Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 20 de 48
Filter
Add more filters










Publication year range
1.
Microbiol Spectr ; 11(3): e0449522, 2023 06 15.
Article in English | MEDLINE | ID: mdl-37222626

ABSTRACT

The genus Megalocytivirus of the family Iridoviridae is composed of two distinct species, namely, infectious spleen and kidney necrosis virus (ISKNV) and scale drop disease virus (SDDV), and both are important causative agents in a variety of bony fish worldwide. Of them, the ISKNV species is subdivided into three genotypes, namely, red seabream iridovirus (RSIV), ISKNV, and turbot reddish body iridovirus (TRBIV), and a further six subgenotypes, RSIV-I, RSIV-II, ISKNV-I, ISKNV-II, TRBIV-I, and TRBIV-II. Commercial vaccines derived from RSIV-I , RSIV-II and ISKNV-I have been available to several fish species. However, studies regarding the cross-protection effect among different genotype or subgenotype isolates have not been fully elucidated. In this study, RSIV-I and RSIV-II were demonstrated as the causative agents in cultured spotted seabass, Lateolabrax maculatus, through serial robust evidence, including cell culture-based viral isolation, whole-genome determination and phylogeny analysis, artificial challenge, histopathology, immunohistochemistry, and immunofluorescence as well as transmission electron microscope observation. Thereafter, a formalin-killed cell (FKC) vaccine generated from an ISKNV-I isolate was prepared to evaluate the protective effects against two spotted seabass original RSIV-I and RSIV-II. The result showed that the ISKNV-I-based FKC vaccine conferred almost complete cross-protection against RSIV-I and RSIV-II as well as ISKNV-I itself. No serotype difference was observed among RSIV-I, RSIV-II, and ISKNV-I. Additionally, the mandarin fish Siniperca chuatsi is proposed as an ideal infection and vaccination fish species for the study of various megalocytiviral isolates. IMPORTANCE Red seabream iridovirus (RSIV) infects a wide mariculture bony fish and has resulted in significant annual economic loss worldwide. Previous studies showed that the phenotypic diversity of infectious RSIV isolates would lead to different virulence characteristics, viral antigenicity, and vaccine efficacy as well as host range. Importantly, it is still doubted whether a universal vaccine could confer the same highly protective effect against various genotypic isolates. Our study here presented enough experimental evidence that a water in oil (w/o) formation of inactivated ISKNV-I vaccine could confer almost complete protection against RSIV-I and RSIV-II as well as ISKNV-I itself. Our study provides valuable data for better understanding the differential infection and immunity among different genotypes of ISKNV and RSIV isolates in the genus Megalocytivirus.


Subject(s)
Bass , Fish Diseases , Iridoviridae , Iridovirus , Perciformes , Sea Bream , Animals , Iridoviridae/genetics , Vaccines, Inactivated , Fish Diseases/prevention & control
2.
J Fish Dis ; 46(3): 189-199, 2023 Mar.
Article in English | MEDLINE | ID: mdl-36441809

ABSTRACT

Mandarinfish ranavirus (MRV), also known as a variant of largemouth bass virus (LMBV), is an emerging pathogen in mandarinfish aquaculture. In this study, monoclonal antibodies (mAbs) against MRV were produced and characterized, and 7 mAbs were obtained through Western blotting screening and all 7 mAbs specifically recognized MRV/LMBV but not several piscine iridoviruses as ISKNV, GIV and TFV. By LC MS/MS analysis, the recognized viral proteins by seven mAbs were identified as MRV-pORF47L, MRV-pORF55R, MRV-pORF57L, MRV-pORF77L and MRV-pORF78L, respectively, and all five viral proteins are late expression structural proteins by Western blotting. Based on mAb 1C4, immuno-histochemistry and immuno-histo-fluorescence were performed to re-assess the tissue tropism of MRV. The result showed that abundant reactive signals were observed in infected spleen, kidney as well as intestine and pyloric caecum. Real-time quantitative PCR also demonstrated that spleen as well as pyloric caecum and intestines are the major target tissue upon MRV infection. In infected intestines and pyloric caecum, numerous enlarged, multinucleated cells with intracytoplasmic inclusions were identified as the target cells of MRV, suggesting that MRV serves as a digestive tract pathogen to mandarinfish, which may explain why acute infection of MRV can cause the typical clinicopathology featured by severe ascites.


