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1.
Biology (Basel) ; 11(12)2022 Dec 07.
Article in English | MEDLINE | ID: mdl-36552290

ABSTRACT

Rhizosphere microbiome is a dynamic and complex zone of microbial communities. This complex plant-associated microbial community, usually regarded as the plant's second genome, plays a crucial role in plant health. It is unquestioned that plant microbiome collectively contributes to plant growth and fitness. It also provides a safeguard from plant pathogens, and induces tolerance in the host against abiotic stressors. The revolution in omics, gene-editing and sequencing tools have somehow led to unravel the compositions and latent interactions between plants and microbes. Similarly, besides standard practices, many biotechnological, (bio)chemical and ecological methods have also been proposed. Such platforms have been solely dedicated to engineer the complex microbiome by untangling the potential barriers, and to achieve better agriculture output. Yet, several limitations, for example, the biological obstacles, abiotic constraints and molecular tools that capably impact plant microbiome engineering and functionality, remained unaddressed problems. In this review, we provide a holistic overview of plant microbiome composition, complexities, and major challenges in plant microbiome engineering. Then, we unearthed all inevitable abiotic factors that serve as bottlenecks by discouraging plant microbiome engineering and functionality. Lastly, by exploring the inherent role of micro/macrofauna, we propose economic and eco-friendly strategies that could be harnessed sustainably and biotechnologically for resilient plant microbiome engineering.

2.
Biol Res ; 48: 11, 2015 Feb 20.
Article in English | MEDLINE | ID: mdl-25762051

ABSTRACT

BACKGROUND: Cadmium (Cd) is well known as one of the most toxic metals affecting the environment and can severely restrict plant growth and development. In this study, Cd toxicities were studied in strawberry cv. Camarosa using pot experiment. Chlorophyll and malondialdehyde (MDA) contents, catalase (CAT), superoxide dismutase (SOD), ascorbate peroxidase (APX) activities and mineral nutrient concentrations were investigated in both roots and leaves of strawberry plant after exposure Cd. RESULTS: Cd content in both roots and leaves was increased with the application of increasing concentrations of Cd. We found higher Cd concentration in roots rather than in leaves. Chlorophyll a and b was decreased in leaves but MDA significantly increased under increased Cd concentration treatments in both roots and leaves. SOD and CAT activities was also increased with the increase Cd concentrations. K, Mn and Mg concentrations were found higher in leaves than roots under Cd stress. In general, increased Cd treatments increased K, Mg, Fe, Ca, Cu and Zn concentration in both roots and leaves. Excessive Cd treatments reduced chlorophyll contents, increased antioxidant enzyme activities and changes in plant nutrition concentrations in both roots and leaves. CONCLUSION: The results presented in this work suggested that Cd treatments have negative effect on chlorophyll content and nearly decreased 30% of plant growth in strawberry. Strawberry roots accumulated higher Cd than leaves. We found that MDA and antioxidant enzyme (CAT, SOD and APX) contents may have considered a good indicator in determining Cd tolerance in strawberry plant.


Subject(s)
Antioxidants/metabolism , Cadmium/toxicity , Chlorophyll/metabolism , Fragaria/drug effects , Micronutrients/metabolism , Ascorbate Peroxidases/analysis , Catalase/analysis , Chlorophyll/analysis , Chlorophyll A , Fragaria/metabolism , Lipid Peroxidation/drug effects , Magnesium/analysis , Malondialdehyde/analysis , Manganese/analysis , Plant Extracts/chemistry , Plant Leaves/chemistry , Plant Leaves/drug effects , Plant Roots/chemistry , Plant Roots/drug effects , Potassium/analysis , Superoxide Dismutase/analysis
3.
Biol Res ; 48: 2, 2015 Jan 13.
Article in English | MEDLINE | ID: mdl-25654659

ABSTRACT

BACKGROUND: The Eurasian grapevine (Vitis vinifera L.) is the most widely cultivated and economically important horticultural crop in the world. As a one of the origin area, Anatolia played an important role in the diversification and spread of the cultivated form V. vinifera ssp. vinifera cultivars and also the wild form V. vinifera ssp. sylvestris ecotypes. Although several biodiversity studies have been conducted with local cultivars in different regions of Anatolia, no information has been reported so far on the biochemical (organic acids, sugars, phenolic acids, vitamin C) and antioxidant diversity of local historical table V. vinifera cultivars grown in Igdir province. In this work, we studied these traits in nine local table grape cultivars viz. 'Beyaz Kismis' (synonym name of Sultanina or Thompson seedless), 'Askeri', 'El Hakki', 'Kirmizi Kismis', 'Inek Emcegi', 'Hacabas', 'Kerim Gandi', 'Yazen Dayi', and 'Miskali' spread in the Igdir province of Eastern part of Turkey. RESULTS: Variability of all studied parameters is strongly influenced by cultivars (P < 0.01). Among the cultivars investigated, 'Miskali' showed the highest citric acid content (0.959 g/l) while 'Kirmizi Kismis' produced predominant contents in tartaric acid (12.71 g/l). The highest glucose (16.47 g/100 g) and fructose (15.55 g/100 g) contents were provided with 'Beyaz Kismis'. 'Kirmizi Kismis' cultivar had also the highest quercetin (0.55 mg/l), o-coumaric acid (1.90 mg/l), and caffeic acid (2.73 mg/l) content. The highest ferulic acid (0.94 mg/l), and syringic acid (2.00 mg/l) contents were observed with 'Beyaz Kismis' cultivar. The highest antioxidant capacity was obtained as 9.09 µmol TE g(-1) from 'Inek Emcegi' in TEAC (Trolox equivalent Antioxidant Capacity) assay. 'Hacabas' cultivar had the highest vitamin C content of 35.74 mg/100 g. CONCLUSIONS: Present results illustrated that the historical table grape cultivars grown in Igdir province of Eastern part of Turkey contained diverse and valuable sugars, organic acids, phenolic acids, Vitamin C values and demonstrated important antioxidant capacity for human health benefits. Further preservation and use of this gene pool will be helpful to avoid genetic erosion and to promote continued agriculture in the region.


