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1.
Nanotechnology ; 32(33)2021 May 24.
Article in English | MEDLINE | ID: mdl-33951616

ABSTRACT

Nanostructured n-type metal oxides/p-type boron-doped diamond heterojunctions have demonstrated a typical rectification feature and/or negative differential resistance (NDR) potentially applied in wide fields. Recently, the fabrication and electronic transport behavior of n-WO3nanorods/p-diamond heterojunction at high temperatures were studied by Wanget al(2017Appl. Phys. Lett.110052106), which opened the door for optoelectronic applications that can operate at high-temperatures, high-power, and in various harsh environments. In this perspective, an overview was presented on the future directions, challenges and opportunities for the optoelectronic applications based on the n-WO3nanostructures/p-diamond heterojunction. We focus, in particular, on the prospects for its high temperature NDR, UV photodetector, field emission emitters, photocatalyst and optical information storage for a wide range of new optoelectronic applications.

2.
Molecules ; 26(1)2020 Dec 25.
Article in English | MEDLINE | ID: mdl-33375703

ABSTRACT

This review is mainly focused on the optoelectronic properties of diamond-based one-dimensional-metal-oxide heterojunction. First, we briefly introduce the research progress on one-dimensional (1D)-metal-oxide heterojunctions and the features of the p-type boron-doped diamond (BDD) film; then, we discuss the use of three oxide types (ZnO, TiO2 and WO3) in diamond-based-1D-metal-oxide heterojunctions, including fabrication, epitaxial growth, photocatalytic properties, electrical transport behavior and negative differential resistance behavior, especially at higher temperatures. Finally, we discuss the challenges and future trends in this research area. The discussed results of about 10 years' research on high-performance diamond-based heterojunctions will contribute to the further development of photoelectric nano-devices for high-temperature and high-power applications.


Subject(s)
Boron/chemistry , Diamond/chemistry , Metals/chemistry , Oxides/chemistry , Microscopy, Electron, Scanning , Organic Chemicals/chemistry
3.
PLoS Pathog ; 16(10): e1008957, 2020 10.
Article in English | MEDLINE | ID: mdl-33104753

ABSTRACT

Infection with the influenza virus triggers an innate immune response that initiates the adaptive response to halt viral replication and spread. However, the metabolic response fueling the molecular mechanisms underlying changes in innate immune cell homeostasis remain undefined. Although influenza increases parasitized cell metabolism, it does not productively replicate in dendritic cells. To dissect these mechanisms, we compared the metabolism of dendritic cells to that of those infected with active and inactive influenza A virus and those treated with toll-like receptor agonists. Using quantitative mass spectrometry, pulse chase substrate utilization assays and metabolic flux measurements, we found global metabolic changes in dendritic cells 17 hours post infection, including significant changes in carbon commitment via glycolysis and glutaminolysis, as well as mitochondrial respiration. Influenza infection of dendritic cells led to a metabolic phenotype distinct from that induced by TLR agonists, with significant resilience in terms of metabolic plasticity. We identified c-Myc as one transcription factor modulating this response. Restriction of c-Myc activity or mitochondrial substrates significantly changed the immune functions of dendritic cells, such as reducing motility and T cell activation. Transcriptome analysis of inflammatory dendritic cells isolated following influenza infection showed similar metabolic reprogramming occurs in vivo. Thus, early in the infection process, dendritic cells respond with global metabolic restructuring, that is present in inflammatory lung dendritic cells after infection, and this is important for effector function. These findings suggest metabolic switching in dendritic cells plays a vital role in initiating the immune response to influenza infection.


Subject(s)
Dendritic Cells/immunology , Dendritic Cells/metabolism , Immunity, Innate/immunology , Influenza A virus/immunology , Lymphocyte Activation/immunology , Orthomyxoviridae Infections/immunology , Virus Replication , Animals , CD8-Positive T-Lymphocytes/immunology , CD8-Positive T-Lymphocytes/metabolism , CD8-Positive T-Lymphocytes/virology , Dendritic Cells/virology , Female , Glycolysis , Male , Mice , Mice, Inbred C57BL , Orthomyxoviridae Infections/metabolism , Orthomyxoviridae Infections/virology , Proteome/analysis , Proteome/metabolism , Toll-Like Receptors/metabolism
4.
Spectrochim Acta A Mol Biomol Spectrosc ; 236: 118352, 2020 Aug 05.
Article in English | MEDLINE | ID: mdl-32320915

ABSTRACT

Blue, yellow and red emissions from the extract of a single plant source (pomegranate), under NUV light excitation have been reported. The blue emission (450 nm) was attributed to baicalin and protein, whereas the yellow (550 nm) and red (665 nm) emissions were due to two kinds of anthocyanin components (A1 and A2, respectively). Both the green-to-white and yellow-to-white photoluminescences were tuned by variation of excitation wavelengths (350-400 nm). This change in photoluminescence was due to the occurrence of Forster resonance energy transfer from baicalin to A1. White light emission with good CIE color coordinates (0.34, 0.33) was obtained from the pomegranate pulp extract solution (12% w/v) at excitation of 350 nm. The results demonstrated that white light emission could be achieved from a single plant source, which would provide a new method for the design and fabrication of WLE with simple, green, and low-cost materials.