Subject(s)
Bass , Fish Diseases , Iridoviridae , Ranavirus , Animals , Antibodies, Monoclonal , Tandem Mass Spectrometry , Viral Proteins , Cecum
3.
Vaccines (Basel) ; 12(1)2023 Dec 30.
Article in English | MEDLINE | ID: mdl-38250856

ABSTRACT

Cyprinid herpesvirus 2 (CyHV-2) is a pathogen that causes significant losses to the global aquaculture industry due to mass mortality in crucian carp and goldfish. This study demonstrates that the ORF55/ORF57 deletion mutants CyHV-2-Δ55-CP and CyHV-2-Δ57-CP obtained through homologous recombination replicate effectively within the caudal fin of Carassius auratus gibelio (GiCF) cells and exhibit morphologies similar to the CyHV-2 wild-type strain. Both mutants demonstrated a decrease in virulence, with CyHV-2-Δ57-CP exhibiting a more significant reduction. This serves as a reference for the subsequent development of recombinant attenuated vaccines against CyHV-2. Additionally, both mutants expressed the inserted RGNNV-CP (capsid protein of Redspotted grouper nervous necrosis virus) fusion protein gene, and inoculation with CyHV-2-Δ57-CP-infected GiCF cell lysates elicited an antibody response in the grouper. These results indicate that, while ORF55 and ORF57 genes of CyHV-2 are not required for viral replication in vitro, they do play a role in virulence in vivo. Additionally, expression of foreign protein in CyHV-2 suggests that the fully attenuated mutant of CyHV-2 could potentially function as a viral vector for developing subunit vaccines or multivalent recombinant attenuated vaccines.

4.
Fish Shellfish Immunol ; 123: 335-347, 2022 Apr.
Article in English | MEDLINE | ID: mdl-35217194

ABSTRACT

Infectious spleen and kidney necrosis virus (ISKNV), the type species of the genus Megalocytivirus, infects a variety of teleost fish species and causes substantial losses in the aquaculture industry worldwide. ISKNV ORF71L is 1611 bp in length, encodes a 537-amino-acid peptide and was previously identified as a viral structural protein in the ISKNV virion. In this study, the ORF71L deletion mutant virus strain ISKNV-Δ71 was obtained through a homologous recombination approach. The multistep growth curves showed that ISKNV-Δ71 replication was faster than ISKNV-WT replication in mandarin fish fry cells (MFF-1 cells) before 48 h post-infection (hpi). The cumulative mortality of ISKNV-Δ71-infected mandarin fish (Siniperca chuatsi) was lower than that of fish infected with ISKNV-WT. The copy numbers of viral genome equivalents (GEs) in ISKNV-Δ71-infected mandarin fish spleens were also lower than those in ISKNV-WT-infected spleens. Deletion of ORF71L resulted in ISKNV virulence attenuation in mandarin fish. Furthermore, we found that the number of melanomacrophage centers (MMCs) in ISKNV-Δ71-infected mandarin fish spleens was higher than that in ISKNV-WT-infected mandarin fish spleens. Transcriptomic analysis showed that the cytokine-cytokine receptor interaction pathway had the most significant change between ISKNV-Δ71- and ISKNV-WT-infected MFF-1 cells. These results indicated ORF71L is a virulence-related gene of ISKNV. ORF71L could be considered as a potential target for the development of engineered attenuated live vaccines via multigene deletion or as a potential insertion site for exogenous protein expression.