Subject(s)
Citric Acid/analysis , Dietary Carbohydrates/analysis , Fruit/chemistry , Polyphenols/analysis , Vitis/chemistry , Acids/analysis , Antioxidants/analysis , Ascorbic Acid/analysis , Caffeic Acids/analysis , Coumaric Acids/analysis , Crops, Agricultural/chemistry , Crops, Agricultural/classification , Gallic Acid/analogs & derivatives , Gallic Acid/analysis , Hydroxybenzoates/analysis , Tartrates/analysis , Turkey , Vitis/classification
4.
Biol. Res ; 48: 1-7, 2015. graf, tab
Article in English | LILACS | ID: biblio-950775

ABSTRACT

BACKGROUND: Cadmium (Cd) is well known as one of the most toxic metals affecting the environment and can severely restrict plant growth and development. In this study, Cd toxicities were studied in strawberry cv. Camarosa using pot experiment. Chlorophyll and malondialdehyde (MDA) contents, catalase (CAT), superoxide dismutase (SOD), ascorbate peroxidase (APX) activities and mineral nutrient concentrations were investigated in both roots and leaves of strawberry plant after exposure Cd. RESULTS: Cd content in both roots and leaves was increased with the application of increasing concentrations of Cd. We found higher Cd concentration in roots rather than in leaves. Chlorophyll a and b was decreased in leaves but MDA significantly increased under increased Cd concentration treatments in both roots and leaves. SOD and CAT activities was also increased with the increase Cd concentrations. K, Mn and Mg concentrations were found higher in leaves than roots under Cd stress. In general, increased Cd treatments increased K, Mg, Fe, Ca, Cu and Zn concentration in both roots and leaves. Excessive Cd treatments reduced chlorophyll contents, increased antioxidant enzyme activities and changes in plant nutrition concentrations in both roots and leaves. CONCLUSION: The results presented in this work suggested that Cd treatments have negative effect on chlorophyll content and nearly decreased 30% of plant growth in strawberry. Strawberry roots accumulated higher Cd than leaves. We found that MDA and antioxidant enzyme (CAT, SOD and APX) contents may have considered a good indicator in determining Cd tolerance in strawberry plant.


Subject(s)
Cadmium/toxicity , Chlorophyll/metabolism , Micronutrients/metabolism , Fragaria/drug effects , Antioxidants/metabolism , Potassium/analysis , Superoxide Dismutase/analysis , Plant Extracts/chemistry , Lipid Peroxidation/drug effects , Catalase/analysis , Chlorophyll/analysis , Plant Roots/drug effects , Plant Roots/chemistry , Plant Leaves/drug effects , Plant Leaves/chemistry , Fragaria/metabolism , Ascorbate Peroxidases/analysis , Chlorophyll A , Magnesium/analysis , Malondialdehyde/analysis , Manganese/analysis
5.
Biol. Res ; 48: 1-8, 2015. tab
Article in English | LILACS | ID: lil-734615

ABSTRACT

BACKGROUND: The Eurasian grapevine (Vitis vinifera L.) is the most widely cultivated and economically important horticultural crop in the world. As a one of the origin area, Anatolia played an important role in the diversification and spread of the cultivated form V. vinifera ssp. vinifera cultivars and also the wild form V. vinifera ssp. sylvestris ecotypes. Although several biodiversity studies have been conducted with local cultivars in different regions of Anatolia, no information has been reported so far on the biochemical (organic acids, sugars, phenolic acids, vitamin C) and antioxidant diversity of local historical table V. vinifera cultivars grown in Igdir province. In this work, we studied these traits in nine local table grape cultivars viz. 'Beyaz Kismis' (synonym name of Sultanina or Thompson seedless), 'Askeri', 'El Hakki', 'Kirmizi Kismis', 'Inek Emcegi', 'Hacabas', 'Kerim Gandi', 'Yazen Dayi', and 'Miskali' spread in the Igdir province of Eastern part of Turkey. RESULTS: Variability of all studied parameters is strongly influenced by cultivars (P < 0.01). Among the cultivars investigated, 'Miskali' showed the highest citric acid content (0.959 g/l) while 'Kirmizi Kismis' produced predominant contents in tartaric acid (12.71 g/l). The highest glucose (16.47 g/100 g) and fructose (15.55 g/100 g) contents were provided with 'Beyaz Kismis'. 'Kirmizi Kismis' cultivar had also the highest quercetin (0.55 mg/l), o-coumaric acid (1.90 mg/l), and caffeic acid (2.73 mg/l) content. The highest ferulic acid (0.94 mg/l), and syringic acid (2.00 mg/l) contents were observed with 'Beyaz Kismis' cultivar. The highest antioxidant capacity was obtained as 9.09 μmol TE g-1 from 'Inek Emcegi' in TEAC (Trolox equivalent Antioxidant Capacity) assay. 'Hacabas' cultivar had the highest vitamin C content of 35.74 mg/100 g. CONCLUSIONS: Present results illustrated that the historical table grape cultivars grown in Igdir province of Eastern part of Turkey contained diverse and valuable sugars, organic acids, phenolic acids, Vitamin C values and demonstrated important antioxidant capacity for human health benefits. Further preservation and use of this gene pool will be helpful to avoid genetic erosion and to promote continued agriculture in the region.