Subject(s)
Plant Extracts/chemistry , Pomegranate/chemistry , Anthocyanins/analysis , Anthocyanins/chemistry , Color , Flavonoids/analysis , Flavonoids/chemistry , Fluorescence Resonance Energy Transfer , Light , Luminescence , Plant Proteins/analysis , Plant Proteins/chemistry , Polyphenols/analysis , Spectrophotometry, Ultraviolet
5.
Spectrochim Acta A Mol Biomol Spectrosc ; 231: 118096, 2020 Apr 15.
Article in English | MEDLINE | ID: mdl-32006915

ABSTRACT

In this study, a simple low-temperature route is presented for the synthesis of Mg and Ce co-doped ZnO quantum dots (QDs). X-ray diffraction, transmission electron microscopy, electron paramagnetic resonance, X-ray photoelectron spectroscopy, UV-vis absorption spectra, and fluorescence measurements were used to characterize the synthesized QDs. The results indicate that the oxygen vacancy concentration could be tuned via Mg and Ce ions doping, which leads to the regulation of luminescence. The visible emission was directly associated with oxygen vacancies, and a blue shift of the visible emission with increasing Ce doping concentration was due to the quantum confinement effect. Finally, we explored the application of Mg and Ce co-doped ZnO QDs by fabricating a white LED device. Notably, the white LED device presents good luminescence properties under a voltage of 3 V and a driven current of 200 mA. The Commission International de l'Eclairage chromaticity, the correlated color temperature, and the color rendering index were determined to be (x = 0.32, y = 0.30), 5733 K, and 81, respectively, which make them potential candidates as single-phased QDs for white light-emitting diodes.

6.
Sci Total Environ ; 697: 133979, 2019 Dec 20.
Article in English | MEDLINE | ID: mdl-31479906

ABSTRACT

Pedicularis kansuensis is a poisonous grass and a semi-parasitic plant that has spread rapidly in alpine grasslands in recent years and caused great harm to animal husbandry and the ecological environment. However, little is known about the habitat of P. kansuensis and the key environmental factors that influence its expansion. We assessed the potential impact of climate change on the distribution of P. kansuensis in China under representative concentration pathway (RCP) 2.6 and RCP 8.5 using maximum entropy (MaxEnt) and MigClim for the years 2050 and 2070 and examined key environmental factors affecting P. kansuensis distribution. In total, 118 occurrence points and fourteen selected variables were used for the modeling. The models developed for P. kansuensis showed excellent performance (AUC > 0.9 and TSS > 0.90). The results were as follows. 1) The occupied habitats for P. kansuensis in the four climate scenarios were generally offset in the northward direction. 2) The most important environmental variables influencing the spread of P. kansuensis were altitude, annual precipitation, annual temperature range, precipitation in the warmest quarter and ultraviolet-B radiation seasonality (UVB-2). 3) Under RCP 2.6, the occupied habitat would be increased 0.04% by 2050 and would be increased to 0.51% by 2070. Under RCP 8.5, the average occupied habitat was predicted to increase 0.07% by 2050 and increase to 0.53% by 2070. The increase was relatively higher in the occupied habitats located in the southwestern regions (Sichuan, Xizang and Yunnan) than those in the northwestern regions (Gansu and Xinjiang).


Subject(s)
Climate Change , Ecosystem , Pedicularis/physiology , Altitude , Animals , China , Entropy , Poaceae , Temperature
7.
Immunity ; 49(3): 531-544.e6, 2018 09 18.
Article in English | MEDLINE | ID: mdl-30170813

ABSTRACT

Compared to adults, infants suffer higher rates of hospitalization, severe clinical complications, and mortality due to influenza infection. We found that γδ T cells protected neonatal mice against mortality during influenza infection. γδ T cell deficiency did not alter viral clearance or interferon-γ production. Instead, neonatal influenza infection induced the accumulation of interleukin-17A (IL-17A)-producing γδ T cells, which was associated with IL-33 production by lung epithelial cells. Neonates lacking IL-17A-expressing γδ T cells or Il33 had higher mortality upon influenza infection. γδ T cells and IL-33 promoted lung infiltration of group 2 innate lymphoid cells and regulatory T cells, resulting in increased amphiregulin secretion and tissue repair. In influenza-infected children, IL-17A, IL-33, and amphiregulin expression were correlated, and increased IL-17A levels in nasal aspirates were associated with better clinical outcomes. Our results indicate that γδ T cells are required in influenza-infected neonates to initiate protective immunity and mediate lung homeostasis.