Subject(s)
DNA Virus Infections , Fish Diseases , Iridoviridae , Perciformes , Animals , Fishes/genetics , Fishes/metabolism , Iridoviridae/genetics , Viral Proteins/genetics , Viral Proteins/metabolism , Virulence
5.
Mol Biol Evol ; 39(2)2022 02 03.
Article in English | MEDLINE | ID: mdl-34978575

ABSTRACT

Horizontal gene transfer (HGT) enables the acquisition of novel traits via non-Mendelian inheritance of genetic material. HGT plays a prominent role in the evolution of prokaryotes, whereas in animals, HGT is rare and its functional significance is often uncertain. Here, we investigate horizontally acquired cellulase genes in the free-living nematode model organism Pristionchus pacificus. We show that these cellulase genes 1) are likely of eukaryotic origin, 2) are expressed, 3) have protein products that are secreted and functional, and 4) result in endo-cellulase activity. Using CRISPR/Cas9, we generated an octuple cellulase mutant, which lacks all eight cellulase genes and cellulase activity altogether. Nonetheless, this cellulase-null mutant is viable and therefore allows a detailed analysis of a gene family that was horizontally acquired. We show that the octuple cellulase mutant has associated fitness costs with reduced fecundity and slower developmental speed. Furthermore, by using various Escherichia coli K-12 strains as a model for cellulosic biofilms, we demonstrate that cellulases facilitate the procurement of nutrients from bacterial biofilms. Together, our analysis of cellulases in Pristionchus provides comprehensive evidence from biochemistry, genetics, and phylogeny, which supports the integration of horizontally acquired genes into the complex life history strategy of this soil nematode.


Subject(s)
Cellulases , Gene Transfer, Horizontal , Rhabditida , Animals , Cellulases/genetics , Escherichia coli K12 , Phylogeny , Rhabditida/enzymology , Rhabditida/genetics
6.
Viruses ; 13(8)2021 08 16.
Article in English | MEDLINE | ID: mdl-34452481

ABSTRACT

Scale drop disease virus (SDDV), an emerging piscine iridovirus prevalent in farmed Asian seabass Lates calcarifer in Southeast Asia, was firstly scientifically descripted in Singapore in 2015. Here, an SDDV isolate ZH-06/20 was isolated by inoculating filtered ascites from diseased juvenile yellowfin seabream into MFF-1 cell. Advanced cytopathic effects were observed 6 days post-inoculation. A transmission electron microscopy examination confirmed that numerous virion particles, about 140 nm in diameter, were observed in infected MFF-1 cell. ZH-06/20 was further purified and both whole genome and virion proteome were determined. The results showed that ZH-06/20 was composed of 131,122 bp with 135 putative viral proteins and 113 of them were further detected by virion proteome. Western blot analysis showed that no (or weak) cross-reaction was observed among several major viral proteins between ZH-06/20 and ISKNV-like megalocytivirus. An artificial challenge showed that ZH-06/20 could cause 100% death to juvenile yellowfin seabream. A typical sign was characterized by severe ascites, but not scale drop, which was considerably different from SDD syndrome in Asian seabass. Collectively, SDDV was confirmed, for the first time, as the causative agent of ascites diseases in farmed yellowfin seabream. Our study offers useful information to better understanding SDDV-associated diseases in farmed fish.


Subject(s)
DNA Virus Infections/veterinary , Fish Diseases/virology , Iridovirus/classification , Iridovirus/genetics , Sea Bream/virology , Animals , Ascites/pathology , China , Genome, Viral , Iridoviridae/genetics , Iridovirus/pathogenicity , Iridovirus/ultrastructure , Microscopy, Electron, Transmission , Phylogeny , Proteome , Viral Proteins/genetics , Virion/ultrastructure
7.
Microb Pathog ; 149: 104516, 2020 Dec.
Article in English | MEDLINE | ID: mdl-32971158