Subject(s)
Citric Acid/analysis , Dietary Carbohydrates/analysis , Fruit/chemistry , Polyphenols/analysis , Vitis/chemistry , Acids/analysis , Antioxidants/analysis , Ascorbic Acid/analysis , Caffeic Acids/analysis , Coumaric Acids/analysis , Crops, Agricultural/chemistry , Crops, Agricultural/classification , Gallic Acid/analysis , Gallic Acid/analogs & derivatives , Hydroxybenzoates/analysis , Turkey , Tartrates/analysis , Vitis/classification
6.
Biol Res ; 47: 46, 2014 Sep 23.
Article in English | MEDLINE | ID: mdl-25288225

ABSTRACT

BACKGROUND: Turkey is the main apricot producer in the world and apricots have been produced under both dry and irrigated conditions in the country. In this study, phenolic compounds and vitamins in fruits of one wild (Zerdali) and three main apricot cultivars ('Cataloglu', 'Hacihaliloglu' and 'Kabaasi') grown in both dry and irrigated conditions in Malatya provinces in Turkey were investigated. RESULTS: The findings indicated that higher content of phenolic compounds and vitamins was found in apricot fruits grown in irrigated conditions. Among the cultivars, 'Cataloglu' had the highest rutin contents both in irrigated and dry farming conditions as 2855 µg in irrigated and 6952 µg per 100 g dried weight base in dry conditions and the highest chlorogenic acid content in irrigated and dry farming conditions were measured in fruits of 'Hacihaliloglu' cultivar as 7542 µg and 15251 µg per 100 g dried weight base. Vitamin C contents in homogenates of fruit flesh and skin was found to be higher than ß-caroten, retinol, vitamin E and lycopen contents in apricot fruits both in irrigated and dry farming conditions. CONCLUSION: The results suggested that apricot fruits grown in both dry and irrigated conditions had high health benefits phytochemicals and phytochemical content varied among cultivars and irrigation conditions as well. However, more detailed biological and pharmacological studies are needed for the demonstration and clarification of health benefits of apricot fruits.


Subject(s)
Agricultural Irrigation/methods , Crops, Agricultural/metabolism , Fruit/metabolism , Phenols/analysis , Prunus/metabolism , Vitamins/analysis , Carotenoids/analysis , Chromatography, High Pressure Liquid , Crops, Agricultural/classification , Crops, Agricultural/growth & development , Fruit/growth & development , Lycopene , Prunus/growth & development , Turkey , Vitamin A/analysis , Vitamin E/analysis , beta Carotene/analysis
7.
Biol Res ; 47: 21, 2014 May 30.
Article in English | MEDLINE | ID: mdl-25028120

ABSTRACT

BACKGROUND: The Hawthorn (Crateagus sp.) mostly occurs around the temperate region of the world with a high number of species, producing a fruit with numerous beneficial effects for human health. The aim of the study was to determine organic acid and sugar contents in the fruit of a number of hawthorn species grown in Erzincan province of Turkey. RESULTS: Citric acid was the predominant organic acid in all hawthorn species and C. pseudoheterophylla had the highest citric acid content (23.688 g/100 g). There were not statistically significant differences among hawthorn species (except C. atrosanguinea Pojark) in terms of fumaric acid content. C.pontica C.Koch had a higher content of vitamin C (9.418 mg/100 g) compared to other species. Fructose was the predominant sugar component in all species and C. monogyna subsp. monogyna Joiq had the highest fructose content (18.378 g/100 g). CONCLUSIONS: The high fruit quality of the studied species indicates the importance of this fruit in human nutrition as a natural source. The study revealed that there were differences in terms of fruit characteristics among hawthorn species and thus better quality hawthorn genotypes can be selected within the species. Hence, this study is considered to be a valuable reference for forthcoming studies. The high fruit quality of the studied species indicates the importance of this fruit in human nutrition as a natural source.


