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1.
Clin Transl Oncol ; 21(9): 1152-1158, 2019 Sep.
Article in English | MEDLINE | ID: mdl-30649710

ABSTRACT

OBJECTIVES: With the maturity of cryotherapy for prostate cancer, the complications after operation are also decreasing, which can improve the prognosis of patients. However, erectile dysfunction (ED) is still one of the main complications after cryotherapy. Therefore, we performed a meta-analysis to evaluate the incidence of erectile dysfunction in patients after cryotherapy. MATERIALS AND METHODS: A comprehensive literature search was performed in August 2018. PUBMED and EMBASE databases were searched to collect studies reporting the incidence rate of ED after cryotherapy from 2002 to 2018. Two reviewers independently screened the literatures, extracted data and assessed the risk of bias of included studies. Pooled ratio and its 95% confidence intervals (95% CIs) were performed by Stata 12.1. RESULTS: Of the 157 articles identified on August 1st 2018, 23 studies which reported ED after cold ablative therapy were identified, however, only 12 used validated outcome measures and met inclusion criteria. A total of 12 studies were included in this meta-analysis. Overall, the results of this meta-analysis showed that the pooled incidence rate of ED was 0.27 (95% CI 0.26-0.28) which means that the incidence rate of ED after cryotherapy for prostate cancer was not high, but we still found that there are great heterogeneity between the 12 articles. By subgroup analysis, we found a statistically significant incidence rate of ED in primarily localized PCa which was 0.49 (95% CI 0.30-0.68), which is clearly lower than the incidence of recurrent prostate cancer after failed primary radiotherapy 0.61 (95% CI 0.43-0.79). CONCLUSION: ED is one of the major complications after cryotherapy for PCa. Furthermore, subgroup analysis revealed a higher incidence rate in PCa undergoing radiotherapy. Significantly, with the development of cryotherapy technology, the incidence of ED after cryotherapy for prostate cancer is decreasing. While we still need further researches to advance knowledge in this field.


Subject(s)
Cryotherapy/adverse effects , Erectile Dysfunction/epidemiology , Prostatic Neoplasms/therapy , Erectile Dysfunction/etiology , Humans , Incidence , Male , Prognosis
2.
Genet Mol Res ; 16(1)2017 Mar 16.
Article in English | MEDLINE | ID: mdl-28362986

ABSTRACT

Coilia ectenes is a commercially important fishery species in China. C. ectenes taihuensis is an endemic and dominant species found in Taihu Lake of China. When compared with C. ectenes, C. ectenes taihuensis lacks anadromous behavior, and can independently grow and reproduce in Taihu Lake. In this study, the mitochondrial DNA control region (D-loop) sequences were employed to investigate the genetic diversity and population structure of C. ectenes taihuensis. Sixty-eight individuals collected from 4 localities in Taihu Lake were examined. Results indicated that in the 887-bp D-loop region, seventy-seven (8.68%) sites were variant, contributing to 53 distinct haplotypes. Although the population haplotype diversity (Hd = 0.971 to 1.000) was generally high, the nucleotide diversity (π = 0.616 to 0.731%) was relatively low among the 4 populations. Additionally, the genetic distances ranged from 0.62 to 0.74% within the populations and from 0.67 to 0.74% between the populations. The neighbor-joining tree indicated that a distinct distribution of phylogenetic structure existed among haplotypes. Analysis of molecular variance and FST statistics suggested that a divergence existed among populations in 4 localities, indicating that gene communication might have occurred among those populations. Furthermore, neutral tests and analysis of mismatch distribution reflected that C. ectenes taihuensis might have undergone a population expansion during the evolution process. Our study showed the population genetic diversity and structure of C. ectenes taihuensis. Results from this study might be helpful in the development and protection of fishery resource within the localities in Taihu Lake in future.