ABSTRACT

Pseudomonas plecoglossicida is a highly lethal causative agent associated with severe economic losses in aquaculture industry. P. plecoglossicida has been documented as a highly alarming pathogen in a wide variety of freshwater cultured fish including ayu (Plecoglossus altivelis), rainbow trout (Oncorhynchus mykiss) and pejerrey (Odontesthes bonariensis), and marine cultured fish such as large yellow croaker (Larimichthys crocea) and orange-spotted grouper (Epinephelus coioides) etc. Fish infected with P. plecoglossicida usually exhibited various symptoms, including lethargy, inappetence, disorientation, abdominal swelling with severe ascites and numerous white spots covered on the surface of spleen tissue. In present study, barramundi, zebrafish, spotted seabass and mandarinfish were investigated as potential hosts of P. plecoglossicida. Among them, barramundi was confirmed the most sensitive host fish species for P. plecoglossicida infection. Dynamic histopathology revealed that P. plecoglossicida caused various histopathological effects to barramundi: a) spleen: granulomas appeared at 2 days post infection (dpi) and matured at 4 dpi; b) liver: steatosis at 1 dpi and fat necrosis over time, and damaged the most compared to spleens and metanephros; c) metanephros: Bowman capsule space became larger and glomerulus shrank were even collapsed at 1 dpi; d) ascites: either bacterium or melanin were wrapped in cells from ascites. All these results indicated that P. plecoglossicida could cause systemic diseases with typical clinical sighs to barramundi and would be an alarming pathogen to barramundi industry.


Subject(s)
Fish Diseases , Perciformes , Animals , Pseudomonas , Zebrafish
8.
Org Biomol Chem ; 18(27): 5253-5263, 2020 07 15.
Article in English | MEDLINE | ID: mdl-32614033

ABSTRACT

Comparative ascaroside profiling of Caenorhabditis nematodes using HPLC-ESI-(-)-MS/MS precursor ion scanning revealed a class of highly species-specific ascaroside dimers. Their 2- and 4-isomeric, homo- and heterodimeric structures were identified using a combination of HPLC-ESI-(+)-HR-MS/MS spectrometry and high-resolution dqf-COSY NMR spectroscopy. Structure assignments were confirmed by total synthesis of representative examples. Functional characterization using holding assays indicated that males of Caenorhabditis remanei and Caenorhabditis nigoni are exclusively retained by their conspecific ascaroside dimers, demonstrating that dimerization of conserved monomeric building blocks represents a yet undescribed mechanism that generates species-specific signaling molecules in the Caenorhabditis genus.


Subject(s)
Caenorhabditis elegans/metabolism , Glycolipids/metabolism , Animals , Chromatography, High Pressure Liquid/methods , Dimerization , Magnetic Resonance Spectroscopy/methods , Signal Transduction , Spectrometry, Mass, Electrospray Ionization/methods
9.
Elife ; 92020 04 27.
Article in English | MEDLINE | ID: mdl-32338597

ABSTRACT

The small molecules that mediate chemical communication between nematodes-so-called 'nematode-derived-modular-metabolites' (NDMMs)-are of major interest because of their ability to regulate development, behavior, and life-history. Pristionchus pacificus nematodes produce an impressive diversity of structurally complex NDMMs, some of which act as primer pheromones that are capable of triggering irreversible developmental switches. Many of these NDMMs have only ever been found in P. pacificus but no attempts have been made to study their evolution by profiling closely related species. This study brings a comparative perspective to the biochemical study of NDMMs through the systematic MS/MS- and NMR-based analysis of exo-metabolomes from over 30 Pristionchus species. We identified 36 novel compounds and found evidence for the convergent evolution of complex NDMMs in separate branches of the Pristionchus phylogeny. Our results demonstrate that biochemical innovation is a recurrent process in Pristionchus nematodes, a pattern that is probably typical across the animal kingdom.


Subject(s)
Evolution, Molecular , Nematoda/chemistry , Nematoda/genetics , Pheromones/genetics , Phylogeny , Animals , Pheromones/classification , Sequence Alignment , Species Specificity
10.
Org Lett ; 21(24): 9889-9892, 2019 12 20.
Article in English | MEDLINE | ID: mdl-31809061

ABSTRACT

A species-specific ascaroside-type glycolipid was identified in the nematode Caenorhabditis nigoni using HPLC-ESI-(-)-MS/MS precursor ion scanning, HR-MS/MS, and NMR techniques. Its structure containing an l-3,6-dideoxy-lyxo-hexose unit was established by total synthesis. The identification of this novel 4-epi-ascaroside (caenorhabdoside) in C. nigoni along with the previous identification of 2-epi-ascarosides (paratosides) in Pristionchus pacificus indicate that nematodes can generate highly specific signaling molecules by epimerization of the ascarylose building block downstream of the canonical ß-oxidation cycle.