Subject(s)
Ascorbic Acid/analysis , Citric Acid/analysis , Crataegus/chemistry , Fructose/analysis , Fruit/chemistry , Nutritive Value , Crops, Agricultural/chemistry , Dicarboxylic Acids/analysis , Dietary Carbohydrates/analysis , Glucose/analysis , Plant Extracts/analysis , Sucrose/analysis , Turkey
8.
Biol Res ; 47: 23, 2014 May 30.
Article in English | MEDLINE | ID: mdl-25028256

ABSTRACT

BACKGROUND: In recent years, the desire to adopt a healthy diet has drawn attention to legume seeds and food products derived from them. Mash bean is an important legume crop used in Pakistan however a systematic mapping of the chemical composition of mash bean seeds is lacking. Therefore seeds of four mash bean (Vigna mungo (L.) Hepper, family Leguminoseae) cultivars (NARC-Mash-1, NARC-Mash-2, NARC-Mash-3, NARC-Mash-97) commonly consumed in Pakistan have been analyzed for their chemical composition, antioxidant potential and biological activities like inhibition of formation of advanced glycation end products (AGE) activity and tyrosinase inhibition activity. RESULTS: The investigated cultivars varied in terms of biochemical composition to various extents. Mineral composition indicated potassium and zinc in highest and lowest amounts respectively, in all cultivars. The amino acid profile in protein of these cultivars suggested cysteine is present in lowest quantity in all cultivars while fatty acid distribution pattern indicated unsaturated fatty acids as major fatty acids in all cultivars. All cultivars were found to be rich source of tocopherols and sterols. Fourier transform infrared spectroscopy (FTIR) fingerprints of seed flour and extracts indicated major functional groups such as polysaccharides, lipids, amides, amines and amino acids. Results indicated that all investigated cultivars possessed appreciable antioxidant potential. CONCLUSIONS: All cultivars are rich source of protein and possess sufficient content of dietary fiber, a balanced amino acid profile, low saturated fatty acids and antioxidant capacity that rationalizes many traditional uses of seeds of this crop besides its nutritional importance. The collected data will be useful for academic and corporate researchers, nutritionists and clinical dieticians as well as consumers. If proper attention is paid, it may become an important export commodity and may fetch considerable foreign exchange for Pakistan.


Subject(s)
Crops, Agricultural/chemistry , Fabaceae/chemistry , Seeds/chemistry , Antioxidants/metabolism , Crops, Agricultural/metabolism , Cysteine/analysis , Fabaceae/metabolism , Flavonoids/analysis , Free Radical Scavengers , Glycation End Products, Advanced/metabolism , Monophenol Monooxygenase/antagonists & inhibitors , Niacin/analysis , Nutritive Value , Pakistan , Phenols/analysis , Plant Extracts/chemistry , Reducing Agents/metabolism , Riboflavin/analysis , Seeds/metabolism , Sterols/analysis , Tannins/analysis , Thiamine/analysis , Tocopherols/analysis , Trace Elements/analysis
9.
Biol Res ; 47: 12, 2014 Apr 01.
Article in English | MEDLINE | ID: mdl-25052892

ABSTRACT

BACKGROUND: Current study has been designed to evaluate the chemical composition of essential and fixed oils from stem and leaves of Perovskia abrotanoides and antioxidant and antimicrobial activities of these oils. RESULTS: GC-MS analysis of essential oil identified 19 compounds with (E)-9-dodecenal being the major component in stem and hexadecanoic acid in leaves. In contrast, GC-MS analysis of fixed oil showed 40 constituents with α-amyrin the major component in stem and α-copaene in leaves. The antioxidant activity showed the highest value of 76.7% in essential oil from leaves in comparison with fixed oil from stem (45.9%) through inhibition of peroxidation in linoleic acid system. The antimicrobial assay tested on different microorganisms (e.g. E. coli, S. aureus, B. cereus, Nitrospira, S. epidermis, A. niger, A. flavus and C. albicans) showed the higher inhibition zone at essential oil from leaves (15.2 mm on B. cereus) as compared to fixed oil from stem (8.34 mm on S. aureus) and leaves (11.2 mm on S. aureus). CONCLUSIONS: The present study revealed the fact that essential oil analyzed from Perovskia abrotanoides stem and leaves could be a promising source of natural products with potential antioxidant and antimicrobial activities, as compared to fixed oil.


Subject(s)
Anti-Infective Agents/chemistry , Antioxidants/chemistry , Lamiaceae/chemistry , Plant Leaves/chemistry , Plant Oils/pharmacology , Plant Stems/chemistry , Alkanes/analysis , Alkanes/pharmacology , Anti-Infective Agents/pharmacology , Antioxidants/pharmacology , Aspergillus/drug effects , Bacillus cereus/drug effects , Candida albicans/drug effects , Disk Diffusion Antimicrobial Tests , Escherichia coli/drug effects , Gas Chromatography-Mass Spectrometry , Lipid Peroxidation/drug effects , Methyl Ethers/analysis , Methyl Ethers/pharmacology , Microbial Sensitivity Tests , Oils, Volatile/chemistry , Oleanolic Acid/analogs & derivatives , Oleanolic Acid/analysis , Oleanolic Acid/pharmacology , Palmitic Acid/analysis , Palmitic Acid/pharmacology , Pentacyclic Triterpenes/analysis , Pentacyclic Triterpenes/pharmacology , Plant Oils/chemistry , Reducing Agents/analysis , Sesquiterpenes/analysis , Sesquiterpenes/pharmacology , Staphylococcus/drug effects , Stearic Acids/analysis , Stearic Acids/pharmacology
10.
Biol Res ; 47: 71, 2014 Dec 16.
Article in English | MEDLINE | ID: mdl-25723734