Subject(s)
Influenza A virus/physiology , Influenza, Human/immunology , Interleukin-17/metabolism , Lung/immunology , Orthomyxoviridae Infections/immunology , T-Lymphocytes/immunology , Th2 Cells/immunology , Adult , Amphiregulin/metabolism , Animals , Cells, Cultured , Child , Humans , Immunity , Infant, Newborn , Interleukin-33/metabolism , Mice , Prognosis , Receptors, Antigen, T-Cell, gamma-delta/metabolism
8.
Molecules ; 23(7)2018 06 21.
Article in English | MEDLINE | ID: mdl-29933591

ABSTRACT

Cassia fistula L. which is known as "Golden Shower", is used as an ornamental plant due to its flowers, and fruit parts of this plant have a high medicinal value. There are few reports providing a comprehensive overview of the chemical composition of its fruit or explaining the differences between samples from different sources because of the complexity of its chemical components. The purpose of the present study was to establish a fingerprint evaluation system based on Similarity Analysis (SA), Hierarchical Cluster Analysis (HCA) and Principal Component Analysis (PCA) for the composition identification and quality control of this herb. Twelve samples from Xinjiang and Sichuan provinces in China and India were analyzed by HPLC, and there were fifteen common peaks in the twelve batches. Molecular weight and formula information can be derived from thirty-one peaks by UHPLC/LTQ-Orbitrap MSn, molecular structure information of twenty components was obtained, of which ten compounds were identified by comparison with standard materials. Samples of twelve batches were divided according to their similarity into four groups, which were basically consistent with three different C.fistula fruit-producing areas. Five compounds were finally considered to be chemical markers to determine the quality of this herb. A fingerprints method combined with chemometrics was established to differentiate the origin of the fruit of C. fistula which has the advantages of effectivity and convenience, laying the foundation for the quality evaluation of this herb from different sources.


Subject(s)
Cassia/chemistry , Drugs, Chinese Herbal/chemistry , Fruit/chemistry , Metabolome , China , Chromatography, High Pressure Liquid , Cluster Analysis , Flavanones/chemistry , Flavanones/isolation & purification , Kaempferols/chemistry , Kaempferols/isolation & purification , Molecular Structure , Principal Component Analysis , Senna Extract/chemistry , Senna Extract/isolation & purification
9.
Cell Rep ; 19(8): 1640-1653, 2017 05 23.
Article in English | MEDLINE | ID: mdl-28538182

ABSTRACT

Influenza is a worldwide health and financial burden posing a significant risk to the immune-compromised, obese, diabetic, elderly, and pediatric populations. We identified increases in glucose metabolism in the lungs of pediatric patients infected with respiratory pathogens. Using quantitative mass spectrometry, we found metabolic changes occurring after influenza infection in primary human respiratory cells and validated infection-associated increases in c-Myc, glycolysis, and glutaminolysis. We confirmed these findings with a metabolic drug screen that identified the PI3K/mTOR inhibitor BEZ235 as a regulator of infectious virus production. BEZ235 treatment ablated the transient induction of c-Myc, restored PI3K/mTOR pathway homeostasis measured by 4E-BP1 and p85 phosphorylation, and reversed infection-induced changes in metabolism. Importantly, BEZ235 reduced infectious progeny but had no effect on the early stages of viral replication. BEZ235 significantly increased survival in mice, while reducing viral titer. We show metabolic reprogramming of host cells by influenza virus exposes targets for therapeutic intervention.


Subject(s)
Influenza, Human/metabolism , Influenza, Human/therapy , Animals , Cell Survival/drug effects , Drug Evaluation, Preclinical , Female , Glucose/metabolism , Glutamine/metabolism , Humans , Imidazoles/pharmacology , Imidazoles/therapeutic use , Influenza, Human/virology , Lung/drug effects , Lung/metabolism , Lung/virology , Metabolic Flux Analysis , Mice, Inbred C57BL , Orthomyxoviridae Infections/drug therapy , Orthomyxoviridae Infections/metabolism , Orthomyxoviridae Infections/virology , Proteome/metabolism , Quinolines/pharmacology , Quinolines/therapeutic use , Toll-Like Receptors/metabolism
10.
Sci Rep ; 7: 44727, 2017 03 17.
Article in English | MEDLINE | ID: mdl-28303960

