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1.
Nat Commun ; 10(1): 3670, 2019 08 20.
Article in English | MEDLINE | ID: mdl-31431628

ABSTRACT

Situated at over 5,000 meters above sea level in the Himalayan Mountains, Roopkund Lake is home to the scattered skeletal remains of several hundred individuals of unknown origin. We report genome-wide ancient DNA for 38 skeletons from Roopkund Lake, and find that they cluster into three distinct groups. A group of 23 individuals have ancestry that falls within the range of variation of present-day South Asians. A further 14 have ancestry typical of the eastern Mediterranean. We also identify one individual with Southeast Asian-related ancestry. Radiocarbon dating indicates that these remains were not deposited simultaneously. Instead, all of the individuals with South Asian-related ancestry date to ~800 CE (but with evidence of being deposited in more than one event), while all other individuals date to ~1800 CE. These differences are also reflected in stable isotope measurements, which reveal a distinct dietary profile for the two main groups.


Subject(s)
Body Remains/cytology , DNA/genetics , Fossils , Racial Groups/genetics , Diet , Human Migration , Humans , India , Mediterranean Region , Polymorphism, Single Nucleotide/genetics , Radiometric Dating
2.
Nephron ; 129(2): 104-8, 2015.
Article in English | MEDLINE | ID: mdl-25660845

ABSTRACT

BACKGROUND/AIMS: This study aimed at investigating if M235T polymorphism in the AGT gene and A/G(I8-83) polymorphism in the REN gene correlate with end-stage renal disease (ESRD). METHODS: We analyzed 173 ESRD patients and 329 individuals with normal kidney function for differences in the genotype distribution of AGT-M235T and REN-A/G(I8-83) polymorphisms between the two groups. The data for cases and controls were compared using the χ(2) test. RESULTS: We found significantly higher levels of serum creatinine and CRP in cases in comparison to controls (p < 0.0001). Data comparison showed a significant association of AGT M235T substitution with ESRD in the dominant model (p = 0.008) and in the comparison of the heterozygous substitution with the homozygous common genotype (p = 0.005). Similarly, REN A/G(I8-83) polymorphism showed a significant difference in the distribution of genotypes between cases and controls (p < 0.038) such that a heterozygous substitution was significantly more common in the ESRD cases in comparison to the homozygous common genotype (p = 0.023). CONCLUSION: We conclude that heterozygous substitutions at the AGT M235T and REN A/G(I8-83) loci correlate significantly with ESRD in a north Indian population.


Subject(s)
Angiotensinogen/genetics , Kidney Failure, Chronic/genetics , Renin/genetics , Amino Acid Substitution , DNA/biosynthesis , DNA/genetics , Gene Frequency , Genes, ras/genetics , Genotype , Humans , India/epidemiology , Kidney Failure, Chronic/epidemiology , Polymorphism, Genetic
3.
Chronobiol Int ; 21(4-5): 553-69, 2004 Jul.
Article in English | MEDLINE | ID: mdl-15470954

ABSTRACT

In some long-lived organisms, particularly in tropical birds and migrants that spend part of the year close to the equator, endogenous circannual rhythms have been demonstrated in seasonal events like reproduction, molt, and migration. These, like the circadian rhythms, are expressed only in constant conditions of illumination with a periodicity deviating from 1 yr. If birds followed this periodicity, they would soon be out of phase with the annual calendar and perish and, therefore, they would need to be synchronized. However, almost nothing is known as to how synchronization is achieved in birds. Herein, with the help of a suitable model, viz., the tropical spotted munia and long-term experiments conducted in series over a 5-yr period, we provide direct evidence for the first time indicating that the segment of annual photocycle with maximal rate of increase prior to vernal equinox (approximately between mid-February and mid-March) synchronizes the circannual reproductive cycle with the monsoon period of ample food supply through a phase delay. Data also indicate, contrary to the prevalent view, that birds in the tropics can perceive minor changes in day-length, that birds respond to progressive changes in day-length as distinct from responding to fixed photoperiods of particular durations, and that birds can actually distinguish the quality of the environmental signal, viz., vernal equinox from early spring, or increasing days of spring from decreasing days of autumn. The underlying mechanisms, although yet to be identified, appear to involve a gonado-inhibitory rather than the conventional gonado-stimulatory response to increasing day-length. The photoperiodic responses of spotted munia are distinctly different from that of any "long-day" birds described thus far and do not conform to the prevalent "circadian coincidence" hypothesis of photoperiodism.


Subject(s)
Passeriformes/physiology , Periodicity , Seasons , Testis/physiology , Animals , Male , Passeriformes/anatomy & histology , Photoperiod , Reproduction/physiology , Testis/anatomy & histology
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