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1.
Int J Biol Macromol ; 269(Pt 1): 132033, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38702000

ABSTRACT

The role of mannanases is diverse and they are used in many industrial applications, in animal feed, in the food industry and in healthcare. They are also applied in biomass processing, because they play an important role in the breakdown of hemicellulose. Among the mannanase inhibitors, heavy metal ions and general enzyme inhibitors are mainly mentioned. Unfortunately, almost no data are available on carbohydrate-based natural inhibitors of mannanases. According to the literature, carbohydrates do not play an important role in the inhibition of mannanases, so neither do oligosaccharides. This is in contrast to the action and inhibition of other O-glycosyl hydrolases. My hypothesis is that mannanases, like other polysaccharide-degrading enzymes, work in the same way and can be inhibited by oligosaccharides. Evidence from docking and modeling results supports and makes probable the hypothesis that oligosaccharides can inhibit the activity of mannanases, similar to the inhibition of other O-glycosyl hydrolases. Among natural carbohydrate oligomers, several potential mannanase inhibitors have been identified and characterized. In addition to expensive research, it is very important to use research based on cheaper modeling to explore the processes. The results obtained are novel and forward-looking, enabling in-depth and targeted research to be carried out.


Subject(s)
Enzyme Inhibitors , Mannosidases , Enzyme Inhibitors/chemistry , Enzyme Inhibitors/pharmacology , Mannosidases/antagonists & inhibitors , Mannosidases/metabolism , Mannosidases/chemistry , Molecular Docking Simulation , Oligosaccharides/chemistry , Oligosaccharides/pharmacology , Hydrolysis
2.
Pathol Oncol Res ; 28: 1610607, 2022.
Article in English | MEDLINE | ID: mdl-36277960

ABSTRACT

EGFR mutation in non-small cell lung cancer (NSCLC) offers a potential therapeutic target for tyrosine kinase inhibitor (TKI) therapy. The majority of these cases, however eventually develop therapy resistance, mainly by acquiring EGFR T790M mutation. Recently, third-generation TKIs have been introduced to overcome T790M mutation-related resistance. Cell free circulating tumor DNA (liquid biopsy) has emerged as a valuable alternative method for T790M mutation detection during patient follow up, when a tissue biopsy cannot be obtained for analysis. In this study, we summarized our experience with Super-ARMS EGFR Mutation Detection Kit (AmoyDx) on 401 samples of 242 NSCLC patients in a 3-year period in Hungary, comprising 364 plasma and 37 non-plasma samples. We also compared the performance of two commercially available detection kits, the cobas EGFR Mutation test v2 (Roche) and the Super-ARMS EGFR Mutation Detection Kit (AmoyDx). The same activating EGFR mutation was detected with the AmoyDx kit as in the primary tumor in 45.6% of the samples. T790M mutation was identified in 48.1% of the samples containing activating EGFR mutation. The detection rate of T790M mutation was not dependent on the DNA concentration of the plasma sample and there was no considerable improvement in mutation detection rate after a second, subsequent plasma sample. The concordance of EGFR activating mutation detection was 89% between the two methods, while this was 93% for T790M mutation detection. The AmoyDx kit, however showed an overall higher detection rate of T790M mutation compared to the cobas kit (p = 0.014). T790M mutation was detected at 29.8% of the patients if only plasma samples were available for analysis, while the detection rate was 70.2% in non-plasma samples. If the activating EGFR was detected in the plasma samples, the detection rate of T790M mutation was 42.4%. Although non-plasma samples provided a superior T790M mutation detection rate, we found that liquid biopsy can offer a valuable tool for T790M mutation detection, when a tissue biopsy is not available. Alternatively, a liquid biopsy can be used as a screening test, when re-biopsy should be considered in case of wild-type results.


Subject(s)
Carcinoma, Non-Small-Cell Lung , Circulating Tumor DNA , Lung Neoplasms , Humans , Carcinoma, Non-Small-Cell Lung/drug therapy , Carcinoma, Non-Small-Cell Lung/genetics , Carcinoma, Non-Small-Cell Lung/pathology , ErbB Receptors/genetics , Circulating Tumor DNA/genetics , Lung Neoplasms/drug therapy , Lung Neoplasms/genetics , Lung Neoplasms/pathology , Mutation/genetics , Protein Kinase Inhibitors/therapeutic use , Drug Resistance, Neoplasm/genetics
3.
PLoS One ; 17(5): e0268525, 2022.
Article in English | MEDLINE | ID: mdl-35617162