Subject(s)
Caenorhabditis/chemistry , Caenorhabditis/metabolism , Glycolipids/chemistry , Glycolipids/metabolism , Animals , Carbohydrate Conformation , Oxidation-Reduction
11.
Org Lett ; 21(15): 5832-5837, 2019 08 02.
Article in English | MEDLINE | ID: mdl-31305087

ABSTRACT

A novel class of species-specific modular ascarosides that integrate additional fatty acid building blocks was characterized in the nematode Caenorhabditis remanei using a combination of HPLC-ESI-(-)-MS/MS precursor ion scanning, microreactions, HR-MS/MS, MSn, and NMR techniques. The structure of the dominating component carrying a cyclopropyl fatty acid moiety was established by total synthesis. Biogenesis of this female-produced male attractant depends on cyclopropyl fatty acid synthase (cfa), which is expressed in bacteria upon entering their stationary phase.


Subject(s)
Bacteria/metabolism , Caenorhabditis/metabolism , Fatty Acids/metabolism , Glycolipids/metabolism , Methyltransferases/metabolism , Signal Transduction/physiology , Animals , Chromatography, High Pressure Liquid/methods , Female , Magnetic Resonance Spectroscopy/methods , Male
12.
Fish Shellfish Immunol ; 86: 143-151, 2019 Mar.
Article in English | MEDLINE | ID: mdl-30453046

ABSTRACT

Vibrio harveyi is a serious pathogen of scale drop and muscle necrosis disease in marine commercial fishes. Adhesion to and colonization of the host cells surfaces is the first and crucial step for pathogenic bacterial infection, which is usually mediated by outer membrane proteins (Omps). The objectives of this study were to identify the major adhesin in Omps that plays the essential role in adhesion of V. harveyi to the host cells, and to assess the potential of this adhesin as a vaccine candidate for V. harveyi infection. We observed that pathogenic V. harveyi adhered to the surface of grouper embryonic cells (GEM cells) and induced apoptosis of them. Native Omps were extracted from nine different V. harveyi strains, and five common Omp bands were isolated by SDS-PAGE analysis. Western blot analysis and an anti-native Omp antibodies blocking assay indicated that one strong and several weak immunoreactivity Omps bands presence. Next, a total of five Omps, including TolC, Agg (Agglutination protein), Omp47, Fla (Flagellin), and OmpW, were identified and their encoding genes were cloned, characterized, and expressed in E. coli. The purified recombinant TolC could competitively inhibit the invasion of V. harveyi to GEM cells in vitro, and anti-TolC antibody also could significantly block the adhesion of V. harveyi to GEM cells. When used to immunize hybrid groupers, the recombinant TolC could confer significant protection to fish against experimental V. harveyi challenge. These data suggested that outer membrane protein TolC functions as a major adhesin in V. harveyi and could be a potential vaccine candidate for V. harveyi infection.


Subject(s)
Adhesins, Bacterial , Bacterial Outer Membrane Proteins/physiology , Bacterial Vaccines/immunology , Fishes , Vibrio Infections/veterinary , Vibrio/classification , Animals , Cloning, Molecular , Phylogeny , Vibrio Infections/microbiology , Vibrio Infections/prevention & control
13.
Elife ; 72018 08 28.
Article in English | MEDLINE | ID: mdl-30152755

ABSTRACT

High-through-put (HTP) screening for functional arbuscular mycorrhizal fungi (AMF)-associations is challenging because roots must be excavated and colonization evaluated by transcript analysis or microscopy. Here we show that specific leaf-metabolites provide broadly applicable accurate proxies of these associations, suitable for HTP-screens. With a combination of untargeted and targeted metabolomics, we show that shoot accumulations of hydroxy- and carboxyblumenol C-glucosides mirror root AMF-colonization in Nicotiana attenuata plants. Genetic/pharmacologic manipulations indicate that these AMF-indicative foliar blumenols are synthesized and transported from roots to shoots. These blumenol-derived foliar markers, found in many di- and monocotyledonous crop and model plants (Solanum lycopersicum, Solanum tuberosum, Hordeum vulgare, Triticum aestivum, Medicago truncatula and Brachypodium distachyon), are not restricted to particular plant-AMF interactions, and are shown to be applicable for field-based QTL mapping of AMF-related genes.


