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1.
Br J Cancer ; 119(4): 462-470, 2018 08.
Article in English | MEDLINE | ID: mdl-30057405

ABSTRACT

BACKGROUND: New approaches to ovarian cancer are needed to improve survival. Wilms' tumour 1 (WT1) is a tumour-associated antigen expressed in many ovarian cancers. P53 is also often altered. The clinical significance of the combined expression of these two transcription factors has not been studied. METHODS: One hundred ninety-six ovarian tumours were classified histopathologically. Tumours were stained for WT1 and p53 immunohistochemically. Stains were analysed according to tumour type, grade and FIGO stage. Kaplan-Meier analyses on 96 invasive carcinomas determined whether categorical variables were related to survival. RESULTS: WT1 and p53 were related to ovarian tumour type, grade, FIGO stage and patient survival. Uniform nuclear p53 expression was associated with invasion and WT1 expression was associated with advanced grade, FIGO stage and poor survival. When WT1 and p53 were both in the age-adjusted Cox model, WT1 was significant while p53 was not. When we combined tumours expressing WT1 and p53, then adjusted for age and tumour subtype, the hazard ratio compared to tumours without WT1 and with normal p53 was 2.70; when adjusted for age and FIGO stage, the hazard ratio was 2.40. CONCLUSIONS: WT1, an antigen target, is a biomarker for poor prognosis, particularly when combined with altered p53.


Subject(s)
Biomarkers, Tumor/metabolism , Cell Nucleus/metabolism , Ovarian Neoplasms/pathology , Tumor Suppressor Protein p53/metabolism , Up-Regulation , WT1 Proteins/metabolism , Age Factors , Aged , Female , Gene Expression Regulation, Neoplastic , Humans , Kaplan-Meier Estimate , Middle Aged , Neoplasm Grading , Neoplasm Invasiveness , Neoplasm Staging , Ovarian Neoplasms/metabolism , Prognosis , Retrospective Studies
2.
J Nutr ; 148(suppl_2): 1413S-1421S, 2018 08 01.
Article in English | MEDLINE | ID: mdl-31505677

ABSTRACT

OBJECTIVE: We describe the purpose of the Dietary Supplement Ingredient Database (DSID), the statistical methodology underlying online calculators of analytically verified supplement content estimates, and the application and significance of DSID label adjustments in nutritional epidemiology. BACKGROUND AND HISTORY: During dietary supplement (DS) manufacturing, many ingredients are added at higher than declared label amounts, but overages are not standardized among manufacturers. As a result, researchers may underestimate nutrient intakes from DSs. The DSID provides statistical tools on the basis of the results of chemical analysis to convert label claims into analytically predicted ingredient amounts. These adjustments to labels are linked to DS products reported in NHANES. RATIONALE: Tables summarizing the numbers of NHANES DS products with ingredient overages and below label content show the importance of DSID adjustments to labels for accurate intake calculations. RECENT DEVELOPMENTS: We show the differences between analytically based estimates and labeled content for vitamin D, calcium, iodine, caffeine, and omega-3 (n-3) fatty acids and their potential impact on the accuracy of intake assessments in large surveys. Analytical overages >20% of label levels are predicted for several nutrients in 50-99% of multivitamin-mineral products (MVMs) reported in NHANES: for iodine and selenium in adult MVMs, for iodine and vitamins D and E in children's MVMs, and for iodine, chromium, and potassium in nonprescription prenatal MVMs. Predicted overages of 10-20% for calcium can be applied to most MVMs and overages >10% for folic acid in the vast majority of adult and children's MVMs. FUTURE DIRECTIONS: DSID studies are currently evaluating ingredient levels in prescription prenatal MVMs and levels of constituents in botanical DSs. CONCLUSIONS: We estimate that the majority of MVM products reported in NHANES have significant overages for several ingredients. It is important to account for nonlabeled additional nutrient exposure from DSs to better evaluate nutritional status in the United States.


Subject(s)
Databases, Factual , Dietary Supplements/analysis , Dietary Supplements/standards , Food Labeling/standards , Humans , Laboratories , Minerals/administration & dosage , Minerals/analysis , Minerals/standards , Nutrition Surveys , Quality Control , United States , Vitamins/administration & dosage , Vitamins/analysis , Vitamins/standards
3.
Am J Clin Nutr ; 105(2): 526-539, 2017 02.
Article in English | MEDLINE | ID: mdl-27974309