ABSTRACT

BACKGROUND: Rootstocks play an essential role to determining orchard performance of fruit trees. Pyrus communis and Cydonia oblonga are widely used rootstocks for European pear cultivars. The lack of rootstocks adapted to different soil conditions and different grafted cultivars is widely acknowledged in pear culture. Cydonia rootstocks (clonal) and Pyrus rootstocks (seedling or clonal) have their advantages and disadvantages. In each case, site-specific environmental characteristics, specific cultivar response and production objectives must be considered before choosing the best rootstock. In this study, the influence of three Quince (BA 29, Quince A = MA, Quince C = MC) and a local European pear seedling rootstocks on the scion yield, some fruit quality characteristics and leaf macro (N, P, K, Ca and Mg) and micro element (Fe, Zn, Cu, Mn and B) content of 'Santa Maria' pear (Pyrus communis L.) were investigated. RESULTS: Trees on seedling rootstock had the highest annual yield, highest cumulative yield (kg tree(-1)), largest trunk cross-sectional area (TCSA), lowest yield efficiency and lowest cumulative yield (ton ha(-1)) in the 10(th) year after planting. The rootstocks had no significant effect on average fruit weight and fruit volume. Significantly higher fruit firmness was obtained on BA 29 and Quince A. The effect of rootstocks on the mineral element accumulation (N, K, Ca, Mg, Fe, Zn, Cu, Mn and B) was significant. Leaf analysis showed that rootstocks used had different mineral uptake efficiencies throughout the early season. CONCLUSION: The results showed that the rootstocks strongly affected fruit yield, fruit quality and leaf mineral element uptake of 'Santa Maria' pear cultivar. Pear seedling and BA 29 rootstock found to be more prominent in terms of several characteristics for 'Santa Maria' pear cultivar that is grown in highly calcareous soil in semi-arid climate conditions. We determined the highest N, P (although insignificant), K, Ca, Mg, Fe and Cu mineral element concentrations on the pear seedling and BA 29 rootstocks. According to the results, we recommend the seedling rootstock for normal density plantings (400 trees ha(-1)) and BA 29 rootstock for high-density plantings (800 trees ha(-1)) for 'Santa Maria' pear cultivar in semi-arid conditions.


Subject(s)
Crop Production/methods , Desert Climate , Fruit/metabolism , Plant Leaves/chemistry , Plant Roots/metabolism , Pyrus , Boron/analysis , Calcium/analysis , Copper/analysis , Iron/analysis , Magnesium/analysis , Manganese/analysis , Nitrogen/analysis , Phosphorus/analysis , Potassium/analysis , Pyrus/chemistry , Pyrus/classification , Pyrus/growth & development , Rain , Rosaceae/physiology , Seedlings/growth & development , Seedlings/physiology , Soil , Temperature , Turkey , Zinc/analysis
11.
Biol. Res ; 47: 1-9, 2014. graf, tab
Article in English | LILACS | ID: lil-710935

ABSTRACT

BACKGROUND: Current study has been designed to evaluate the chemical composition of essential and fixed oils from stem and leaves of Perovskia abrotanoides and antioxidant and antimicrobial activities of these oils. RESULTS: GC-MS analysis of essential oil identified 19 compounds with (E)-9-dodecenal being the major component in stem and hexadecanoic acid in leaves. In contrast, GC-MS analysis of fixed oil showed 40 constituents with α-amyrin the major component in stem and α-copaene in leaves. The antioxidant activity showed the highest value of 76.7% in essential oil from leaves in comparison with fixed oil from stem (45.9%) through inhibition of peroxidation in linoleic acid system. The antimicrobial assay tested on different microorganisms (e.g. E. coli, S. aureus, B. cereus, Nitrospira, S. epidermis, A. niger, A. flavus and C. albicans) showed the higher inhibition zone at essential oil from leaves (15.2 mm on B. cereus) as compared to fixed oil from stem (8.34 mm onS. aureus) and leaves (11.2 mm on S. aureus). CONCLUSIONS: The present study revealed the fact that essential oil analyzed from Perovskia abrotanoides stem and leaves could be a promising source of natural products with potential antioxidant and antimicrobial activities, as compared to fixed oil.


Subject(s)
Anti-Infective Agents/chemistry , Antioxidants/chemistry , Lamiaceae/chemistry , Plant Leaves/chemistry , Plant Oils/pharmacology , Plant Stems/chemistry , Alkanes/analysis , Alkanes/pharmacology , Anti-Infective Agents/pharmacology , Antioxidants/pharmacology , Aspergillus/drug effects , Bacillus cereus/drug effects , Candida albicans/drug effects , Disk Diffusion Antimicrobial Tests , Escherichia coli/drug effects , Gas Chromatography-Mass Spectrometry , Lipid Peroxidation/drug effects , Microbial Sensitivity Tests , Methyl Ethers/analysis , Methyl Ethers/pharmacology , Oils, Volatile/chemistry , Oleanolic Acid/analysis , Oleanolic Acid/analogs & derivatives , Oleanolic Acid/pharmacology , Palmitic Acid/analysis , Palmitic Acid/pharmacology , Pentacyclic Triterpenes/analysis , Pentacyclic Triterpenes/pharmacology , Plant Oils/chemistry , Reducing Agents/analysis , Sesquiterpenes/analysis , Sesquiterpenes/pharmacology , Staphylococcus/drug effects , Stearic Acids/analysis , Stearic Acids/pharmacology
12.
Biol. Res ; 47: 1-14, 2014. graf, tab
Article in English | LILACS | ID: biblio-950719