Subject(s)
Cyclohexanones/metabolism , Mycorrhizae/metabolism , Plant Shoots/metabolism , Symbiosis , Biomarkers/metabolism , Cyclohexanones/chemistry , Genes, Plant , High-Throughput Screening Assays , Metabolomics , Mycorrhizae/growth & development , Plant Leaves/metabolism , RNA, Messenger/genetics , RNA, Messenger/metabolism , Stress, Physiological , Time Factors , Nicotiana/genetics , Nicotiana/metabolism , Nicotiana/microbiology
14.
Vet Res ; 49(1): 40, 2018 05 02.
Article in English | MEDLINE | ID: mdl-29716648

ABSTRACT

Cyprinid herpesvirus 3 (CyHV-3) is the archetypal fish alloherpesvirus and the etiologic agent of a lethal disease in common and koi carp. To date, the genome sequences of only four CyHV-3 isolates have been published, but no comparisons of the biologic properties of these strains have been reported. We have sequenced the genomes of a further seven strains from various geographical sources, and have compared their growth in vitro and virulence in vivo. The major findings were: (i) the existence of the two genetic lineages previously described as European and Asian was confirmed, but inconsistencies between the geographic origin and genotype of some strains were revealed; (ii) potential inter-lineage recombination was detected in one strain, which also suggested the existence of a third, as yet unidentified lineage; (iii) analysis of genetic disruptions led to the identification of non-essential genes and their potential role in virulence; (iv) comparison of the in vitro and in vivo properties of strains belonging to the two lineages revealed that inter-lineage polymorphisms do not contribute to the differences in viral fitness observed; and (v) a negative correlation was observed among strains between viral growth in vitro and virulence in vivo. This study illustrates the importance of coupling genomic and biologic comparisons of viral strains in order to enhance understanding of viral evolution and pathogenesis.


Subject(s)
Carps , Fish Diseases/virology , Genome, Viral , Herpesviridae Infections/veterinary , Herpesviridae/genetics , Herpesviridae/pathogenicity , Animals , Herpesviridae/growth & development , Herpesviridae Infections/virology , Virulence , Whole Genome Sequencing/veterinary
15.
J Org Chem ; 83(13): 7109-7120, 2018 07 06.
Article in English | MEDLINE | ID: mdl-29480728

ABSTRACT

Chemical communication in nematodes such as the model organism Caenorhabditis elegans is modulated by a variety of glycosides based on the dideoxysugar l-ascarylose. Comparative ascaroside profiling of nematode exometabolome extracts using a GC-EIMS screen reveals that several basic components including ascr#1 (asc-C7), ascr#2 (asc-C6-MK), ascr#3 (asc-ΔC9), ascr#5 (asc-ωC3), and ascr#10 (asc-C9) are highly conserved among the Caenorhabditis. Three novel side chain hydroxylated ascaroside derivatives were exclusively detected in the distantly related C. nigoni and C. afra. Molecular structures of these species-specific putative signaling molecules were elucidated by NMR spectroscopy and confirmed by total synthesis and chemical correlations. Biological activities were evaluated using attraction assays. The identification of (ω)- and (ω - 2)-hydroxyacyl ascarosides demonstrates how GC-EIMS-based ascaroside profiling facilitates the detection of novel ascaroside components and exemplifies how species-specific hydroxylation of ascaroside aglycones downstream of peroxisomal ß-oxidation increases the structural diversity of this highly conserved class of nematode signaling molecules.