ABSTRACT

BACKGROUND: Multivitamin/mineral products (MVMs) are the dietary supplements most commonly used by US adults. During manufacturing, some ingredients are added in amounts exceeding the label claims to compensate for expected losses during the shelf life. Establishing the health benefits and harms of MVMs requires accurate estimates of nutrient intake from MVMs based on measures of actual rather than labeled ingredient amounts. OBJECTIVES: Our goals were to determine relations between analytically measured and labeled ingredient content and to compare adult MVM composition with Recommended Dietary Allowances (RDAs) and Tolerable Upper Intake Levels. DESIGN: Adult MVMs were purchased while following a national sampling plan and chemically analyzed for vitamin and mineral content with certified reference materials in qualified laboratories. For each ingredient, predicted mean percentage differences between analytically obtained and labeled amounts were calculated with the use of regression equations. RESULTS: For 12 of 18 nutrients, most products had labeled amounts at or above RDAs. The mean measured content of all ingredients (except thiamin) exceeded labeled amounts (overages). Predicted mean percentage differences exceeded labeled amounts by 1.5-13% for copper, manganese, magnesium, niacin, phosphorus, potassium, folic acid, riboflavin, and vitamins B-12, C, and E, and by ∼25% for selenium and iodine, regardless of labeled amount. In contrast, thiamin, vitamin B-6, calcium, iron, and zinc had linear or quadratic relations between the labeled and percentage differences, with ranges from -6.5% to 8.6%, -3.5% to 21%, 7.1% to 29.3%, -0.5% to 16.4%, and -1.9% to 8.1%, respectively. Analytically adjusted ingredient amounts are linked to adult MVMs reported in the NHANES 2003-2008 via the Dietary Supplement Ingredient Database (http://dsid.usda.nih.gov) to facilitate more accurate intake quantification. CONCLUSIONS: Vitamin and mineral overages were measured in adult MVMs, most of which already meet RDAs. Therefore, nutrient overexposures from supplements combined with typical food intake may have unintended health consequences, although this would require further examination.


Subject(s)
Dietary Supplements , Micronutrients/analysis , Trace Elements/analysis , Vitamins/analysis , Adult , Female , Humans , Linear Models , Male , Nutrition Surveys , Quality Control , Recommended Dietary Allowances , Reproducibility of Results
4.
Cancer Res ; 76(9): 2573-86, 2016 05 01.
Article in English | MEDLINE | ID: mdl-27197264

ABSTRACT

Treatment of metastatic gastric cancer typically involves chemotherapy and monoclonal antibodies targeting HER2 (ERBB2) and VEGFR2 (KDR). However, reliable methods to identify patients who would benefit most from a combination of treatment modalities targeting the tumor stroma, including new immunotherapy approaches, are still lacking. Therefore, we integrated a mouse model of stromal activation and gastric cancer genomic information to identify gene expression signatures that may inform treatment strategies. We generated a mouse model in which VEGF-A is expressed via adenovirus, enabling a stromal response marked by immune infiltration and angiogenesis at the injection site, and identified distinct stromal gene expression signatures. With these data, we designed multiplexed IHC assays that were applied to human primary gastric tumors and classified each tumor to a dominant stromal phenotype representative of the vascular and immune diversity found in gastric cancer. We also refined the stromal gene signatures and explored their relation to the dominant patient phenotypes identified by recent large-scale studies of gastric cancer genomics (The Cancer Genome Atlas and Asian Cancer Research Group), revealing four distinct stromal phenotypes. Collectively, these findings suggest that a genomics-based systems approach focused on the tumor stroma can be used to discover putative predictive biomarkers of treatment response, especially to antiangiogenesis agents and immunotherapy, thus offering an opportunity to improve patient stratification. Cancer Res; 76(9); 2573-86. ©2016 AACR.


Subject(s)
Stomach Neoplasms/classification , Stomach Neoplasms/genetics , Transcriptome/genetics , Tumor Microenvironment/genetics , Animals , Biomarkers, Tumor/analysis , Biomarkers, Tumor/genetics , Computational Biology/methods , Disease Models, Animal , Gene Expression Profiling/methods , Heterografts , Humans , Image Processing, Computer-Assisted , Immunohistochemistry , Mice , Neovascularization, Pathologic/genetics , Oligonucleotide Array Sequence Analysis , Tissue Array Analysis , Vascular Endothelial Growth Factor A/metabolism
5.
Br J Cancer ; 114(4): 444-53, 2016 02 16.
Article in English | MEDLINE | ID: mdl-26882068

ABSTRACT

BACKGROUND: Melanoma is a disease that primarily arises in the skin but is a derivative of the neural crest. Eukaryotic translation initiation factor 4E (eIF4E) regulates translation of multiple malignancy-associated mRNAs and is overexpressed in many epithelial tumours. However, expression in human tumours derived from the neural crest is unknown. Here, we determined the association of eIF4E and phospho-eIF4E expression in melanocytic lesions with malignant conversion, metastatic potential and patient survival. METHODS: Archived formalin-fixed, paraffin-embedded surgical specimens from 114 patients with melanocytic lesions were stained immunohistochemically for eIF4E and phospho-eIF4E and evaluated semiquantitatively. The relationship between cytoplasmic and nuclear eIF4E and phospho-eIF4E protein expression, melanocytic lesion subtype and tumour progression was determined. Kaplan-Meier survival analyses and Cox proportional hazard regression were performed. RESULTS: Increased eIF4E and phospho-eIF4E expression was highly associated with malignancy (P<0.0001). High nuclear phospho-eIF4E was associated with synchronous or future metastasis (P=0.0059). Kaplan-Meier analyses demonstrated highly significant associations between high histoscores for cytoplasmic and nuclear phospho-eIF4E and reduced survival in all patients (P=0.0003 and 0.0009, respectively). CONCLUSIONS: Increased melanoma expression of eIF4E and phospho-eIF4E is associated with metastatic potential, reduced survival and increased risk of death.