ABSTRACT

BACKGROUND: Takotsubo cardiomyopathy (TTC) is an important complication of subarachnoid hemorrhage (SAH), that may delay surgical or endovascular treatment and may influence patient outcome. This prospective follow-up study intended to collect data on the prevalence, severity, influencing factors and long-term outcome of TTC in patients suffering from non-traumatic SAH. METHODS: Consecutive patients admitted with the diagnosis of non-traumatic SAH were included. Intitial assessment consisted of cranial CT, Hunt-Hess, Fisher and WFNS scoring, 12-lead ECG, transthoracic echocardiography (TTE), transcranial duplex sonography and collecting laboratory parameters (CK, CK-MB, cardiac troponin T, NT-proBNP and urine metanephrine and normetanephrine). Diagnosis of TTC was based on modified Mayo criteria. TTC patients were dichotomized to mild and severe forms. Follow-up of TTE, Glasgow Outcome Scale assessment, Barthel's and Karnofsky scoring occurred on days 30 and 180. RESULTS: One hundred thirty six patients were included. The incidence of TTC in the entire cohort was 28.7%; of them, 20.6% and 8.1% were mild and severe, respectively. TTC was more frequent in females (30/39; 77%) than in males (9/39; 23%) and was more severe. The occurrence of TTC was related to mFisher scores and WFNS scores. Although the severity of TTC was related to mFisher score, Hunt-Hess score, WFNS score and GCS, multivariate analysis showed the strongest relationship with mFisher scores. Ejection fraction differences between groups were present on day 30, but disappeared by day 180, whereas wall motion score index was still higher in the severe TTC group at day 180. By the end of the follow-up period (180 days), 70 (74.5%) patients survived in the non-TTC, 22 (81.5%) in the mild TTC and 3 (27%) in the severe TTC group (n = 11) (p = 0.002). At day 180, GOS, Barthel, and Karnofsky outcome scores were higher in patients in the control (non-TTC) and the mild TTC groups than in the severe TTC group. CONCLUSIONS: Takotsubo cardiomyopathy is a frequent finding in patients with SAH, and severe TTC may be present in 8% of SAH cases. The severity of TTC may be an independent predictor of mortality and outcome at 6 months after disease onset. Therefore, a regular follow-up of ECG and TTE abnormalities is warranted in patients with subrachnoid hemorrhage for early detection of TTC. TRIAL REGISTRATION: The study was registered at the Clinical Trials Register under the registration number of NCT02659878 (date of registration: January 21, 2016).


Subject(s)
Subarachnoid Hemorrhage , Takotsubo Cardiomyopathy , Female , Follow-Up Studies , Glasgow Outcome Scale , Humans , Male , Prospective Studies , Subarachnoid Hemorrhage/surgery , Takotsubo Cardiomyopathy/complications , Takotsubo Cardiomyopathy/diagnosis , Takotsubo Cardiomyopathy/epidemiology
4.
PeerJ ; 8: e9586, 2020.
Article in English | MEDLINE | ID: mdl-32765969

ABSTRACT

Recycling biomass is indispensable these days not only because fossil energy sources are gradually depleted, but also because pollution of the environment, caused by the increasing use of energy, must be reduced. This article intends to overview the results of plant biomass processing methods that are currently in use. Our aim was also to review published methods that are not currently in use. It is intended to explore the possibilities of new methods and enzymes to be used in biomass recycling. The results of this overview are perplexing in almost every area. Advances have been made in the pre-treatment of biomass and in the diversity and applications of the enzymes utilized. Based on molecular modeling, very little progress has been made in the modification of existing enzymes for altered function and adaptation for the environmental conditions during the processing of biomass. There are hardly any publications in which molecular modeling techniques are used to improve enzyme function and to adapt enzymes to various environmental conditions. Our view is that using modern computational, biochemical, and biotechnological methods would enable the purposeful design of enzymes that are more efficient and suitable for biomass processing.

5.
Sci Rep ; 8(1): 5989, 2018 04 16.
Article in English | MEDLINE | ID: mdl-29662099

ABSTRACT

Studies have determined that the white-rot basidiomycete Phanerochaete chrysosporium is capable of biodegrading the atrazine herbicide with its broad-specificity enzymes, but the particular role of biocatalysts is still unclear. In the case of lignin peroxidase, a ligand access channel connected to the active heme cofactor provides access to the active site for potential small-sized substrates. Experimental results show that lignin peroxidase is unable to degrade atrazine, therefore, the primary goal was to determine whether there is any connection between the structural and dynamical properties of the enzyme and its incapability to degrade atrazine. The results of protein-ligand docking and molecular dynamics study correlate with relevant, published NMR and molecular dynamics data, and give the answer to the lack of atrazine degradation by lignin peroxidase which has already been established by numerous authors using experimental methods. Atrazine has no access to heme edge due to the electric charges of the delocalized s-triazine ring. The detected phenomenon suggests that the small size of the ligands only is not a sufficient condition to access the active site. Their physicochemical properties influence the structural behaviour of the channel.