ABSTRACT

BACKGROUND: In recent years, the desire to adopt a healthy diet has drawn attention to legume seeds and food products derived from them. Mash bean is an important legume crop used in Pakistan however a systematic mapping of the chemical composition of mash bean seeds is lacking. Therefore seeds of four mash bean (Vigna mungo (L.) Hepper, family Leguminoseae) cultivars (NARC-Mash-1, NARC-Mash-2, NARC-Mash-3, NARC-Mash-97) commonly consumed in Pakistan have been analyzed for their chemical composition, antioxidant potential and biological activities like inhibition of formation of advanced glycation end products (AGE) activity and tyrosinase inhibition activity. RESULTS: The investigated cultivars varied in terms of biochemical composition to various extents. Mineral composition indicated potassium and zinc in highest and lowest amounts respectively, in all cultivars. The amino acid profile in protein of these cultivars suggested cysteine is present in lowest quantity in all cultivars while fatty acid distribution pattern indicated unsaturated fatty acids as major fatty acids in all cultivars. All cultivars were found to be rich source of tocopherols and sterols. Fourier transform infrared spectroscopy (FTIR) fingerprints of seed flour and extracts indicated major functional groups such as polysaccharides, lipids, amides, amines and amino acids. Results indicated that all investigated cultivars possessed appreciable antioxidant potential. CONCLUSIONS: All cultivars are rich source of protein and possess sufficient content of dietary fiber, a balanced amino acid profile, low saturated fatty acids and antioxidant capacity that rationalizes many traditional uses of seeds of this crop besides its nutritional importance. The collected data will be useful for academic and corporate researchers, nutritionists and clinical dieticians as well as consumers. If proper attention is paid, it may become an important export commodity and may fetch considerable foreign exchange for Pakistan.


Subject(s)
Seeds/chemistry , Crops, Agricultural/chemistry , Fabaceae/chemistry , Pakistan , Phenols/analysis , Riboflavin/analysis , Seeds/metabolism , Sterols/analysis , Tannins/analysis , Thiamine/analysis , Trace Elements/analysis , Flavonoids/analysis , Plant Extracts/chemistry , Free Radical Scavengers , Monophenol Monooxygenase/antagonists & inhibitors , Glycation End Products, Advanced/metabolism , Crops, Agricultural/metabolism , Reducing Agents/metabolism , Cysteine/analysis , Tocopherols/analysis , Fabaceae/metabolism , Niacin/analysis , Antioxidants/metabolism , Nutritive Value
13.
Biol. Res ; 47: 1-5, 2014. tab
Article in English | LILACS | ID: biblio-950717

ABSTRACT

BACKGROUND: The Hawthorn (Crateagus sp.) mostly occurs around the temperate region of the world with a high number of species, producing a fruit with numerous beneficial effects for human health. The aim of the study was to determine organic acid and sugar contents in the fruit of a number of hawthorn species grown in Erzincan province of Turkey. RESULTS: Citric acid was the predominant organic acid in all hawthorn species and C. pseudoheterophylla had the highest citric acid content (23.688 g/100 g). There were not statistically significant differences among hawthorn species (except C. atrosanguinea Pojark) in terms of fumaric acid content. C. pontica C.Koch had a higher content of vitamin C (9.418 mg/100 g) compared to other species. Fructose was the predominant sugar component in all species and C. monogyna subsp. monogyna Joiq had the highest fructose content (18.378 g/100 g). CONCLUSIONS: The high fruit quality of the studied species indicates the importance of this fruit in human nutrition as a natural source. The study revealed that there were differences in terms of fruit characteristics among hawthorn species and thus better quality hawthorn genotypes can be selected within the species. Hence, this study is considered to be a valuable reference for forthcoming studies. The high fruit quality of the studied species indicates the importance of this fruit in human nutrition as a natural source.


Subject(s)
Ascorbic Acid/analysis , Citric Acid/analysis , Crataegus/chemistry , Fructose/analysis , Fruit/chemistry , Nutritive Value , Sucrose/analysis , Turkey , Dietary Carbohydrates/analysis , Plant Extracts/analysis , Crops, Agricultural/chemistry , Dicarboxylic Acids/analysis , Glucose/analysis
14.
Biol. Res ; 47: 1-8, 2014. graf, tab
Article in English | LILACS | ID: biblio-950767