Subject(s)
Biomarkers, Tumor/metabolism , Eukaryotic Initiation Factor-4E/metabolism , Melanoma/metabolism , Serine/metabolism , Adult , Disease Progression , Female , Humans , Immunohistochemistry , Kaplan-Meier Estimate , Male , Melanoma/mortality , Melanoma/pathology , Phosphorylation , Retrospective Studies
6.
Behav Processes ; 83(1): 16-22, 2010 Jan.
Article in English | MEDLINE | ID: mdl-19733638

ABSTRACT

The goal of this study was to determine the impact of enclosure size on space use and movement patterns of domestic fowl (Gallus gallus domesticus), independent of group size and density. Research designed to estimate the effects of group size, density, or enclosure size involves inherent confounding between factors, clouding their individual effects. This experimental design enabled us to conduct multiple contrasts in order to tease apart the specific impacts. Treatments consisted of five combinations of three square enclosures: small (S; 1.5m(2)), medium (M; 3.0m(2)), and large (L; 4.5m(2)), and three group sizes of 10, 20, and 30 birds. We made comparisons while holding group size constant, holding density constant, and the third while maintaining a constant enclosure size. Nearest neighbor distances increased with enclosure size but appeared to be constrained by density. Net displacement and minimum convex polygons increased with enclosure size regardless of group size or density. We found no evidence of social restriction on space use. Results indicate that broilers adapted their use of space and movement patterns to the size of the enclosures, spreading out and utilizing a greater amount of space when it was available.


Subject(s)
Behavior, Animal , Movement , Social Environment , Spatial Behavior , Animals , Chickens , Male , Population Density , Sample Size
7.
Cancer Res ; 69(9): 3866-73, 2009 May 01.
Article in English | MEDLINE | ID: mdl-19383915

ABSTRACT

Elevated eukaryotic translation initiation factor 4E (eIF4E) function induces malignancy in experimental models by selectively enhancing translation of key malignancy-related mRNAs (c-myc and BCL-2). eIF4E activation may reflect increased eIF4E expression or phosphorylation of its inhibitory binding proteins (4E-BP). By immunohistochemical analyses of 148 tissues from 89 prostate cancer patients, we now show that both eIF4E expression and 4E-BP1 phosphorylation (p4E-BP1) are increased significantly, particularly in advanced prostate cancer versus benign prostatic hyperplasia tissues. Further, increased eIF4E and p4E-BP1 levels are significantly related to reduced patient survival, whereas uniform 4E-BP1 expression is significantly related to better patient survival. Both immunohistochemistry and Western blotting reveal that elevated eIF4E and p4E-BP1 are evident in the same prostate cancer tissues. In two distinct prostate cancer cell models, the progression to androgen independence also involves increased eIF4E activation. In these prostate cancer cells, reducing eIF4E expression with an eIF4E-specific antisense oligonucleotide currently in phase I clinical trials robustly induces apoptosis, regardless of cell cycle phase, and reduces expression of the eIF4E-regulated proteins BCL-2 and c-myc. Collectively, these data implicate eIF4E activation in prostate cancer and suggest that targeting eIF4E may be attractive for prostate cancer therapy.


Subject(s)
Eukaryotic Initiation Factor-4E/biosynthesis , Prostatic Neoplasms/metabolism , Adaptor Proteins, Signal Transducing/metabolism , Apoptosis/physiology , Cell Cycle/physiology , Cell Cycle Proteins , Cell Line, Tumor , Disease Progression , Eukaryotic Initiation Factor-4E/genetics , Humans , Immunohistochemistry , Male , Oligonucleotides, Antisense/genetics , Phosphoproteins/metabolism , Phosphorylation , Prostatic Neoplasms/pathology , Proto-Oncogene Proteins c-bcl-2/biosynthesis , Proto-Oncogene Proteins c-bcl-2/metabolism , Proto-Oncogene Proteins c-myc/metabolism
8.
J Appl Physiol (1985) ; 103(5): 1678-87, 2007 Nov.
Article in English | MEDLINE | ID: mdl-17761791

ABSTRACT

To examine the influence of insulin-like growth factor (IGF) pathway gene polymorphisms on muscle mass and strength responses to strength training (ST), we studied 128 White and Black men and women before and after a 10-wk single-leg knee extension ST program. One-repetition maximum strength, muscle volume (MV) via computed tomography, and muscle quality (MQ) were assessed at baseline and after 10 wk of ST. There was a significant combined IGF1 cytosine adenine (CA) repeat gene effect, which included both the IGF1 CA repeat main effect and IGF1 CA repeat x PPP3R1 insertion-deletion (I/D) gene x gene interaction effect, on the changes in strength (P < 0.01) and MQ (P < 0.05) with ST. There was a trend for a significant gene x gene interaction between IGF1 CA repeat and PPP3R1 I/D for changes in strength (P = 0.07) and MQ (P = 0.06) with ST. The influence of the PPP3R1 A-202C gene polymorphism on change in MV with ST approached significance (P = 0.06). The IGF1 CA repeat polymorphism had a significant influence on the change in strength and MV combined with ST (P < 0.05), whereas the influence of the PPP3R1 I/D polymorphism approached significance (P = 0.08). There were no associations between the IGFBP3 A-202C gene polymorphism and the muscle phenotypic responses to ST. These data suggest that two of the three IGF pathway gene polymorphisms identified in this study influence muscle phenotypic responses to ST in both black and white older men and women.