Subject(s)
Atrazine/metabolism , Herbicides/metabolism , Peroxidases/metabolism , Phanerochaete/enzymology , Biodegradation, Environmental , Catalytic Domain , Heme/chemistry , Heme/metabolism , Molecular Docking Simulation , Peroxidases/chemistry , Phanerochaete/chemistry , Phanerochaete/metabolism , Protein Conformation
6.
Antonie Van Leeuwenhoek ; 110(5): 657-664, 2017 May.
Article in English | MEDLINE | ID: mdl-28160110

ABSTRACT

Two yeast strains representing a hitherto undescribed yeast species were isolated from olive oil and spoiled olive oil originating from Spain and Israel, respectively. Both strains are strong acetic acid producers, equipped with considerable tolerance to acetic acid. The cultures are not short-lived. Cellobiose is fermented as well as several other sugars. The sequences of their large subunit (LSU) rRNA gene D1/D2 domain are very divergent from the sequences available in the GenBank. They differ from the closest hit, Brettanomyces naardenensis by about 27%, mainly substitutions. Sequence analyses of the concatenated dataset from genes of the small subunit (SSU) rRNA, LSU rRNA and translation elongation factor-1α (EF-1α) placed the two strains as an early diverging member of the Brettanomyces/Dekkera clade with high bootstrap support. Sexual reproduction was not observed. The name Brettanomyces acidodurans sp. nov. (holotype: NCAIM Y.02178T; isotypes: CBS 14519T = NRRL Y-63865T = ZIM 2626T, MycoBank no.: MB 819608) is proposed for this highly divergent new yeast species.


Subject(s)
Acetic Acid/metabolism , Brettanomyces/classification , Brettanomyces/isolation & purification , Olive Oil , Brettanomyces/genetics , Brettanomyces/physiology , Carbohydrate Metabolism , Cluster Analysis , DNA, Fungal/chemistry , DNA, Fungal/genetics , DNA, Ribosomal/chemistry , DNA, Ribosomal/genetics , Israel , Microscopy , Multilocus Sequence Typing , Mycological Typing Techniques , Peptide Elongation Factor 1/genetics , Phylogeny , RNA, Ribosomal/genetics , RNA, Ribosomal, 18S/genetics , Spain
7.
Anatol J Cardiol ; 15(5): 363-70, 2015 May.
Article in English | MEDLINE | ID: mdl-25430402

ABSTRACT

OBJECTIVE: Wall motion abnormalities during acute ST-segment elevation myocardial infarction (STEMI) and the improvement after recanalization depend on the conditions of the coronary occlusion. METHODS: Fifty-seven patients with first-ever STEMI due to one-artery occlusion, treated with primary PCI, were evaluated. Area at risk and left ventricular wall motion abnormalities were localized with coronary angiography and echocardiography and then compared in relation to the time elapsed from the onset of symptoms at the time of infarction and at 3 months. Left ventricular diameters and ejection fractions were evaluated in relation to the ischemic time. RESULTS: Three hundred forty-one affected left ventricular segments were detected with angiography, while echocardiography showed 206 segments with motion abnormality. No correlation was found between the regional wall motion index in the area at risk and the time elapsed from the beginning of symptoms. However, the improvement in wall motion abnormalities at the follow-up was dependent on the ischemic time (r=-0.29, p<0.03). The early subgroup showed significant improvement in left ventricular ejection fraction at follow-up (p=0.03), whereas in the late subgroup, a significant increase in left ventricle diameters was observed. CONCLUSION: Our results first demonstrate in humans that in the early hours from the occlusion of the coronary artery, the extent and severity of the wall motion abnormalities inside the area at risk show large variability without relation to the elapsed time since the onset of symptoms. On the other hand, the results of follow-up echocardiography proved that the wall motion improvement was highly dependent on the ischemic time.


Subject(s)
Myocardial Infarction/physiopathology , Ventricular Dysfunction, Left/physiopathology , Angioplasty, Balloon, Coronary , Coronary Angiography , Echocardiography , Electrocardiography , Female , Humans , Male , Middle Aged , Myocardial Infarction/diagnostic imaging , Myocardial Infarction/therapy , Stroke Volume
8.
Antonie Van Leeuwenhoek ; 107(3): 645-54, 2015 Mar.
Article in English | MEDLINE | ID: mdl-25528339

ABSTRACT

Five yeast strains representing a hitherto undescribed yeast species were isolated from bee bread and honey in Hungary. They are obligate osmophilic, i.e. they are unable to grow in/on high water activity culture media. Following isogamous conjugation, they form 1-4 spheroid or subspheroid ascospores in persistent asci. The analysis of the sequences of their large subunit rRNA gene D1/D2 domain placed the new species in the Zygosaccharomyces clade. In terms of pairwise sequence similarity, Zygosaccharomyces gambellarensis is the most closely related species. Comparisons of D1/D2, internal transcribed spacer and translation elongation factor-1α (EF-1α) gene sequences of the five strains with that of the type strain of Z. gambellarensis revealed that they represent a new yeast species. The name Zygosaccharomyces favi sp. nov. (type strain: NCAIM Y.01994(T) = CBS 13653(T) = NRRL Y-63719(T) = ZIM 2551(T)) is proposed for this new yeast species, which based on phenotype can be distinguished from related Zygosaccharomyces species by its obligate osmophilic nature. Some intragenomic sequence variability, mainly indels, was detected among the ITS copies of the strains of the new species.