ABSTRACT

Because of the pathogenicity and low incidence of avian influenza virus infections in humans, the immune correlates of protection for avian influenza vaccines cannot be determined from clinical studies. Here, we used the ferret model to address this for an avian influenza H5N1 vaccine. Using oil-in-water adjuvants, we generated groups of ferrets with undetectable (geometric mean titer [GMT] < 10), low (GMT = 28.3), or high (GMT > 761.1) hemagglutination-inhibition (HAI) titers to the A/Viet Nam/1203/2004 (H5N1) virus. Ferrets were then challenged with the wild-type virus and disease severity and immunologic parameters were studied. The severity of infection and symptom profile were inversely associated with pre-challenge HAI titers in a dose-dependent manner. A vaccinated ferret with no detectable HAI-antibodies but high flu-specific IgG-antibody titers mounted rapid functional antibodies after infection and experienced milder disease compared to other ferrets in the group. Compared to naïve ferrets, all vaccinated ferrets showed improved cellular immunity in the lungs and peripheral blood. High number of IFNγ+ CD8- T cells in the airways was associated with early viral clearance. Thus, while neutralizing antibodies are the best correlate of protection, non-neutralizing antibodies can also be protective. This should be taken into consideration in future avian influenza vaccine trials.


Subject(s)
Adjuvants, Immunologic/pharmacology , Birds/virology , Ferrets/immunology , Influenza A Virus, H5N1 Subtype/immunology , Influenza Vaccines/immunology , Oils/chemistry , Orthomyxoviridae Infections/virology , Water/chemistry , Animals , Antibodies, Viral/blood , Antibody Formation/immunology , Bronchoalveolar Lavage Fluid , CD8-Positive T-Lymphocytes/immunology , Disease Models, Animal , Ferrets/virology , Hemagglutination Inhibition Tests , Immunity, Cellular , Immunoglobulin G/blood , Orthomyxoviridae Infections/blood , Orthomyxoviridae Infections/immunology , Orthomyxoviridae Infections/prevention & control , Severity of Illness Index , Vaccination
11.
J Immunol ; 198(8): 3214-3226, 2017 04 15.
Article in English | MEDLINE | ID: mdl-28283567

ABSTRACT

Eosinophils are multifunctional cells of the innate immune system linked to allergic inflammation. Asthmatics were more likely to be hospitalized but less likely to suffer severe morbidity and mortality during the 2009 influenza pandemic. These epidemiologic findings were recapitulated in a mouse model of fungal asthma wherein infection during heightened allergic inflammation was protective against influenza A virus (IAV) infection and disease. Our goal was to delineate a mechanism(s) by which allergic asthma may alleviate influenza disease outcome, focused on the hypothesis that pulmonary eosinophilia linked with allergic respiratory disease is able to promote antiviral host defenses against the influenza virus. The transfer of eosinophils from the lungs of allergen-sensitized and challenged mice into influenza virus-infected mice resulted in reduced morbidity and viral burden, improved lung compliance, and increased CD8+ T cell numbers in the airways. In vitro assays with primary or bone marrow-derived eosinophils were used to determine eosinophil responses to the virus using the laboratory strain (A/PR/08/1934) or the pandemic strain (A/CA/04/2009) of IAV. Eosinophils were susceptible to IAV infection and responded by activation, piecemeal degranulation, and upregulation of Ag presentation markers. Virus- or viral peptide-exposed eosinophils induced CD8+ T cell proliferation, activation, and effector functions. Our data suggest that eosinophils promote host cellular immunity to reduce influenza virus replication in lungs, thereby providing a novel mechanism by which hosts with allergic asthma may be protected from influenza morbidity.


Subject(s)
Asthma/immunology , Eosinophils/immunology , Influenza A virus/immunology , Orthomyxoviridae Infections/immunology , Animals , Asthma/complications , CD8-Positive T-Lymphocytes/immunology , Disease Models, Animal , Flow Cytometry , Hypersensitivity/complications , Hypersensitivity/immunology , Lymphocyte Activation/immunology , Mice , Microscopy, Confocal , Microscopy, Electron, Transmission , Orthomyxoviridae Infections/complications , Pulmonary Eosinophilia/immunology
12.
J Virol ; 91(2)2017 Jan 15.
Article in English | MEDLINE | ID: mdl-27847354