Subject(s)
Aging/genetics , Exercise/physiology , Insulin-Like Growth Factor I/genetics , Muscle Contraction , Muscle, Skeletal/metabolism , Phosphoprotein Phosphatases/genetics , Polymorphism, Genetic , Promoter Regions, Genetic , Black or African American/genetics , Age Factors , Aged , Aged, 80 and over , Calcineurin , Dinucleotide Repeats , Female , Gene Frequency , Genotype , Humans , Insulin-Like Growth Factor Binding Protein 3 , Insulin-Like Growth Factor Binding Proteins/genetics , Insulin-Like Growth Factor Binding Proteins/metabolism , Insulin-Like Growth Factor I/metabolism , Male , Middle Aged , Muscle Strength , Muscle, Skeletal/diagnostic imaging , Phenotype , Phosphoprotein Phosphatases/metabolism , Sex Factors , Time Factors , Tomography, X-Ray Computed , White People/genetics
9.
J Clin Invest ; 117(9): 2638-48, 2007 Sep.
Article in English | MEDLINE | ID: mdl-17786246

ABSTRACT

Expression of eukaryotic translation initiation factor 4E (eIF4E) is commonly elevated in human and experimental cancers, promoting angiogenesis and tumor growth. Elevated eIF4E levels selectively increase translation of growth factors important in malignancy (e.g., VEGF, cyclin D1) and is thereby an attractive anticancer therapeutic target. Yet to date, no eIF4E-specific therapy has been developed. Herein we report development of eIF4E-specific antisense oligonucleotides (ASOs) designed to have the necessary tissue stability and nuclease resistance required for systemic anticancer therapy. In mammalian cultured cells, these ASOs specifically targeted the eIF4E mRNA for destruction, repressing expression of eIF4E-regulated proteins (e.g., VEGF, cyclin D1, survivin, c-myc, Bcl-2), inducing apoptosis, and preventing endothelial cells from forming vessel-like structures. Most importantly, intravenous ASO administration selectively and significantly reduced eIF4E expression in human tumor xenografts, significantly suppressing tumor growth. Because these ASOs also target murine eIF4E, we assessed the impact of eIF4E reduction in normal tissues. Despite reducing eIF4E levels by 80% in mouse liver, eIF4E-specific ASO administration did not affect body weight, organ weight, or liver transaminase levels, thereby providing the first in vivo evidence that cancers may be more susceptible to eIF4E inhibition than normal tissues. These data have prompted eIF4E-specific ASO clinical trials for the treatment of human cancers.


Subject(s)
Eukaryotic Initiation Factor-4E/metabolism , Gene Expression Regulation, Neoplastic , Neoplasms/metabolism , Neoplasms/therapy , Protein Biosynthesis/genetics , Animals , Apoptosis , Base Sequence , Cells, Cultured , Endothelial Cells/metabolism , Eukaryotic Initiation Factor-4E/genetics , Humans , Mice , Neoplasms/blood supply , Neoplasms/pathology , Xenograft Model Antitumor Assays
10.
Anal Bioanal Chem ; 389(1): 231-9, 2007 Sep.
Article in English | MEDLINE | ID: mdl-17676317

ABSTRACT

As part of a study initiating the development of an analytically validated Dietary Supplement Ingredient Database (DSID) in the United States (US), a selection of dietary supplement products were analyzed for their caffeine content. Products sold as tablets, caplets, or capsules and listing at least one caffeine-containing ingredient (including botanicals such as guarana, yerba mate, kola nut, and green tea extract) on the label were selected for analysis based on market share information. Two or three lots of each product were purchased and analyzed using high-pressure liquid chromatography (HPLC). Each analytical run included one or two National Institute of Standards and Technology (NIST) Standard Reference Materials (SRMs) and two products in duplicate. Caffeine intake per serving and per day was calculated using the maximum recommendations on each product label. Laboratory analysis for 53 products showed product means ranging from 1 to 829 mg caffeine/day. For products with a label amount for comparison (n = 28), 89% (n = 25) of the products had analytically based caffeine levels/day of between -16% and +16% of the claimed levels. Lot-to-lot variability (n = 2 or 3) for caffeine in most products (72%) was less than 10%.


Subject(s)
Caffeine/analysis , Dietary Supplements/analysis , Food Analysis , Quality Control , United States
11.
J Gerontol A Biol Sci Med Sci ; 62(6): 658-63, 2007 Jun.
Article in English | MEDLINE | ID: mdl-17595424

ABSTRACT

BACKGROUND: There is little information regarding the effects of strength training on intermuscular fat (IMF). This study examines changes in IMF in response to strength training in carriers of the adrenergic receptor (ADR) beta2Glu27 polymorphism versus noncarriers and between carriers of ADRalpha2b Glu(9) polymorphism versus noncarriers. METHODS: Midthigh IMF and muscle area were measured by computed tomography (CT) before and after 10 weeks of single-leg strength training in healthy, sedentary middle-aged and older (50-83 years) men (n = 46) and women (n = 52) in both their trained and untrained (control) legs. RESULTS: The strength training program resulted in a substantial increase in one-repetition maximum strength (p <.001) and muscle area (p <.001), but no significant changes in IMF in the whole group. However, IMF was significantly reduced with strength training in participants carrying ADRbeta2 Glu27 (-2. 3 +/- 1.0 cm(2), p =.028), but no significant change was observed with ADRbeta2 Glu27 noncarriers. The decrease in IMF in ADRalpha2b Glu(9) carriers (-1.9 +/- 1.0 cm(2), p =.066) was significantly different (-2.9 +/- 1.5 cm(2), p =.043) from a nonsignificant increase in ADRalpha2b Glu(9) noncarriers. ADRbeta2 Glu27 carriers who also carried ADRalpha2b Glu(9) significantly lost IMF with strength training (-3.8 +/- 1.5 cm(2), p =.018). CONCLUSION: ADR genotype influences IMF response to strength training.