Subject(s)
Honey/microbiology , Propolis , Zygosaccharomyces/classification , Zygosaccharomyces/isolation & purification , Cluster Analysis , Culture Media/chemistry , DNA, Fungal/chemistry , DNA, Fungal/genetics , DNA, Ribosomal/chemistry , DNA, Ribosomal/genetics , DNA, Ribosomal Spacer/chemistry , DNA, Ribosomal Spacer/genetics , Hungary , Microscopy , Molecular Sequence Data , Mycological Typing Techniques , Osmotic Pressure , Peptide Elongation Factor 1/genetics , Phylogeny , RNA, Ribosomal/genetics , Sequence Analysis, DNA , Spores, Fungal/growth & development , Zygosaccharomyces/genetics , Zygosaccharomyces/growth & development
9.
Cell Calcium ; 57(1): 49-55, 2015 Jan.
Article in English | MEDLINE | ID: mdl-25533789

ABSTRACT

The most frequent form of hereditary blindness, autosomal dominant optic atrophy (ADOA), is caused by the mutation of the mitochondrial protein Opa1 and the ensuing degeneration of retinal ganglion cells. Previously we found that knockdown of OPA1 enhanced mitochondrial Ca(2+) uptake (Fülöp et al., 2011). Therefore we studied mitochondrial Ca(2+) metabolism in fibroblasts obtained from members of an ADOA family. Gene sequencing revealed heterozygosity for a splice site mutation (c. 984+1G>A) in intron 9 of the OPA1 gene. ADOA cells showed a higher rate of apoptosis than control cells and their mitochondria displayed increased fragmentation when forced to oxidative metabolism. The ophthalmological parameters critical fusion frequency and ganglion cell-inner plexiform layer thickness were inversely correlated to the evoked mitochondrial Ca(2+) signals. The present data indicate that enhanced mitochondrial Ca(2+) uptake is a pathogenetic factor in the progress of ADOA.


Subject(s)
Calcium/metabolism , Mitochondria/metabolism , Optic Atrophy, Autosomal Dominant/pathology , Adult , Apoptosis , Bradykinin/pharmacology , Calcium Signaling/drug effects , Cells, Cultured , Child , Evoked Potentials/drug effects , Female , Fibroblasts/cytology , Fibroblasts/metabolism , GTP Phosphohydrolases/genetics , Humans , Introns , Male , Microscopy, Confocal , Optic Atrophy, Autosomal Dominant/metabolism , Oxidative Stress , Pedigree , Polymorphism, Single Nucleotide , Severity of Illness Index
10.
Mol Cell Endocrinol ; 381(1-2): 70-9, 2013 Dec 05.
Article in English | MEDLINE | ID: mdl-23906536

ABSTRACT

We have previously described that silencing of the mitochondrial protein OPA1 enhances mitochondrial Ca(2+) signaling and aldosterone production in H295R adrenocortical cells. Since extramitochondrial OPA1 (emOPA1) was reported to facilitate cAMP-induced lipolysis, we hypothesized that emOPA1, via the enhanced hydrolysis of cholesterol esters, augments aldosterone production in H295R cells. A few OPA1 immunopositive spots were detected in ∼40% of the cells. In cell fractionation studies OPA1/COX IV (mitochondrial marker) ratio in the post-mitochondrial fractions was an order of magnitude higher than that in the mitochondrial fraction. The ratio of long to short OPA1 isoforms was lower in post-mitochondrial than in mitochondrial fractions. Knockdown of OPA1 failed to reduce db-cAMP-induced phosphorylation of hormone-sensitive lipase (HSL), Ca(2+) signaling and aldosterone secretion. In conclusion, OPA1 could be detected in the post-mitochondrial fractions, nevertheless, OPA1 did not interfere with the cAMP - PKA - HSL mediated activation of aldosterone secretion.


Subject(s)
Adrenal Cortex/physiology , GTP Phosphohydrolases/metabolism , Aldosterone/biosynthesis , Calcium Signaling , Cell Line , Cell Line, Tumor , Cyclic AMP/physiology , GTP Phosphohydrolases/genetics , Gene Knockdown Techniques , Humans , Mitochondria/metabolism , Phosphorylation , Protein Isoforms/genetics , Protein Isoforms/metabolism , Protein Processing, Post-Translational , Protein Transport , Sterol Esterase/metabolism
11.
Cell Calcium ; 52(1): 64-72, 2012 Jul.
Article in English | MEDLINE | ID: mdl-22364774