ABSTRACT

BACKGROUND: Rootstocks play an essential role to determining orchard performance of fruit trees. Pyrus communisand Cydonia oblonga are widely used rootstocks for European pear cultivars. The lack of rootstocks adapted to different soil conditions and different grafted cultivars is widely acknowledged in pear culture. Cydonia rootstocks (clonal) and Pyrus rootstocks (seedling or clonal) have their advantages and disadvantages. In each case, site-specific environmental characteristics, specific cultivar response and production objectives must be considered before choosing the best rootstock. In this study, the influence of three Quince (BA 29, Quince A = MA, Quince C = MC) and a local European pear seedling rootstocks on the scion yield, some fruit quality characteristics and leaf macro (N, P, K, Ca and Mg) and micro element (Fe, Zn, Cu, Mn and B) content of 'Santa Maria' pear (Pyrus communis L.) were investigated. RESULTS: Trees on seedling rootstock had the highest annual yield, highest cumulative yield (kg tree(-1)), largest trunk cross-sectional area (TCSA), lowest yield efficiency and lowest cumulative yield (ton ha(-1)) in the 10th year after planting. The rootstocks had no significant effect on average fruit weight and fruit volume. Significantly higher fruit firmness was obtained on BA 29 and Quince A. The effect of rootstocks on the mineral element accumulation (N, K, Ca, Mg, Fe, Zn, Cu, Mn and B) was significant. Leaf analysis showed that rootstocks used had different mineral uptake efficiencies throughout the early season. CONCLUSION: The results showed that the rootstocks strongly affected fruit yield, fruit quality and leaf mineral element uptake of 'Santa Maria' pear cultivar. Pear seedling and BA 29 rootstock found to be more prominent in terms of several characteristics for 'Santa Maria' pear cultivar that is grown in highly calcareous soil in semi-arid climate conditions. We determined the highest N, P (although insignificant), K, Ca, Mg, Fe and Cu mineral element concentrations on the pear seedling and BA 29 rootstocks. According to the results, we recommend the seedling rootstock for normal density plantings (400 trees ha(-1)) and BA 29 rootstock for high-density plantings (800 trees ha(-1)) for 'Santa Maria' pear cultivar in semi-arid conditions.


Subject(s)
Plant Roots/metabolism , Plant Leaves/chemistry , Pyrus/classification , Pyrus/growth & development , Pyrus/chemistry , Desert Climate , Crop Production/methods , Fruit/metabolism , Phosphorus/analysis , Potassium/analysis , Rain , Soil , Temperature , Turkey , Zinc/analysis , Boron/analysis , Calcium/analysis , Copper/analysis , Rosaceae/physiology , Seedlings/growth & development , Seedlings/physiology , Iron/analysis , Magnesium/analysis , Manganese/analysis , Nitrogen/analysis
15.
Biol. Res ; 47: 1-6, 2014. tab
Article in English | LILACS | ID: biblio-950742

ABSTRACT

BACKGROUND: Turkey is the main apricot producer in the world and apricots have been produced under both dry and irrigated conditions in the country. In this study, phenolic compounds and vitamins in fruits of one wild (Zerdali) and three main apricot cultivars ('Cataloglu', 'Hacihaliloglu' and 'Kabaasi') grown in both dry and irrigated conditions in Malatya provinces in Turkey were investigated. RESULTS: The findings indicated that higher content of phenolic compounds and vitamins was found in apricot fruits grown in irrigated conditions. Among the cultivars, 'Cataloglu' had the highest rutin contents both in irrigated and dry farming conditions as 2855 µg in irrigated and 6952 µg per 100 g dried weight base in dry conditions and the highest chlorogenic acid content in irrigated and dry farming conditions were measured in fruits of 'Hacihaliloglu' cultivar as 7542 µg and 15251 µg per 100 g dried weight base. Vitamin C contents in homogenates of fruit flesh and skin was found to be higher than ß-caroten, retinol, vitamin E and lycopen contents in apricot fruits both in irrigated and dry farming conditions. CONCLUSION: The results suggested that apricot fruits grown in both dry and irrigated conditions had high health benefits phytochemicals and phytochemical content varied among cultivars and irrigation conditions as well. However, more detailed biological and pharmacological studies are needed for the demonstration and clarification of health benefits of apricot fruits.


Subject(s)
Phenols/analysis , Vitamins/analysis , Crops, Agricultural/metabolism , Prunus/metabolism , Agricultural Irrigation/methods , Fruit/metabolism , Turkey , Vitamin A/analysis , Vitamin E/analysis , Carotenoids/analysis , Chromatography, High Pressure Liquid , Crops, Agricultural/classification , Crops, Agricultural/growth & development , beta Carotene/analysis , Prunus/growth & development , Lycopene , Fruit/growth & development
16.
Biol Res ; 45(4): 375-9, 2012.
Article in English | MEDLINE | ID: mdl-23558994

ABSTRACT

Methanolic extracts of different parts of five medicinal plants, Ferula assafoetidaL. resin, Grewia asiaticaL. leaves, Ipomoea hederaceaJacq. seeds, Lepidium sativumL. seeds and Terminalia chebulaRetz. fruits were tested in vitrofor their cytotoxic, phytotoxic, insecticidal, nematicidal and anthelmintic activities. Ipomoea hederaceashowed very significant phytotoxic and cytotoxic activity, with 100% inhibition of Lemna minorgrowth and 100% death of Artemia salinaat concentrations of 1000 and 100 µg mL-1. Grewia asiaticaexhibited very weak activities while Lepidium sativumand Ferula assafoetidashowed moderate to good potential in all three bioassays. The results suggest screening of Ipomoea hederaceaseeds further for isolation of bioactive compounds that may be responsible for its toxic potential.