Subject(s)
Caenorhabditis elegans/metabolism , Gas Chromatography-Mass Spectrometry/methods , Peroxisomes/metabolism , Spectrometry, Mass, Electrospray Ionization/methods , Animals , Hydroxylation , Magnetic Resonance Spectroscopy/methods , Oxidation-Reduction
16.
Anal Chem ; 89(19): 10570-10577, 2017 10 03.
Article in English | MEDLINE | ID: mdl-28866881

ABSTRACT

Nematodes such as the model organism Caenorhabditis elegans produce various homologous series of l-ascarylose-derived glycolipids called ascarosides, which include several highly potent signals in intra and interspecies communication as well as cross-kingdom interactions. Given their low concentrations and large number of structurally similar components, mass spectrometric screens based on high-performance liquid chromatography-electrospray ionization-tandem mass spectrometry (HPLC-ESI-MS/MS) are commonly employed for ascaroside detection and quantification. Here, we describe a complementary gas chromatography-electron ionization mass spectrometry (GC-EIMS) screen that utilizes an ascarylose-derived K1-fragment ion signal at m/z 130.1 [C6H14OSi]+● to highlight known as well as yet unidentified ascaroside components in TMS-derivatized crude nematode exometabolome extracts. GC-EIMS-based ascaroside profiling of wild-type and mutant C. elegans facilitates the analysis of all basic ascarosides using the same ionization technique while providing excellent resolution for the complete homologous series with side chains ranging from 3 to 33 carbons. Combined screening for m/z 130.1 along with side chain-specific J1 [M - 173]+ and J2 [M - 291]+ fragment ions, as well as additional characteristic marker ions from α-cleavage, enables convenient structure assignment of ca. 200 components from wild-type and peroxisomal ß-oxidation mutants including (ω - 1)-linked acyl, enoyl, ß-hydroxyacyl, and 2-ketoalkyl ascarosides along with their (ω)-linked or α-methyl isomers and ethanolamide derivatives, as well as 2-hydroxyalkyl ascarosides. Given the widespread availability of GC-MS and its increasing popularity in metabolomics, this method will promote the identification of ascarosides in C. elegans and other nematodes.


Subject(s)
Caenorhabditis elegans/metabolism , Gas Chromatography-Mass Spectrometry/methods , Glycolipids/analysis , Metabolome , Animals , Glycolipids/metabolism , Metabolomics
17.
Vet Microbiol ; 203: 28-33, 2017 May.
Article in English | MEDLINE | ID: mdl-28619157

ABSTRACT

A novel ranavirus with features similar to largemouth bass virus (LMBV) was isolated and then characterized from a natural mass mortality of adult hybrid mandarin (Siniperca scherzeri×Siniperca chuatsi). The isolated LMBV-like iridovirus was designated as mandarin ranavirus (MRV)-GD1301. The results of artificial infection showed that MRV-GD1301 was highly virulent to hybrid mandarin juveniles, and 100% mortality was observed within 5days after infection via intraperitoneal injection. Moribund fishes typically have abnormally swollen abdomens with extremely severe ascites and exhibit exophthalmia. The characteristic clinical signs have been rarely recorded in other LMBV-associated fish diseases and other viral diseases in mandarin aquaculture. In contrast to the high lethality in hybrid mandarin, MRV-GD1301 showed avirulence to koi Cyprinus carpio, a susceptible fish species to LMBV-like koi ranavirus (KIRV) found recently in India. Our findings suggest that MRV is an emerging causative agent of mass mortality in mandarin species.


Subject(s)
DNA Virus Infections/veterinary , Fish Diseases/virology , Ranavirus/isolation & purification , Animals , Aquaculture , China/epidemiology , DNA Virus Infections/epidemiology , DNA Virus Infections/virology , Fish Diseases/epidemiology , Fish Diseases/pathology , Perciformes
18.
Gene ; 592(1): 154-163, 2016 Oct 30.
Article in English | MEDLINE | ID: mdl-27476971

ABSTRACT

MicroRNAs (miRNAs) are small non-coding RNAs with approximately 22 nucleotides (nt) that are encoded by a diverse range of metazoan eukaryotes, plants and viruses. CyHV-3 (cyprinid herpesvirus-3) is a member of the Alloherpesviridae virus family and has caused severe economic losses for the common carp and koi carp fishery industries. In this study, a total of 15,987,652 clean reads were generated from a cDNA library of CyHV-3-infected KCF-1 (koi caudal fin) cells using high-throughput sequencing technology. Following annotation and secondary structure prediction, 28 miRNAs were identified as novel candidate miRNAs encoded by common carp (Cyprinus carpio), and seven miRNAs were shown to be encoded by CyHV-3. Next, 19 host miRNAs and seven viral miRNAs were validated by stem-loop real-time PCR. Northern blot analysis confirmed the presence of 14 host miRNAs and five CyHV-3-encoded novel miRNAs. The results of this study expand the knowledge of common carp and CyHV-3 microRNAs and provide a useful theoretical foundation for further study of CyHV-3.