ABSTRACT

The mineralocorticoid hormone aldosterone is synthesized in the zona glomerulosa of the adrenal cortex. Glomerulosa cells respond to the physiological stimuli, elevated extracellular [K(+)] and angiotensin II, with an intracellular Ca(2+) signal. Cytosolic Ca(2+) facilitates the transport of the steroid-precursor cholesterol to mitochondria and, after a few hours, it also induces the transcription of aldosterone synthase. Therefore, the cytosolic Ca(2+) signal is regarded as the most important short and long-term mediator of aldosterone secretion. However, cytosolic Ca(2+) is also taken up by mitochondria and, in turn, the mitochondrial Ca(2+) response activates mitochondrial dehydrogenases resulting in stimulation of respiration and increase in reduced pyridine nucleotides. Since both cholesterol side-chain cleavage and all of the hydroxylation steps of steroid synthesis require NADPH as a cofactor, the importance of cytosolic Ca(2+) - mitochondrial Ca(2+) coupling and of appropriate NADPH supply in respect to hormone production can be assumed. However, the importance of the mitochondrial factors has been neglected so far. Here, after summarizing earlier findings we provide new results obtained through modifying mitochondrial Ca(2+) uptake by knocking down p38 MAPK or OPA1 and overexpressing S100G, supporting the notion that mitochondrial Ca(2+) and reduced pyridine nucleotides are facilitating factors for both basal and stimulated steroid production.


Subject(s)
Aldosterone/metabolism , Calcium/metabolism , Mitochondria/metabolism , NADP/metabolism , Aldosterone/biosynthesis , Angiotensin II/pharmacology , Animals , GTP Phosphohydrolases/antagonists & inhibitors , GTP Phosphohydrolases/genetics , GTP Phosphohydrolases/metabolism , Humans , Potassium/metabolism , RNA Interference , Signal Transduction/drug effects , Zona Glomerulosa/cytology , Zona Glomerulosa/drug effects , Zona Glomerulosa/metabolism , p38 Mitogen-Activated Protein Kinases/antagonists & inhibitors , p38 Mitogen-Activated Protein Kinases/genetics , p38 Mitogen-Activated Protein Kinases/metabolism
12.
PLoS One ; 6(9): e25199, 2011.
Article in English | MEDLINE | ID: mdl-21980395

ABSTRACT

The dynamin-related GTPase protein OPA1, localized in the intermembrane space and tethered to the inner membrane of mitochondria, participates in the fusion of these organelles. Its mutation is the most prevalent cause of Autosomal Dominant Optic Atrophy. OPA1 controls the diameter of the junctions between the boundary part of the inner membrane and the membrane of cristae and reduces the diffusibility of cytochrome c through these junctions. We postulated that if significant Ca²âº uptake into the matrix occurs from the lumen of the cristae, reduced expression of OPA1 would increase the access of Ca²âº to the transporters in the crista membrane and thus would enhance Ca²âº uptake. In intact H295R adrenocortical and HeLa cells cytosolic Ca²âº signals evoked with K⁺ and histamine, respectively, were transferred into the mitochondria. The rate and amplitude of mitochondrial [Ca²âº] rise (followed with confocal laser scanning microscopy and FRET measurements with fluorescent wide-field microscopy) were increased after knockdown of OPA1, as compared with cells transfected with control RNA or mitofusin1 siRNA. Ca²âº uptake was enhanced despite reduced mitochondrial membrane potential. In permeabilized cells the rate of Ca²âº uptake by depolarized mitochondria was also increased in OPA1-silenced cells. The participation of Na⁺/Ca²âº and Ca²âº/H⁺ antiporters in this transport process is indicated by pharmacological data. Altogether, our observations reveal the significance of OPA1 in the control of mitochondrial Ca²âº metabolism.


Subject(s)
Calcium Signaling/physiology , GTP Phosphohydrolases/metabolism , Mitochondria/metabolism , Antiporters/metabolism , Calcium/metabolism , Calcium Signaling/genetics , Cell Line , GTP Phosphohydrolases/genetics , HeLa Cells , Humans , Immunoblotting , Membrane Potential, Mitochondrial/genetics , Membrane Potential, Mitochondrial/physiology , Microscopy, Confocal , RNA, Small Interfering , Sodium-Calcium Exchanger/metabolism
13.
Cell Calcium ; 46(2): 122-9, 2009 Aug.
Article in English | MEDLINE | ID: mdl-19631981

ABSTRACT

Angiotensin II elicits cytosolic Ca2+ signal that is transferred into the mitochondria. Previously we found in H295R cells that this signal transfer is enhanced by both the inhibition of p38 MAPK and a novel isoform of PKC [G. Szanda, P. Koncz, A. Rajki, A. Spät, Participation of p38 MAPK and a novel-type protein kinase C in the control of mitochondrial Ca2+ uptake, Cell Calcium 43 (2008) 250-259]. Now we report that simultaneous activation of these protein kinases (by TNFalpha and PMA+an inhibitor of the conventional PKC isoforms, respectively) attenuates the transfer of cytosolic Ca2+ signal, elicited by depolarisation or store-operated Ca2+ influx, into the mitochondria. The Ca2+ uptake enhancing effect of the p38 MAPK inhibitor SB202190 is due to the inhibition of p38 MAPK and not to a direct mitochondrial action. Protein kinases reduce mitochondrial [Ca2+] by inhibiting the uptake mechanism. The threshold of mitochondrial Ca2+ uptake may depend on the activity of p38 MAPK. The silencing of protein kinase D (PKD) also results in enhanced transfer of Ca2+ signal from the cytosol into the mitochondria. Our data indicate that Ca2+ mobilising agonists, through the simultaneous activation of p38 MAPK, a novel PKC isoform and PKD, exert a negative feed-forward action on mitochondrial Ca2+ uptake, thus reducing the risk of Ca2+ overload.