Subject(s)
Plant Extracts/pharmacology , Animals , Ferula/chemistry , Grewia/chemistry , Ipomoea/chemistry , Lepidium sativum/chemistry , Pakistan , Plant Extracts/classification , Terminalia/chemistry
17.
Biol. Res ; 45(4): 375-379, 2012. ilus
Article in English | LILACS | ID: lil-668689

ABSTRACT

Methanolic extracts of different parts of five medicinal plants, Ferula assafoetidaL. resin, Grewia asiaticaL. leaves, Ipomoea hederaceaJacq. seeds, Lepidium sativumL. seeds and Terminalia chebulaRetz. fruits were tested in vitrofor their cytotoxic, phytotoxic, insecticidal, nematicidal and anthelmintic activities. Ipomoea hederaceashowed very significant phytotoxic and cytotoxic activity, with 100% inhibition of Lemna minorgrowth and 100% death of Artemia salinaat concentrations of 1000 and 100 µg mL-1. Grewia asiaticaexhibited very weak activities while Lepidium sativumand Ferula assafoetidashowed moderate to good potential in all three bioassays. The results suggest screening of Ipomoea hederaceaseeds further for isolation of bioactive compounds that may be responsible for its toxic potential.


Subject(s)
Animals , Plant Extracts/pharmacology , Ferula/chemistry , Grewia/chemistry , Ipomoea/chemistry , Lepidium sativum/chemistry , Pakistan , Plant Extracts/classification , Terminalia/chemistry
18.
Biol Res ; 44(4): 345-50, 2011.
Article in English | MEDLINE | ID: mdl-22446597

ABSTRACT

The Coruh Valley, located in Northeastern Turkey, is one of the most important centers of diversity in pomegranate in Turkey. In this study, we attempted to characterize 19 promising pomegranate genotypes originating from the Coruh Valley in using fluorescent dye AFLP markers and capillary electrophoresis. Four AFLP primer combinations were used, generating a total of 297 fragments, 213 of which were polymorphic (73.0%). Resolving powers of the AFLP primers ranged from 0.700 to 1.018, with a total of 3.440, while polymorphism information contents ranged from 0.707 to 0.837 with an average of 0.764. UPGMA clustering of the genotypes showed two major groups. Most of the fruit characteristics of the genotypes within the same group were variable. Therefore, the results showed that molecular characterization is necessary to get reliable relationships among pomegranate genotypes and AFLP markers can be used effectively in pomegranate.


Subject(s)
Amplified Fragment Length Polymorphism Analysis , Lythraceae/genetics , Polymorphism, Genetic/genetics , Cluster Analysis , Electrophoresis, Capillary , Fluorescent Dyes , Genetic Markers , Genotype , Turkey
19.
Biol. Res ; 44(4): 345-350, 2011. ilus, tab
Article in English | LILACS | ID: lil-626733

ABSTRACT

The Coruh Valley, located in Northeastern Turkey, is one of the most important centers of diversity in pomegranate in Turkey. In this study, we attempted to characterize 19 promising pomegranate genotypes originating from the Coruh Valley in using fluorescent dye AFLP markers and capillary electrophoresis. Four AFLP primer combinations were used, generating a total of 297 fragments, 213 of which were polymorphic (73.0%). Resolving powers of the AFLP primers ranged from 0.700 to 1.018, with a total of 3.440, while polymorphism information contents ranged from 0.707 to 0.837 with an average of 0.764. UPGMA clustering of the genotypes showed two major groups. Most of the fruit characteristics of the genotypes within the same group were variable. Therefore, the results showed that molecular characterization is necessary to get reliable relationships among pomegranate genotypes and AFLP markers can be used effectively in pomegranate.


Subject(s)
Amplified Fragment Length Polymorphism Analysis , Polymorphism, Genetic/genetics , Lythraceae/genetics , Cluster Analysis , Electrophoresis, Capillary , Fluorescent Dyes , Genetic Markers , Genotype , Turkey
20.
Biol Res ; 43(1): 91-8, 2010.
Article in English | MEDLINE | ID: mdl-21157636

ABSTRACT

The effects of plant growth promoting rhizobacteria (PGPR) on the rooting and root growth of semi-hardwood and hardwood kiwifruit stem cuttings were investigated. The PGPR used were Bacillus RC23, Paenibacillus polymyxa RC05, Bacillus subtilis OSU142, Bacillus RC03, Comamonas acidovorans RC41, Bacillus megaterium RC01 and Bacillus simplex RC19. All the bacteria showed indole-3-acetic acid (IAA) producing capacity. Among the PGPR used, the highest rooting ratios were obtained at 47.50% for semi-hardwood stem cuttings from Bacillus RC03 and Bacillus simplex RC19 treatments and 42.50% for hardwood stem cuttings from Bacillus RC03. As well, Comamonas acidovorans RC41 inoculations indicated higher value than control treatments. The results suggest that these PGPR can be used in organic nursery material production and point to the feasibility of synthetic auxin (IBA) replacement by organic management based on PGPR.


Subject(s)
Actinidia/growth & development , Indoleacetic Acids/pharmacology , Plant Growth Regulators/pharmacology , Plant Roots/growth & development , Plant Stems/growth & development , Actinidia/drug effects , Bacillus/chemistry , Delftia acidovorans/chemistry , Paenibacillus/chemistry , Plant Roots/drug effects , Plant Stems/drug effects
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