Subject(s)
Carps/genetics , Herpesviridae/genetics , MicroRNAs/genetics , RNA, Viral/genetics , Animals , Carps/virology , Cell Line , Fish Diseases/genetics , Fish Diseases/virology , Herpesviridae/pathogenicity
19.
Org Biomol Chem ; 14(30): 7217-25, 2016 Aug 14.
Article in English | MEDLINE | ID: mdl-27381649

ABSTRACT

The indole ascarosides (icas) represent a highly potent class of nematode-derived modular signalling components that integrate structural inputs from amino acid, carbohydrate, and fatty acid metabolism. Comparative analysis of the crude exo-metabolome of hermaphroditic Caenorhabditis briggsae using a highly sensitive mass spectrometric screen reveals an indole ascaroside blend dominated by two new components. The structures of isolated icas#2 and icas#6.2 were determined by NMR spectroscopy and confirmed by total synthesis and chemical correlation. Low atto- to femtomolar amounts of icas#2 and icas#6.2 act in synergism to attract males indicating a function as sex pheromone. Comparative analysis of 14 Caenorhabditis species further demonstrates that species-specific indole ascaroside biosynthesis is highly conserved in the Elegans group. Functional characterization of the dominating indole ascarosides icas#2, icas#3, and icas#9 reveals a high degree of species-specificity and considerable variability with respect to gender-specificity, thus, confirming that indole ascarosides modulate different biological functions within the Elegans group. Although the nematode response was usually most pronounced towards conspecific signals, Caenorhabditis brenneri, the only species of the Elegans group that does not produce any indole ascarosides, exhibits a robust response to icas#2 suggesting the potential for interspecies interactions.


Subject(s)
Caenorhabditis/chemistry , Glycosides/metabolism , Indoles/metabolism , Sex Attractants/analysis , Signal Transduction , Animals , Glycosides/chemistry , Indoles/chemistry , Mass Spectrometry , Molecular Conformation , Species Specificity
20.
Fish Shellfish Immunol ; 49: 407-19, 2016 Feb.
Article in English | MEDLINE | ID: mdl-26748344

ABSTRACT

Autophagy of five vertebrate iridoviruses, including one megalocytivirus (infectious spleen and kidney necrosis virus, ISKNV) and four ranaviruses (Chinese giant salamander iridovirus, CGSIV; Tiger frog virus, TFV; Grouper iridovirus, GIV; and Largemouth bass virus, LMBV) were investigated in a common, highly permissive mandarinfish fry (MFF-1) cell model. The results showed marked autophagosome formation in GIV- and LMBV-infected cells but not in ISKNV-, CGSIV- and TFV-infected MFF-1 cells. Strong evidence for the autophagosomes was provided by transmission electron microscopy, the detection of mandarinfish microtubule-associated protein 1 light chain 3B (mLC3)-based fluorescent dot formation and mLC3-I/mLC3-II conversion was provided by Western blotting. Pharmacological tests indicated that autophagy plays an antiviral role during GIV or LMBV infection. Collectively, our data are the first to show that antiviral autophagic effects can be triggered by GIV and LMBV but not by ISKNV, TFV and CGSIV in a common susceptible cell model. These results suggest that differential host-virus interaction strategies may be utilized against different vertebrate iridoviruses; they also indicate the potential effectiveness of an antiviral treatment that modulates autophagy to control iridoviral infections, such as GIV and LMBV.


Subject(s)
Autophagy , DNA Virus Infections/veterinary , Fish Diseases/immunology , Iridovirus/immunology , Perciformes , Animals , Cell Line , DNA Virus Infections/immunology , DNA Virus Infections/virology , Fish Diseases/virology
SELECTION OF CITATIONS
SEARCH DETAIL