Subject(s)
Calcium/metabolism , Cytosol/metabolism , Mitochondria/metabolism , Protein Kinase C/metabolism , p38 Mitogen-Activated Protein Kinases/metabolism , Angiotensin II/metabolism , Calcium Signaling/drug effects , Calcium Signaling/genetics , Cell Line , Cytosol/drug effects , Enzyme Activation/drug effects , Enzyme Activation/genetics , Feedback, Physiological , Humans , Imidazoles/pharmacology , Immunohistochemistry , Ion Transport/drug effects , Ion Transport/genetics , Microscopy, Confocal , Mitochondria/drug effects , Mitochondria/ultrastructure , Protein Kinase C/genetics , Pyridines/pharmacology , RNA Interference , RNA, Small Interfering , Tumor Necrosis Factor-alpha/metabolism
14.
Exp Dermatol ; 16(4): 302-10, 2007 Apr.
Article in English | MEDLINE | ID: mdl-17359336

ABSTRACT

Keratinocyte proliferation and differentiation is strongly influenced by mechanical forces. We investigated the effect of osmotic changes in the development of HaCaT cells in culture using intracellular calcium measurements, electrophysiological recordings and molecular biology techniques. The application of hypotonic stress (174 mOsmol/l) caused a sustained hyperpolarization of HaCaT cells from a resting potential of -27 +/- 4 to -51 +/- 9 mV. This change was partially reversible. The surface membrane channels involved in the hyperpolarization were identified as chloride channels due to the lack of response in the absence of the anion. Cells responded with an elevation of intracellular calcium concentration to hypotonic stress, which critically depended on external calcium. The presence of phorbol-12-myristate-13-acetate in the culture medium for 12 h augmented the subsequent response to hypotonic stress. A sudden switch from iso- to hypotonic solution increased cell proliferation and suppressed the production of involucrin, filaggrin and transglutaminase, markers of keratinocyte differentiation. It is concluded that sudden mechanical forces increase the proliferation of keratinocytes through alterations in their membrane potential and intracellular calcium concentration. These changes together with additional modifications in channel expression and intracellular signalling mechanisms could underlie the increased proliferation of keratinocytes in hyperproliferative skin diseases.


Subject(s)
Hypotonic Solutions/pharmacology , Keratinocytes/cytology , Keratinocytes/physiology , Water-Electrolyte Balance/physiology , Blood Proteins/pharmacology , Calcium/metabolism , Cell Differentiation/physiology , Cell Division/physiology , Cell Line, Transformed , Chlorides/pharmacology , Filaggrin Proteins , Humans , In Vitro Techniques , Membrane Potentials/drug effects , Membrane Potentials/physiology , Osmotic Pressure , Patch-Clamp Techniques , Stress, Mechanical , Water-Electrolyte Balance/drug effects
15.
Eur J Pharmacol ; 487(1-3): 29-36, 2004 Mar 08.
Article in English | MEDLINE | ID: mdl-15033373

ABSTRACT

Concentration-dependent (10-1000 microM) effects of terpenoid phenol derivatives were studied on L-type Ca(2+) current in isolated canine and human ventricular cardiomyocytes using the whole-cell configuration of patch clamp technique. Carvacrol, thymol and eugenol suppressed peak Ca(2+) current at +5 mV, having EC(50) values and Hill coefficients of 98+/-11, 158+/-7 and 187+/-15 microM and 1.42+/-0.05, 2.96+/-0.43 and 1.6+/-0.1, respectively, in canine myocytes. Zingerone displayed a weak effect (estimated EC(50): 2+/-0.37 mM, Hill coefficient: 0.73+/-0.07), while vanillin and guaiacol failed to substantially modify Ca(2+) current up to the concentration of 1 mM. In addition to tonic block, thymol and carvacrol, but not eugenol, evoked marked rate-dependent block at 2 Hz. Carvacrol and eugenol accelerated inactivation of Ca(2+) current and caused leftward shift in the voltage dependence of steady-state inactivation without altering activation kinetics. Carvacrol, but not eugenol, increased the time constant of recovery from inactivation. These effects of carvacrol and eugenol developed rapidly and were largely reversible. In myocytes isolated from undiseased human hearts, the effect of carvacrol was similar to that observed in canine cells. It is concluded that suppression of cardiac Ca(2+) currents by phenol derivatives is influenced by the substituent in the benzene ring, and the blocking effect of these drugs may involve interactions with the inactivation machinery of the channel.