ABSTRACT

Neuraminidase (NA) is a sialidase expressed on the surface of influenza A viruses that releases progeny viruses from the surface of infected cells and prevents viruses becoming trapped in mucus. It is a homotetramer, with each monomer consisting of a transmembrane region, a stalk, and a globular head with sialidase activity. We recently characterized two swine viruses of the pandemic H1N1 lineage, A/swine/Virginia/1814-1/2012 (pH1N1low-1) and A/swine/Virginia/1814-2/2012 (pH1N1low-2), with almost undetectable NA enzymatic activity compared to that of the highly homologous A/swine/Pennsylvania/2436/2012 (pH1N1-1) and A/swine/Minnesota/2499/2012 (pH1N1-2) viruses. pH1N1-1 transmitted to aerosol contact ferrets, but pH1N1low-1 did not. The aim of this study was to identify the molecular determinants associated with low NA activity as potential markers of aerosol transmission. We identified the shared unique substitutions M19V, A232V, D248N, and I436V (N1 numbering) in pH1N1low-1 and pH1N1low-2. pH1N1low-1 also had the unique Y66D substitution in the stalk domain, where 66Y was highly conserved in N1 NAs. Restoration of 66Y was critical for the NA activity of pH1N1low-1 NA, although 19M or 248D in conjunction with 66Y was required to recover the level of activity to that of pH1N1 viruses. Studies of NA stability and molecular modeling revealed that 66Y likely stabilized the NA homotetramer. Therefore, 66Y in the stalk domain of N1 NA was critical for the stability of the NA tetramer and, subsequently, for NA enzymatic activity. IMPORTANCE: Neuraminidase (NA) is a sialidase that is one of the major surface glycoproteins of influenza A viruses and the target for the influenza drugs oseltamivir and zanamivir. NA is important as it releases progeny viruses from the surface of infected cells and prevents viruses becoming trapped in mucus. Mutations in the globular head domain that decrease enzymatic activity but confer resistance to NA inhibitors have been characterized; however, the importance of specific mutations in the stalk domain is unknown. We identified 66Y (N1 numbering), a highly conserved amino acid that was critical for the stability of the NA tetramer and, subsequently, for NA enzymatic activity.


Subject(s)
Amino Acids/genetics , Neuraminidase/genetics , Neuraminidase/metabolism , Protein Domains/genetics , Viral Proteins/genetics , Viral Proteins/metabolism , Amino Acid Substitution , Amino Acids/chemistry , Animals , Cell Line , Dogs , Enzyme Activation , Enzyme Stability , Humans , Influenza A Virus, H1N1 Subtype/enzymology , Influenza A Virus, H1N1 Subtype/genetics , Models, Molecular , Mutation , Mutation Rate , Neuraminidase/chemistry , Protein Conformation , Structure-Activity Relationship , Viral Proteins/chemistry , Virus Replication
13.
PLoS Pathog ; 12(8): e1005804, 2016 08.
Article in English | MEDLINE | ID: mdl-27505057

ABSTRACT

The healthy lung maintains a steady state of immune readiness to rapidly respond to injury from invaders. Integrins are important for setting the parameters of this resting state, particularly the epithelial-restricted αVß6 integrin, which is upregulated during injury. Once expressed, αVß6 moderates acute lung injury (ALI) through as yet undefined molecular mechanisms. We show that the upregulation of ß6 during influenza infection is involved in disease pathogenesis. ß6-deficient mice (ß6 KO) have increased survival during influenza infection likely due to the limited viral spread into the alveolar spaces leading to reduced ALI. Although the ß6 KO have morphologically normal lungs, they harbor constitutively activated lung CD11b+ alveolar macrophages (AM) and elevated type I IFN signaling activity, which we traced to the loss of ß6-activated transforming growth factor-ß (TGF-ß). Administration of exogenous TGF-ß to ß6 KO mice leads to reduced numbers of CD11b+ AMs, decreased type I IFN signaling activity and loss of the protective phenotype during influenza infection. Protection extended to other respiratory pathogens such as Sendai virus and bacterial pneumonia. Our studies demonstrate that the loss of one epithelial protein, αVß6 integrin, can alter the lung microenvironment during both homeostasis and respiratory infection leading to reduced lung injury and improved survival.


Subject(s)
Antigens, Neoplasm/immunology , Integrins/immunology , Interferon Type I/biosynthesis , Interferon Type I/immunology , Lung/immunology , Respiratory Tract Infections/immunology , Adoptive Transfer , Animals , Disease Models, Animal , Enzyme-Linked Immunosorbent Assay , Female , Flow Cytometry , Fluorescent Antibody Technique , Immunoblotting , Lung/microbiology , Macrophages, Alveolar/immunology , Male , Mice , Mice, Inbred C57BL , Mice, Knockout , Oligonucleotide Array Sequence Analysis , Real-Time Polymerase Chain Reaction
14.
Front Immunol ; 7: 25, 2016.
Article in English | MEDLINE | ID: mdl-26904022

