, colon carcinoma, head an neck squamous cell carcinoma and renal cell carcinoma cell lines. Tapasin downregulation was also prominent in surgically removed tumor lesions when compared to normal controls. The impaired tapasin expression is often associated with low MHC class I cell surface expression. In addition, various cytokines, including interferon (IFN)-alpha, IFN-gamma, tumor necrosis factor (TNF)-alpha and interleukin (IL)-4, but not granulocyte-macrophage colony stimulating factor (GM-CSF), transcriptionally upregulate to a distinct extent and in a time-dependent manner tapasin expression in tumor cells. Thus, deficient tapasin expression appears to be a frequent event in human tumor cells. Its restoration by cytokines further suggests that impaired tapasin expression in tumors is rather due to dysregulation than to structural alterations.


Subject(s)
Antiporters/antagonists & inhibitors , Antiporters/biosynthesis , Cytokines/physiology , Down-Regulation/immunology , Immunoglobulins/biosynthesis , Neoplasms/immunology , Transcription, Genetic/immunology , Up-Regulation/immunology , Antiporters/genetics , Down-Regulation/genetics , HLA Antigens/biosynthesis , HLA Antigens/genetics , Histocompatibility Antigens Class I/biosynthesis , Histocompatibility Antigens Class I/genetics , Humans , Immunoglobulins/genetics , Membrane Transport Proteins , Neoplasms/genetics , Organ Specificity/genetics , Organ Specificity/immunology , RNA, Messenger/biosynthesis , Tumor Cells, Cultured , Up-Regulation/genetics
3.
Bone Marrow Transplant ; 25 Suppl 2: S88-95, 2000 May.
Article in English | MEDLINE | ID: mdl-10933198

ABSTRACT

An association between oncogenic transformation and repression of different components of the MHC class I antigen processing machinery (APM) have been described in murine model systems. In order to discover whether a similar correlation exists, human tumor cell lines of distinct histology with altered ras protein were analyzed for the expression of APM components utilizing RT-PCR and Western blot analyses. A heterogeneous expression pattern of MHC class I antigens, TAP peptide transporter, proteasome subunits, proteasome activator PA28 and the chaperones calnexin, calreticulin as well as tapasin was displayed by these tumor cell lines. Single or combined deficiencies in the expression and/or function of TAP, LMP2, LMP10 and tapasin were demonstrated in 11 of 12 cell lines studied, whereas the expression of calnexin, calreticulin, beta2-microglobulin, LMP7 and PA28alpha was unaltered or only weakly decreased. The impaired expression of TAP, LMP subunits and tapasin was not associated with altered ras, but resulted in reduced MHC class I surface expression. In particular, a significant allele- and locus-specific downregulation of the HLA-A and HLA-B haplotypes was found. IFN-gamma treatment corrected the TAP, LMP and tapasin deficiencies and enhanced the constitutive PA28alpha, LMP7, calnexin and calreticulin expression which was accompanied with increased levels of MHC class I antigens. Thus, dysregulation rather than structural alterations of different APM components might be one mechanism of colon carcinoma, small cell lung carcinoma and pancreatic carcinoma cell lines to evade immune recognition.


Subject(s)
Antigen Presentation , Cysteine Endopeptidases , Histocompatibility Antigens Class I/metabolism , Multienzyme Complexes , Neoplasms, Glandular and Epithelial/immunology , ATP Binding Cassette Transporter, Subfamily B, Member 2 , ATP Binding Cassette Transporter, Subfamily B, Member 3 , ATP-Binding Cassette Transporters/genetics , ATP-Binding Cassette Transporters/metabolism , Animals , Antigen Presentation/drug effects , Antigen Presentation/genetics , Base Sequence , DNA Primers/genetics , Gene Expression , Genes, ras , Histocompatibility Antigens Class I/genetics , Humans , Interferon-gamma/pharmacology , Mice , Mutation , Neoplasms, Glandular and Epithelial/genetics , Proteasome Endopeptidase Complex , Proteins/genetics , Proteins/metabolism , Recombinant Proteins , Tumor Cells, Cultured
4.
Clin Dysmorphol ; 3(4): 335-9, 1994 Oct.
Article in English | MEDLINE | ID: mdl-7894738

ABSTRACT

We report a mother and daughter who have hypertelorism, mild limb defects, umbilical hernia/omphalocele, natal teeth and minor craniofacial anomalies. These individuals represent the third family with Teebi hypertelorism syndrome, a rare autosomal dominant syndrome.


Subject(s)
Abnormalities, Multiple/genetics , Facial Bones/abnormalities , Hypertelorism/genetics , Natal Teeth , Skull/abnormalities , Adult , Female , Genes, Dominant , Humans , Infant , Syndrome
6.
J Genet Couns ; 1(2): 203-9, 1992 Jun.
Article in English | MEDLINE | ID: mdl-24242009

ABSTRACT

Genetic issues are demanding more attention in the area of public health. Adoption agencies and policymakers are beginning to address these issues where they relate to the adoption process and to the many families involved in adoption in this country. Genetic counselors need to play an active role as both educators of and consultants for adoption professionals and the families with whom they work. To facilitate a partnership between genetics and adoption we have developed a workshop intended to educate adoption professionals about the lifelong implications of genetic conditions on the adoption triad.

7.
Am J Med Genet ; 26(2): 503-10, 1987 Feb.
Article in English | MEDLINE | ID: mdl-3812600

ABSTRACT

We report on a girl with Menkes syndrome (M.S.) and X-2 reciprocal translocation. We conclude that the probable locus for M.S. gene is at band Xq13. This case and other previous case reports of X-linked disorders in females suggest that chromosome analysis is indicated in all females who present with manifestations of a known X-linked lethal condition in order to detect a possible associated balanced X-autosome translocation.


Subject(s)
Brain Diseases, Metabolic/genetics , Menkes Kinky Hair Syndrome/genetics , Translocation, Genetic , X Chromosome , Female , Genetic Linkage , Humans , Infant
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