Subject(s)
Calcium Channels/drug effects , Guaiacol/analogs & derivatives , Myocytes, Cardiac/metabolism , Phenols/pharmacology , Terpenes/pharmacology , Animals , Cell Separation , Cymenes , Dogs , Electrophysiology , Eugenol/pharmacology , Guaiacol/pharmacology , Heart Ventricles/cytology , Heart Ventricles/drug effects , Heart Ventricles/metabolism , Humans , In Vitro Techniques , Kinetics , Membrane Potentials/drug effects , Monoterpenes/pharmacology , Myocytes, Cardiac/drug effects , Patch-Clamp Techniques
16.
Curr Med Chem ; 11(1): 45-60, 2004 Jan.
Article in English | MEDLINE | ID: mdl-14754425

ABSTRACT

The goal of this paper is two fold. First, we attempt to review the reports available on the role of I(Ks) in myocardial repolarization. Based on theoretical considerations and experimental results, it seems reasonable to assume that I(Ks)blockade will lengthen the action potential. However, results obtained with I(Ks) blockers, like chromanol 293B or L-735,821, are conflicting, since from slight lengthening to marked prolongation of action potentials were equally obtained. Although these contradictory results were explained by interspecies or regional differences, the role of I(Ks) in repolarization is a matter of growing dispute. In the second part of this study, we simulated the performance of I(Ks) during cardiac action potentials. We compared the profile of the predicted current in three mathematical models in order to determine the relative role of the current in repolarization. We studied the effect of the cycle length, action potential duration and height of the plateau on the profile of I(Ks) in epicardiac, endocardiac and midmyocardiac ventricular action potentials. The results indicate that the height of the plateau is the most important parameter to control activation of I(Ks)in cardiac tissues, and accordingly, the interspecies and regional differences observed in the efficacy of I(Ks) blockers are likely due to the known differences in action potential morphology. We conclude also that I(Ks)blockade may have unpredictable effects on the length of the action potential in a diseased heart, questioning the possible therapeutic value of drugs blocking I(Ks).


Subject(s)
Anti-Arrhythmia Agents/pharmacology , Potassium Channel Blockers/pharmacology , Potassium Channels, Voltage-Gated , Potassium Channels/drug effects , Action Potentials/drug effects , Animals , Benzodiazepines/pharmacology , Chromans/pharmacology , Computer Simulation , Delayed Rectifier Potassium Channels , Endocardium/metabolism , Humans , Models, Theoretical , Myocardium/metabolism , Pericardium/metabolism , Potassium Channels/genetics , Potassium Channels/metabolism , Sulfonamides/pharmacology
17.
Antonie Van Leeuwenhoek ; 84(2): 147-59, 2003.
Article in English | MEDLINE | ID: mdl-14533718

ABSTRACT

Ten yeast strains representing six hitherto unknown methanol utilizing yeast species were isolated from tree exudate, bark and rotten wood samples. Following the sequencing of the D1/D2 region of their large (26S) subunit rDNA, the four ascosporogenous species were assigned to the genus Pichia, and the two anascosporogenous ones to the genus Candida. Although genetically clearly separated, three of the four new Pichia species are phenotypically very similar to P. pini, and they can be differentiated only by minor physiological and morphological characteristics. The description is given for the six new species (C. suzukii, C. hungarica, P. trehaloabstinens, P. pilisensis, P. dorogensis and P. zsoltii).


Subject(s)
Methanol/metabolism , Wood , Yeasts/isolation & purification , Yeasts/metabolism , Base Sequence , Candida/genetics , Candida/isolation & purification , Candida/metabolism , DNA, Fungal/genetics , DNA, Ribosomal/genetics , Molecular Sequence Data , Phenotype , Phylogeny , Pichia/genetics , Pichia/isolation & purification , Pichia/metabolism , Species Specificity , Spores, Fungal/metabolism , Trees/microbiology , Yeasts/genetics
18.
Antonie Van Leeuwenhoek ; 83(4): 327-32, 2003.
Article in English | MEDLINE | ID: mdl-12777068

ABSTRACT

Four strains of an unknown yeast species were isolated from rotten willow samples which were collected in Hungary. Although their phenotypic characteristics suggested that they were conspecific with Pichia pastoris, investigation of their small (18S) and large (26S) subunit rDNA revealed that they belonged to an undescribed yeast species. The description of the new yeast species, Pichia (Komagataella) pseudopastoris is given.