Subject(s)
Adipose Tissue/anatomy & histology , Body Composition/physiology , Muscle Strength/physiology , Muscle, Skeletal/anatomy & histology , Receptors, Adrenergic, alpha-2/genetics , Receptors, Adrenergic, beta-2/genetics , Thigh/anatomy & histology , Black or African American/genetics , Aged , Aged, 80 and over , Body Mass Index , Exercise/physiology , Female , Follow-Up Studies , Genotype , Glutamic Acid/genetics , Glutamine/genetics , Humans , Male , Middle Aged , Polymorphism, Genetic/genetics , Tomography, X-Ray Computed , Weight Lifting/physiology , White People/genetics
12.
Invest Ophthalmol Vis Sci ; 47(12): 5234-42, 2006 Dec.
Article in English | MEDLINE | ID: mdl-17122108

ABSTRACT

PURPOSE: To investigate the effect of lutein supplementation at doses of 2.5, 5.0, and 10 mg/d for 6 months on distribution of these carotenoids and their metabolites in the serum of elderly human subjects, with and without age-related macular degeneration. To determine whether supplementation with lutein can interact with the serum levels of other dietary carotenoids, retinol, and alpha-tocopherol. METHODS: Forty-five subjects received daily supplements of lutein (containing 5% zeaxanthin) for 6 months and were followed up for another 6 months after supplementation. Blood was collected at various intervals and lutein, zeaxanthin, and their metabolites in the sera were quantified by normal-phase high-performance liquid chromatography (HPLC)-UV/visible detection. Other dietary carotenoids, retinol, and alpha-tocopherol were identified and quantified on a C18 reversed phase HPLC column. RESULTS: After 6 months of supplementation with 10 mg of lutein, the increases in the mean serum levels from baseline were: 210 to 1000 nM/L (P < 0.0001) for lutein and 56 to 95 nM/L (P < 0.0001) for zeaxanthin. Similarly, the mean concentrations (nM/L) of carotenoid metabolites increased from 49 to 98 (P < 0.0001) for 3-hydroxy-beta,epsilon-caroten-3'-one (3'-oxolutein); 31 to 80 (P < 0.0001) for 3'-hydroxy-epsilon,epsilon-caroten-3-one; and 19 to 25 (P < 0.0001) for epsilon,epsilon-carotene-3,3'-dione. The serum levels of these carotenoids gradually decline within 6 months after supplementation. CONCLUSIONS: The increase in the serum levels of lutein/zeaxanthin correlates with increases in the serum levels of their metabolites that have previously been identified in the ocular tissues. Elderly human subjects with and without AMD can safely take supplements of lutein up to 10 mg/d for 6 months with no apparent toxicity or side effects.


Subject(s)
Carotenoids/blood , Lutein/administration & dosage , Macular Degeneration/blood , Vitamin A/blood , Xanthophylls/administration & dosage , alpha-Tocopherol/blood , Aged , Aged, 80 and over , Chromatography, High Pressure Liquid , Diet , Dietary Supplements , Double-Blind Method , Drug Therapy, Combination , Female , Humans , Lutein/blood , Male , Middle Aged , Xanthophylls/blood , Zeaxanthins
13.
Ecology ; 87(10): 2591-602, 2006 Oct.
Article in English | MEDLINE | ID: mdl-17089667

ABSTRACT

Low Ca/Mg ratios (a defining component of serpentine soils) and low water environmental conditions often co-occur in nature and are thought to exert strong selection pressures on natural populations. However, few studies test the individual and combined effects of these environmental factors. We investigated the effects of low Ca/Mg ratio and low water availability on plant leaf, stem, stolon, and floral traits of Mimulus guttatus, a bodenvag species, i.e., a species that occurs in serpentine and non-serpentine areas. We quantified genetic variation and genetic variation for plasticity for these leaf, stem, stolon, and floral traits at three hierarchical levels: field-habitat type, population, and family, and we evaluated the relative importance of local adaptation and plasticity. We chose two populations and 10 families per population from four distinct field "habitat types" in northern California: high Ca/Mg ratio (non-serpentine) and season-long water availability, high Ca/Mg ratio and seasonally drying, low Ca/Mg ratio (serpentine) and season-long water availability, and low Ca/Mg ratio and seasonally drying. Seedlings were planted into greenhouse treatments that mimicked the four field conditions. We only detected genetic variation for stem diameter and length of longest leaf at the field-habitat level, but we detected genetic variation at the family level for nearly all traits. Soil chemistry and water availability had strong phenotypic effects, alone and in combination. Our hypothesis of an association between responses to low water levels and low Ca/Mg ratio was upheld for length of longest leaf, stem diameter, corolla width, and total number of reproductive units, whereas for other traits, responses to Ca/Mg ratio and low water were clearly independent. Our results suggest that traits may evolve independently from Ca/Mg ratios and water availability and that our focal traits were not simple alternative measures of vigor. We found genetic variation for plasticity both at the field-habitat type and family levels for half of the traits studied. Phenotypic plasticity and genetic variation for plasticity appear to be more important than local adaptation in the success of these M. guttatus populations found across a heterogeneous landscape in northern California. Phenotypic plasticity is an important mechanism maintaining the broad ecological breadth of native populations of M. guttatus.