ABSTRACT

Influenza A virus (IAV) is a significant human pathogen causing annual epidemics and periodic pandemics. CD8(+) cytotoxic T lymphocyte (CTL)-mediated immunity contributes to the clearance of virus-infected cells, and CTL immunity targeting the conserved internal proteins of IAVs is a key protection mechanism when neutralizing antibodies are absent during heterosubtypic IAV infection. However, CTL infiltration into the airways, its cytotoxicity, and the effects of produced proinflammatory cytokines can cause severe lung tissue injury, thereby contributing to immunopathology. Studies have discovered complicated and exquisite stimulatory and inhibitory mechanisms that regulate CTL magnitude and effector activities during IAV infection. Here, we review the state of knowledge on the roles of IAV-specific CTLs in immune protection and immunopathology during IAV infection in animal models, highlighting the key findings of various requirements and constraints regulating the balance of immune protection and pathology involved in CTL immunity. We also discuss the evidence of cross-reactive CTL immunity as a positive correlate of cross-subtype protection during secondary IAV infection in both animal and human studies. We argue that the effects of CTL immunity on protection and immunopathology depend on multiple layers of host and viral factors, including complex host mechanisms to regulate CTL magnitude and effector activity, the pathogenic nature of the IAV, the innate response milieu, and the host historical immune context of influenza infection. Future efforts are needed to further understand these key host and viral factors, especially to differentiate those that constrain optimally effective CTL antiviral immunity from those necessary to restrain CTL-mediated non-specific immunopathology in the various contexts of IAV infection, in order to develop better vaccination and therapeutic strategies for modifying protective CTL immunity.

15.
PLoS Pathog ; 11(2): e1004642, 2015 Feb.
Article in English | MEDLINE | ID: mdl-25668410

ABSTRACT

The recent emergence of a novel H7N9 influenza A virus (IAV) causing severe human infections in China raises concerns about a possible pandemic. The lack of pre-existing neutralizing antibodies in the broader population highlights the potential protective role of IAV-specific CD8(+) cytotoxic T lymphocyte (CTL) memory specific for epitopes conserved between H7N9 and previously encountered IAVs. In the present study, the heterosubtypic immunity generated by prior H9N2 or H1N1 infections significantly, but variably, reduced morbidity and mortality, pulmonary virus load and time to clearance in mice challenged with the H7N9 virus. In all cases, the recall of established CTL memory was characterized by earlier, greater airway infiltration of effectors targeting the conserved or cross-reactive H7N9 IAV peptides; though, depending on the priming IAV, each case was accompanied by distinct CTL epitope immunodominance hierarchies for the prominent K(b)PB(1703, D(b)PA(224), and D(b)NP(366) epitopes. While the presence of conserved, variable, or cross-reactive epitopes between the priming H9N2 and H1N1 and the challenge H7N9 IAVs clearly influenced any change in the immunodominance hierarchy, the changing patterns were not tied solely to epitope conservation. Furthermore, the total size of the IAV-specific memory CTL pool after priming was a better predictor of favorable outcomes than the extent of epitope conservation or secondary CTL expansion. Modifying the size of the memory CTL pool significantly altered its subsequent protective efficacy on disease severity or virus clearance, confirming the important role of heterologous priming. These findings establish that both the protective efficacy of heterosubtypic immunity and CTL immunodominance hierarchies are reflective of the immunological history of the host, a finding that has implications for understanding human CTL responses and the rational design of CTL-mediated vaccines.


Subject(s)
Epitopes, T-Lymphocyte/immunology , Immunity, Heterologous/immunology , Immunodominant Epitopes/immunology , Immunologic Memory/immunology , Influenza A Virus, H7N9 Subtype/immunology , Orthomyxoviridae Infections/immunology , T-Lymphocytes, Cytotoxic/immunology , Animals , Cross Reactions/immunology , Disease Models, Animal , Female , Flow Cytometry , Male , Mice , Mice, Inbred C57BL
16.
Proc Natl Acad Sci U S A ; 112(2): 548-53, 2015 Jan 13.
Article in English | MEDLINE | ID: mdl-25548189

ABSTRACT

The emergence of human infection with a novel H7N9 influenza virus in China raises a pandemic concern. Chicken H9N2 viruses provided all six of the novel reassortant's internal genes. However, it is not fully understood how the prevalence and evolution of these H9N2 chicken viruses facilitated the genesis of the novel H7N9 viruses. Here we show that over more than 10 y of cocirculation of multiple H9N2 genotypes, a genotype (G57) emerged that had changed antigenicity and improved adaptability in chickens. It became predominant in vaccinated farm chickens in China, caused widespread outbreaks in 2010-2013 before the H7N9 viruses emerged in humans, and finally provided all of their internal genes to the novel H7N9 viruses. The prevalence and variation of H9N2 influenza virus in farmed poultry could provide an important early warning of the emergence of novel reassortants with pandemic potential.