Subject(s)
Pichia/classification , Pichia/isolation & purification , Salix/microbiology , Biodegradation, Environmental , DNA, Fungal/analysis , DNA, Ribosomal Spacer/analysis , Hungary , Molecular Sequence Data , Mycological Typing Techniques , Phenotype , Pichia/genetics , Pichia/growth & development , RNA, Ribosomal, 18S/genetics , Restriction Mapping , Sequence Analysis, DNA
19.
Appl Environ Microbiol ; 69(4): 1944-52, 2003 Apr.
Article in English | MEDLINE | ID: mdl-12676668

ABSTRACT

Thermobifida fusca TM51, a thermophilic actinomycete isolated from composted horse manure, was found to produce a number of lignocellulose-degrading hydrolases, including endoglucanases, exoglucanases, endoxylanases, beta-xylosidases, endomannanases, and beta-mannosidases, when grown on cellulose or hemicellulose as carbon sources. beta-Mannosidases (EC 3.2.1.25), although contributing to the hydrolysis of hemicellulose fractions, such as galacto-mannans, constitute a lesser-known group of the lytic enzyme systems due to their low representation in the proteins secreted by hemicellulolytic microorganisms. An expression library of T. fusca, prepared in Streptomyces lividans TK24, was screened for beta-mannosidase activity to clone genes coding for mannosidases. One positive clone was identified, and a beta-mannosidase-encoding gene (manB) was isolated. Sequence analysis of the deduced amino acid sequence of the putative ManB protein revealed substantial similarity to known mannosidases in family 2 of the glycosyl hydrolase enzymes. The calculated molecular mass of the predicted protein was 94 kDa, with an estimated pI of 4.87. S. lividans was used as heterologous expression host for the putative beta-mannosidase gene of T. fusca. The purified gene product obtained from the culture filtrate of S. lividans was then subjected to more-detailed biochemical analysis. Temperature and pH optima of the recombinant enzyme were 53 degrees C and 7.17, respectively. Substrate specificity tests revealed that the enzyme exerts only beta-D-mannosidase activity. Its kinetic parameters, determined on para-nitrophenyl beta-D-mannopyranoside (pNP-betaM) substrate were as follows: K(m) = 180 micro M and V(max) = 5.96 micro mol min(-1) mg(-1); the inhibition constant for mannose was K(i) = 5.5 mM. Glucono-lacton had no effect on the enzyme activity. A moderate trans-glycosidase activity was also observed when the enzyme was incubated in the presence of pNP-alphaM and pNP-betaM; under these conditions mannosyl groups were transferred by the enzyme from pNP-betaM to pNP-alphaM resulting in the synthesis of small amounts (1 to 2%) of disaccharides.


Subject(s)
Actinomycetales/enzymology , Cloning, Molecular , Mannosidases/genetics , Mannosidases/metabolism , Streptomyces/enzymology , Actinomycetales/genetics , Amino Acid Sequence , Culture Media , Gene Expression Regulation, Bacterial , Kinetics , Mannosidases/chemistry , Mannosidases/isolation & purification , Molecular Sequence Data , Phylogeny , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Sequence Analysis, DNA , Streptomyces/genetics , Substrate Specificity , beta-Mannosidase
20.
Cardiovasc Res ; 58(1): 66-75, 2003 Apr 01.
Article in English | MEDLINE | ID: mdl-12667947

ABSTRACT

OBJECTIVES: The aim of the present study was to assess and compare the dynamics of L-type Ca(2+) current (I(Ca,L)) during physiologic action potential (AP) in canine ventricular cardiomyocytes of epicardial (EPI) and endocardial (ENDO) origin. METHODS: I(Ca,L) was recorded on cells derived from the two regions of the heart using both AP voltage clamp and conventional whole cell voltage clamp techniques. RESULTS: AP voltage clamp experiments revealed that the decay of I(Ca,L) is monotonic during endocardial AP, whereas the current is double-peaked (displaying a second rise) during epicardial AP. The amplitude of the first peak was significantly greater in ENDO (-4.6+/-0.8 pA/pF) than in EPI cells (-2.8+/-0.3 pA/pF). Application of epicardial APs as command pulses to endocardial cells yielded double-peaked I(Ca,L) profiles, and increased the net charge entry carried by I(Ca,L) during the AP from 0.187+/-0.059 to 0.262+/-0.056 pC/pF (n=5, P<0.05). No differences were observed in current densities and inactivation kinetics of I(Ca,L) between EPI and ENDO cells when studied under conventional voltage clamp conditions. Nisoldipine shortened action potentials and eliminated the dome of the epicardial AP. CONCLUSION: I(Ca,L) was shown to partially inactivate before and deactivate during phase-1 repolarization and reopening of these channels is responsible for the formation of the dome in canine EPI cells. The transmural differences in the profile of I(Ca,L) could be well explained with differences in AP configuration.


Subject(s)
Calcium Channels, L-Type/physiology , Endocardium/metabolism , Myocytes, Cardiac/metabolism , Pericardium/metabolism , Action Potentials/drug effects , Action Potentials/physiology , Animals , Calcium Channel Blockers/pharmacology , Calcium Channels, L-Type/drug effects , Dogs , Female , Male , Myocytes, Cardiac/drug effects , Nisoldipine/pharmacology , Patch-Clamp Techniques
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