Subject(s)
Calcium/physiology , Magnesium/physiology , Mimulus/physiology , Water/physiology , Adaptation, Physiological , Genetic Variation , Inheritance Patterns , Mimulus/genetics , Phenotype , Selection, Genetic , Soil/analysis
14.
Clin Cancer Res ; 12(2): 392-7, 2006 Jan 15.
Article in English | MEDLINE | ID: mdl-16428477

ABSTRACT

PURPOSE: The transforming growth factor-beta (TGF-beta) signaling pathway has been frequently implicated in breast cancer. An intronic variant (Int7G24A) of TGF-beta receptor type I (TGFBR1) is associated with kidney and bladder cancers in our recent study. We hypothesize that this germline variant may be involved in development and progression of breast cancer. EXPERIMENTAL DESIGN: Case-control studies were designed from archived paraffin-embedded tissue specimens from the same geographic area with a homogenous ethnic population. We analyzed 223 patients (25 with preinvasive tumors and 198 with invasive and metastatic breast cancers) and 153 noncancer controls. The Int7G24A was identified by PCR-RFLP. Another germline deletion (TGFBR1*6A) and somatic mutations in the TGFBR1 were also analyzed by PCR and single-strand conformational polymorphism. RESULTS: The Int7G24A allele was evident in 32% of patients with preinvasive neoplasms and 48% of patients with invasive breast cancers compared with 26% controls (P = 0.00008). In addition, 11 (5.6%) homozygous Int7G24A carriers were found in patients with invasive breast cancers, whereas only 3 (2%) homozygous carriers were found in the control group. The TGFBR1*6A allele was not significantly associated with breast cancer patients and only one somatic mutation was found in 71 breast cancers. CONCLUSION: These data suggest that the germline Int7G24A variant may represent a risk factor for invasive breast cancer and a marker for breast cancer progression. A separate study with a larger sample size is warranted to validate the association of the Int7G24A with human breast cancer.


Subject(s)
Activin Receptors, Type I/genetics , Breast Neoplasms/genetics , Genetic Variation , Introns/genetics , Neoplasm Invasiveness/genetics , Receptors, Transforming Growth Factor beta/genetics , Adult , Aged , Aged, 80 and over , Breast Neoplasms/metabolism , Breast Neoplasms/pathology , Carcinoma, Ductal, Breast/genetics , Carcinoma, Ductal, Breast/metabolism , Carcinoma, Ductal, Breast/secondary , Carcinoma, Lobular/genetics , Carcinoma, Lobular/metabolism , Carcinoma, Lobular/secondary , Case-Control Studies , Disease Progression , Female , Germ-Line Mutation/genetics , Humans , Male , Middle Aged , Neoplasm Invasiveness/pathology , Polymerase Chain Reaction , Polymorphism, Restriction Fragment Length , Polymorphism, Single-Stranded Conformational , Protein Serine-Threonine Kinases , Receptor, Transforming Growth Factor-beta Type I , Risk Factors , Sequence Deletion/genetics
15.
Am J Physiol Heart Circ Physiol ; 290(5): H1848-55, 2006 May.
Article in English | MEDLINE | ID: mdl-16339827

ABSTRACT

In its role as an endothelial cell proliferation and migration factor, vascular endothelial growth factor (VEGF) can affect peripheral circulation and therefore impact maximal oxygen consumption (Vo2 max). Because of the role of VEGF, and because variation in the VEGF gene has the ability to alter VEGF gene expression and VEGF protein level, we hypothesized that VEGF gene polymorphisms are related to VEGF gene expression in human myoblasts and Vo2 max before and after aerobic exercise training. We analyzed the effects of the VEGF -2578/-1154/-634 promoter region haplotype on VEGF gene expression by using a luciferase reporter assay in cultured human myoblasts and found that the AAG and CGC haplotypes resulted in significantly higher hypoxia-stimulated VEGF gene expression than the AGG and CGG haplotypes. Consistent with these results, we found that individuals with at least one copy of the AAG or CGC haplotype had higher Vo2 max before and after aerobic exercise training than did subjects with only the AGG and/or CGG haplotype. In conclusion, we found that VEGF -2578/-1154/-634 haplotype impacts VEGF gene expression in human myoblasts and is associated with Vo2 max. These results have potential implications for aerobic exercise training and may prove relevant in the study of pathological conditions that can be affected by angiogenesis, such as coronary artery disease and peripheral artery disease.


Subject(s)
Exercise/physiology , Gene Expression Regulation/physiology , Muscle Fibers, Skeletal/physiology , Oxygen Consumption/genetics , Oxygen/metabolism , Physical Endurance/genetics , Vascular Endothelial Growth Factor A/physiology , Aged , DNA/genetics , DNA Mutational Analysis , Female , Humans , Male , Middle Aged , Polymorphism, Single Nucleotide/genetics , Promoter Regions, Genetic/genetics , Sequence Analysis, DNA , Vascular Endothelial Growth Factor A/blood , Vascular Endothelial Growth Factor A/genetics
16.
J Appl Physiol (1985) ; 98(6): 2147-54, 2005 Jun.
Article in English | MEDLINE | ID: mdl-15894537