Subject(s)
Chickens/virology , Evolution, Molecular , Influenza A Virus, H7N9 Subtype/genetics , Influenza A Virus, H9N2 Subtype/genetics , Animals , Antigenic Variation/genetics , Antigens, Viral/genetics , China/epidemiology , Genes, Viral , Genetic Drift , Genotype , Hemagglutinin Glycoproteins, Influenza Virus/genetics , Hemagglutinin Glycoproteins, Influenza Virus/immunology , Humans , Influenza A Virus, H7N9 Subtype/immunology , Influenza A Virus, H7N9 Subtype/pathogenicity , Influenza A Virus, H9N2 Subtype/immunology , Influenza A Virus, H9N2 Subtype/pathogenicity , Influenza in Birds/epidemiology , Influenza in Birds/virology , Influenza, Human/epidemiology , Influenza, Human/virology , Pandemics , Phylogeny , Reassortant Viruses/genetics , Reassortant Viruses/immunology , Reassortant Viruses/pathogenicity , Retrospective Studies
17.
Nat Commun ; 5: 5029, 2014 Oct 09.
Article in English | MEDLINE | ID: mdl-25297528

ABSTRACT

Oseltamivir-resistant H1N1 influenza viruses carrying the H275Y neuraminidase mutation predominated worldwide during the 2007-2009 seasons. Although several neuraminidase substitutions were found to be necessary to counteract the adverse effects of H275Y, the order and impact of evolutionary events involved remain elusive. Here we reconstruct H1N1 neuraminidase phylogeny during 1999-2009, estimate the timing and order of crucial amino acid changes and evaluate their impact on the biological outcome of the H275Y mutation. Of the 12 neuraminidase substitutions that occurred during 1999-2009, 5 (chronologically, V234M, R222Q, K329E, D344N, H275Y and D354G) are necessary for maintaining full neuraminidase function in the presence of the H275Y mutation by altering protein accumulation or enzyme affinity/activity. The sequential emergence and cumulative effects of these mutations clearly illustrate a role for epistasis in shaping the emergence and subsequent evolution of a drug-resistant virus population, which can be useful in understanding emergence of novel viral phenotypes of influenza.


Subject(s)
Drug Resistance, Viral/genetics , Epistasis, Genetic/genetics , Evolution, Molecular , Influenza A Virus, H1N1 Subtype/enzymology , Mutation, Missense/genetics , Neuraminidase/genetics , Phylogeny , Animals , Base Sequence , Bayes Theorem , Dogs , Ferrets , Madin Darby Canine Kidney Cells , Models, Genetic , Molecular Sequence Data , Mutagenesis, Site-Directed , Oseltamivir , Reverse Transcriptase Polymerase Chain Reaction , Sequence Analysis, DNA
18.
J Virol ; 88(22): 12982-91, 2014 Nov.
Article in English | MEDLINE | ID: mdl-25210188

ABSTRACT

UNLABELLED: Since emerging in 2013, the avian-origin H7N9 influenza viruses have resulted in over 400 human infections, leading to 115 deaths to date. Although the epidemiology differs from human highly pathogenic avian H5N1 influenza virus infections, there is a similar rapid progression to acute respiratory distress syndrome. The aim of these studies was to compare the pathological and immunological characteristics of a panel of human H7N9 and H5N1 viruses in vitro and in vivo. Although there were similarities between particular H5N1 and H7N9 viruses, including association between lethal disease and spread to the alveolar spaces and kidney, there were also strain-specific differences. Both H5N1 and H7N9 viruses are capable of causing lethal infections, with mortality correlating most strongly with wider distribution of viral antigen in the lungs, rather than with traditional measures of virus titer and host responses. Strain-specific differences included hypercytokinemia in H5N1 infections that was not seen with the H7N9 infections regardless of lethality. Conversely, H7N9 viruses showed a greater tropism for respiratory epithelium covering nasal passages and nasopharynx-associated lymphoid tissue than H5N1 viruses, which may explain the enhanced transmission in ferret models. Overall, these studies highlight some distinctive properties of H5N1 and H7N9 viruses in different in vitro and in vivo models. IMPORTANCE: The novel avian-origin H7N9 pandemic represents a serious threat to public health. The ability of H7N9 to cause serious lung pathology, leading in some cases to the development of acute respiratory distress syndrome, is of particular concern. Initial reports of H7N9 infection compared them to infections caused by highly pathogenic avian (HPAI) H5N1 viruses. Thus, it is of critical importance to understand the pathology and immunological response to infection with H7N9 compared to HPAI H5N1 viruses. We compared these responses in both in vitro and in vivo models, and found that H5N1 and H7N9 infections exhibit distinct pathological, immunological, and tissue tropism differences that could explain differences in clinical disease and viral transmission.