ABSTRACT

Strength training (ST) is considered an intervention of choice for the prevention and treatment of sarcopenia. Reports in the literature have suggested that the insulin-like growth factor I protein (IGF-I) plays a major role in ST-induced skeletal muscle hypertrophy and strength improvements. A microsatellite repeat in the promoter region of the IGF1 gene has been associated with IGF-I blood levels and phenotypes related to IGF-I in adult men and women. To examine the influence of this polymorphism on muscle hypertrophic and strength responses to ST, we studied 67 Caucasian men and women before and after a 10-wk single-leg knee-extension ST program. One repetition maximum strength, muscle volume via computed tomography, and muscle quality were assessed at baseline and after 10 wk of training. The IGF1 repeat promoter polymorphism and three single-nucleotide polymorphisms were genotyped. For the promoter polymorphism, subjects were grouped as homozygous for the 192 allele, heterozygous, or noncarriers of the 192 allele. After 10 wk of training, 1-repetition maximum, muscle volume, and muscle quality increased significantly for all groups combined (P < 0.001). However, carriers of the 192 allele gained significantly more strength with ST than noncarriers of the 192 allele (P = 0.02). There was also a nonsignificant trend for a greater increase in muscle volume in 192 carriers than noncarriers (P = 0.08). No significant associations were observed for the other polymorphisms studied. Thus these data suggest that the IGF1 promoter polymorphism may influence the strength response to ST. Larger sample sizes should be used in future studies to verify these results.


Subject(s)
Aging/physiology , Exercise/physiology , Insulin-Like Growth Factor I/genetics , Muscle Contraction/physiology , Muscle, Skeletal/anatomy & histology , Muscle, Skeletal/physiology , Physical Endurance/physiology , Physical Fitness/physiology , Aged , Aged, 80 and over , Cohort Studies , DNA Mutational Analysis , Female , Genotype , Humans , Male , Middle Aged , Organ Size/physiology , Polymorphism, Single Nucleotide/genetics
17.
Int J Cancer ; 112(3): 420-5, 2004 Nov 10.
Article in English | MEDLINE | ID: mdl-15382067

ABSTRACT

TGF-beta signaling is frequently perturbed in many human cancers, including renal cell carcinomas (RCCs) and transitional cell carcinomas (TCCs) of the bladder. Genetic alterations of the TGF-beta type 1 receptor (TGFBR1) may contribute to these perturbations. We therefore examined variations in the TGFBR1 gene by PCR, SSCP and RFLP in carcinomas of the urinary system and in tissues from noncancer, age-matched controls. A G-->A variant 24 bp downstream of the exon/intron 7 boundary of the TGFBR1 gene (Int7G24A) was evident in patients with RCC (46.5%, n = 86) and bladder and upper urinary tract TCC (49.2%, n = 65) significantly more frequently than in age-matched controls (28.3%, n = 113, p < 0.002 by chi2 test). Moreover, 8 homozygous variant carriers were found in the cancer groups, whereas not a single homozygous variant carrier was found in the control group. The Int7G24A allele (both heterozygous G/A and homozygous A/A carriers) was associated with increased RCC incidence (OR = 2.20, 95% CI 1.22-3.96) and TCC incidence (OR = 2.45, 95% CI 1.89-3.16). One somatic mutation of serine to phenylalanine at codon 57 of the TGFBR1 gene was confirmed in an upper urinary tract TCC. In conclusion, the Int7G24A variant in the TGFBR1 gene is significantly more frequent in patients with RCC and TCC than normal age-matched controls, suggesting that it may represent a risk factor for the development of kidney and bladder carcinomas.


Subject(s)
Activin Receptors, Type I/genetics , Carcinoma, Renal Cell/genetics , Carcinoma, Transitional Cell/genetics , Genetic Variation , Introns/genetics , Kidney Neoplasms/genetics , Receptors, Transforming Growth Factor beta/genetics , Urinary Bladder Neoplasms/genetics , Adolescent , Adult , Aged , Aged, 80 and over , Case-Control Studies , Female , Homozygote , Humans , Kidney , Male , Middle Aged , Mutation/genetics , Polymerase Chain Reaction , Polymorphism, Restriction Fragment Length , Polymorphism, Single-Stranded Conformational , Protein Serine-Threonine Kinases , Receptor, Transforming Growth Factor-beta Type I , Urinary Bladder
18.
Clin Cancer Res ; 10(10): 3448-56, 2004 May 15.
Article in English | MEDLINE | ID: mdl-15161701

ABSTRACT

PURPOSE: The p21-activated kinase-1 (Pak-1) promotes cell motility and invasiveness. Pak-1 is activated by the Rac, Rho, and Cdc42 small GTPases in response to a variety of stimuli including ras and phosphatidylinositol 3'-kinase/AKT pathway activation. Because Pak-1 plays a central role in regulating cell motility and invasiveness, we sought to determine whether Pak-1 may be involved in the malignant progression of colorectal carcinoma. EXPERIMENTAL DESIGN: Pak-1 expression was examined by immunohistochemistry in archived tissues from normal human colons, tubular and tubulovillous adenomas, invasive adenocarcinomas (stages I-III/IV), and lymph node metastases (184 total specimens from 38 patients). Specific cytoplasmic immunostaining was evaluated for overall intensity and uniformity to derive a combined histoscore (stain intensity x percentage of epithelium stained). RESULTS: Pak-1 expression was increased significantly with colorectal cancer progression from normal tissue to lymph node metastases (P < 0.0001). Furthermore, Pak-1 expression was increased significantly in adenomas, invasive carcinomas, and lymph node metastases compared with normal colon (P < 0.0001). Strikingly, Pak-1 expression was significantly higher in lymph node metastases than in invasive cancers, adenomas, or normal colon (P < 0.0001). Moreover, in patients with multiple lesions representing different stages of disease, Pak-1 expression was increased specifically in the most advanced lesions. CONCLUSIONS: This study demonstrates that Pak-1 expression is increased significantly with malignant progression of human colorectal carcinoma. These data, along with numerous functional studies demonstrating a central role for Pak-1 activity in tumor invasiveness and motility, implicate Pak-1 as an exciting target for therapy of colorectal carcinoma.


Subject(s)
Colorectal Neoplasms/pathology , Protein Serine-Threonine Kinases/biosynthesis , Adenoma/metabolism , Carcinoma/metabolism , Colon/pathology , Colonic Neoplasms/pathology , Colorectal Neoplasms/metabolism , Cytoplasm/metabolism , Disease Progression , GTP Phosphohydrolases/metabolism , Humans , Immunohistochemistry , Lymphatic Metastasis , Neoplasm Metastasis , Phosphatidylinositol 3-Kinases/metabolism , Protein Serine-Threonine Kinases/metabolism , Treatment Outcome , cdc42 GTP-Binding Protein/metabolism , p21-Activated Kinases , ras Proteins/metabolism
19.
Obes Res ; 12(5): 807-15, 2004 May.
Article in English | MEDLINE | ID: mdl-15166301

ABSTRACT

OBJECTIVE: To examine the contribution of adrenergic receptor (ADR) gene polymorphisms and their gene-gene interactions to the variability of exercise training-induced body fat response. RESEARCH METHODS AND PROCEDURES: This was an intervention study that used a volunteer sample of 70 healthy, sedentary men (n = 29) and postmenopausal women (n = 41) 50 to 75 years of age, with a BMI < or = 37 kg/m2, from the Washington, DC, metropolitan area. Participants completed 6 weeks of dietary stabilization (American Heart Association diet) before 24 weeks of supervised aerobic exercise training. Diet was maintained throughout the intervention. Change in percent total body fat, percent trunk fat, and fat mass by DXA in ADR genotype groups (Glu12/Glu9 alpha2b-ADR, Trp64Arg beta3-ADR, and Gln27Glu beta2-ADR) at baseline and after 24 weeks of aerobic exercise training was measured. RESULTS: In multivariate analysis (covariates: age, gender, and baseline value of phenotype), best fit models for percent total body and trunk fat response to exercise training retained main effects of all three ADR gene loci and the effects of each gene-gene interaction (p = 0.009 and 0.003, respectively). Similarly, there was a trend for the fat mass response model (p = 0.03). The combined genetic factors explained 17.5% of the overall model variability for percent total body fat, 22% for percent trunk fat, and 10% for fat mass. DISCUSSION: The body fat response to exercise training in older adults is associated with the combined effects of the Glu12/Glu9 alpha2b-, Trp64Arg beta3-, and Gln27Glu beta2-ADR gene variants and their gene-gene interactions.


Subject(s)
Adipose Tissue , Body Composition , Exercise , Genotype , Receptors, Adrenergic/genetics , Aged , Alleles , Analysis of Variance , Body Composition/genetics , Diet , Female , Gene Frequency , Humans , Male , Middle Aged , Polymorphism, Genetic , Receptors, Adrenergic, alpha-2/genetics , Receptors, Adrenergic, beta-2/genetics , Receptors, Adrenergic, beta-3/genetics
20.
Med Sci Sports Exerc ; 36(1): 118-29, 2004 Jan.
Article in English | MEDLINE | ID: mdl-14707777

ABSTRACT

PURPOSE: Electroencephalographic (EEG) recordings were examined at the temporal (T3, T4) regions of the cerebral cortex in novice pistol shooters (N = 11) over a training period of 12-14 wk to determine changes in activation. Mean alpha power and its rate of change were hypothesized to increase in the left temporal region during aiming from early to late season as participants improved their accuracy and reduced cognitive effort. METHODS: Event-related alpha II power (ERAP; 11-13 Hz) was examined over a 5-s period preceding the trigger pull during shooting (SH) and two control conditions (resting baseline, BL; and postural simulation, PS) at early (time 1), middle (time 2), and late (time 3) practice. RESULTS: Mean levels of ERAP increased at T3 from the beginning to the end of the training period during both SH and PS, but not BL, whereas no such change in mean level of ERAP was noted at T4 during any of the three conditions. The practice-related cortical adaptation during SH covaried with an increase in shooting percentage over the season. A higher rate of increase in ERAP during the 5-s aiming period of SH relative to that at PS and BL was also observed throughout training at both T3 and T4. Exploratory analysis of global power (sites F3, Fz, F4, C3, Cz, C4, P3, Pz, and P4) revealed that ERAP increased during SH from time 1 to time 3 at all sites except Fz and Pz, whereas only one site (C4) revealed an increase during BL. CONCLUSIONS: The reduction in cortical activity is likely due to sensorimotor integration and less cognitive effort due to automaticity.


Subject(s)
Adaptation, Physiological , Electroencephalography , Firearms , Psychomotor Performance/physiology , Temporal Lobe/physiology , Visual Perception/physiology , Adolescent , Adult , Brain Mapping , Cognition/physiology , Female , Humans , Male , Time Factors
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