Subject(s)
Cytokines/metabolism , Influenza A Virus, H5N1 Subtype/immunology , Influenza A Virus, H5N1 Subtype/physiology , Influenza A Virus, H7N9 Subtype/physiology , Influenza, Human/virology , Orthomyxoviridae Infections/virology , Viral Tropism , Animals , Cell Line , Cytokines/toxicity , Disease Models, Animal , Humans , Influenza A Virus, H5N1 Subtype/pathogenicity , Influenza A Virus, H7N9 Subtype/immunology , Influenza A Virus, H7N9 Subtype/pathogenicity , Lung/immunology , Lung/pathology , Lung/virology , Mice, Inbred C57BL , Orthomyxoviridae Infections/immunology , Orthomyxoviridae Infections/mortality , Orthomyxoviridae Infections/pathology , Survival Analysis
19.
J Biol Chem ; 289(37): 25405-17, 2014 Sep 12.
Article in English | MEDLINE | ID: mdl-25065577

ABSTRACT

Lipid metabolism plays a fundamental role during influenza virus replication, although key regulators of lipid-dependent trafficking and virus production remain inadequately defined. This report demonstrates that infection by influenza virus stimulates phospholipase D (PLD) activity and that PLD co-localizes with influenza during infection. Both chemical inhibition and RNA interference of PLD delayed viral entry and reduced viral titers in vitro. Although there may be contributions by both major isoenzymes, the effects on viral infectivity appear to be more dependent on the PLD2 isoenzyme. In vivo, PLD2 inhibition reduced virus titer and correlated with significant increases in transcription of innate antiviral effectors. The reduction in viral titer downstream of PLD2 inhibition was dependent on Rig-I (retinoic acid-inducible gene-1), IRF3, and MxA (myxovirus resistance gene A) but not IRF7. Inhibition of PLD2 accelerated the accumulation of MxA in foci as early as 30 min postinfection. Together these data suggest that PLD facilitates the rapid endocytosis of influenza virus, permitting viral escape from innate immune detection and effectors that are capable of limiting lethal infection.


Subject(s)
Immunity, Innate/genetics , Influenza, Human/virology , Orthomyxoviridae/genetics , Phospholipase D/biosynthesis , Cell Line , Endocytosis/genetics , Gene Expression Regulation, Viral , Humans , Influenza A Virus, H1N1 Subtype , Influenza, Human/genetics , Influenza, Human/pathology , Orthomyxoviridae/pathogenicity , Phospholipase D/antagonists & inhibitors , Phospholipase D/genetics , Phospholipids , RNA Interference , Virus Internalization , Virus Replication/genetics
20.
J Virol ; 87(17): 9911-22, 2013 Sep.
Article in English | MEDLINE | ID: mdl-23824818

ABSTRACT

Influenza virus entry is mediated by the acidic-pH-induced activation of hemagglutinin (HA) protein. Here, we investigated how a decrease in the HA activation pH (an increase in acid stability) influences the properties of highly pathogenic H5N1 influenza virus in mammalian hosts. We generated isogenic A/Vietnam/1203/2004 (H5N1) (VN1203) viruses containing either wild-type HA protein (activation pH 6.0) or an HA2-K58I point mutation (K to I at position 58) (activation pH 5.5). The VN1203-HA2-K58I virus had replication kinetics similar to those of wild-type VN1203 in MDCK and normal human bronchial epithelial cells and yet had reduced growth in human alveolar A549 cells, which were found to have a higher endosomal pH than MDCK cells. Wild-type and HA2-K58I viruses promoted similar levels of morbidity and mortality in C57BL/6J mice and ferrets, and neither virus transmitted efficiently to naive contact cage-mate ferrets. The acid-stabilizing HA2-K58I mutation, which diminishes H5N1 replication and transmission in ducks, increased the virus load in the ferret nasal cavity early during infection while simultaneously reducing the virus load in the lungs. Overall, a single, acid-stabilizing mutation was found to enhance the growth of an H5N1 influenza virus in the mammalian upper respiratory tract, and yet it was insufficient to enable contact transmission in ferrets in the absence of additional mutations that confer α(2,6) receptor binding specificity and remove a critical N-linked glycosylation site. The information provided here on the contribution of HA acid stability to H5N1 influenza virus fitness and transmissibility in mammals in the background of a non-laboratory-adapted virus provides essential information for the surveillance and assessment of the pandemic potential of currently circulating H5N1 viruses.


Subject(s)
Hemagglutinin Glycoproteins, Influenza Virus/chemistry , Hemagglutinin Glycoproteins, Influenza Virus/physiology , Influenza A Virus, H5N1 Subtype/physiology , Influenza A Virus, H5N1 Subtype/pathogenicity , Orthomyxoviridae Infections/transmission , Amino Acid Substitution , Animals , Cell Line , Dogs , Ferrets , Hemagglutinin Glycoproteins, Influenza Virus/genetics , Host Specificity/genetics , Humans , Hydrogen-Ion Concentration , Influenza A Virus, H5N1 Subtype/genetics , Mice , Mice, Inbred C57BL , Models, Molecular , Mutagenesis, Site-Directed , Protein Conformation , Protein Stability , Respiratory System/virology , Virulence/genetics , Virus Internalization
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