Subject(s)
DNA, Mitochondrial/genetics , Fishes/genetics , Polymorphism, Genetic , Animals , China , Evolution, Molecular , Genetics, Population , Haplotypes , Lakes , Phylogeny
3.
Genet Mol Res ; 14(4): 14181-8, 2015 Nov 13.
Article in English | MEDLINE | ID: mdl-26600475

ABSTRACT

RNA-Seq technology has been widely applied to transcriptomics, genomics, molecular marker development, and functional gene studies. In the genome, microsatellites are simple sequence repeats (SSR) with a high degree of polymorphism that are used as DNA markers in many molecular genetic studies. Using traditional methods such as magnetic bead enrichment, only a few microsatellite markers have been isolated. Coilia nasus is an anadromous, small-to-moderately sized fish species that is famous as an important fishery resource. Here, we have identified a large number of microsatellites from the fish brains by using Illumina sequencing. About 20 million Illumina reads were assembled into 148,845 unigenes. A total of 13,038 SSR motifs were identified via analysis of 3,958,293,117 (3.96 Gb) nucleotides to produce a comprehensive transcript dataset for the C. nasus brain, including mono-, di-, tri-, tetra-, and penta-repeat motifs. The most abundant type of repeat motif was di-nucleotide (42.97%), followed by mono-nucleotide (38.86%), tri-nucleotide (16.21%), tetra-nucleotide (1.83%), and penta-nucleotide (0.05%) repeat units, which is similar to the results obtained in studies in other species. These data provide a base of sequence information to improve molecular-assisted markers to study C. nasus genetic diversity.


Subject(s)
Fishes/genetics , Sequence Analysis, RNA/methods , Animals , Expressed Sequence Tags , Gene Expression Profiling/methods , Genetic Markers/genetics , Genetic Variation , Genome , Microsatellite Repeats , Molecular Sequence Annotation , Polymorphism, Genetic , Transcriptome
4.
Genet Mol Res ; 14(2): 4896-902, 2015 May 11.
Article in English | MEDLINE | ID: mdl-25966264

ABSTRACT

The aim of this study was to investigate the clinical effect of western medicine therapy assisted by Ginkgo biloba tablets (GBT) in patients with vascular cognitive impairment with no dementia (VCIND). Eighty patients with VCIND were randomly divided into two groups: the conventional treatment group (control group) and the combined treatment group. The conventional treatment group was provided with anti-platelet aggregation conventional treatment. In this group, 75 mg aspirin was given three times a day for 3 months, whereas the combined treatment group was given 19.2 mg GBT three times a day for 3 months along with conventional anti-platelet aggregation treatment. Montreal cognitive assessment (MoCA) and transcranial Doppler ultrasonography were used to observe changes in cognitive ability and cerebral blood flow in patients with VCIND before and after treatment in the two groups. After 3 months of treatment, the MoCA scores of execution, attention, abstraction, delayed memory, and orientation were significantly increased in the combined treatment group compared with those before treatment and those in the control group after treatment. In addition, the blood flow velocity of the anterior cerebral artery was significantly increased in the combined treatment group. GBT can improve the therapeutic efficacy, cognitive ability, and cerebral blood flow supply of patients with VCIND.


Subject(s)
Aspirin/administration & dosage , Cognition Disorders/drug therapy , Drugs, Chinese Herbal/administration & dosage , Plant Extracts/administration & dosage , Vascular Diseases/drug therapy , Aged , Cerebellum/blood supply , Cerebellum/drug effects , Cognition Disorders/pathology , Dementia/physiopathology , Drugs, Chinese Herbal/chemistry , Female , Ginkgo biloba/chemistry , Humans , Male , Medicine, Chinese Traditional , Middle Aged , Plant Extracts/chemistry , Ultrasonography, Doppler, Transcranial , Vascular Diseases/pathology
5.
Genet Mol Res ; 13(4): 9777-86, 2014 Nov 27.
Article in English | MEDLINE | ID: mdl-25501187

ABSTRACT

We screened and assessed published cotton simple sequence repeat (SSR) primers to establish a set of core SSR markers suitable for cotton major cultivars in China and analyzed genetic diversity based on the core marker set. Using a stepwise screening strategy, 12 leading cultivars for preliminary screening and 96 cultivars for rescreening were evaluated. A total of 184 polymorphic SSR markers were initially screened from 3299 candidates, and a core set of 52 SSR markers with wide genome coverage (2 markers per chromosome) was obtained. Among 96 major cultivars, 273 amplification genotypes were generated using the core marker set. Polymorphism information content values ranged from 0.28-0.83, with an average value of 0.56. The core SSR marker set detected on denaturing polyacrylamide gel electrophoresis indicated that the band genotype was either a single or double band on conventional cultivars, while most were double bands (65.4%). Among 56 hybrids, the average heterozygosis rate was 35.8%, ranging from 7.1-55.4%. Eighteen of 96 cultivars had distinct band genotypes. The genetic diversity analyzed using the of NTSYS-pc V2.10 software indicated that the Yangtze River valley cotton region had the highest polymorphic level, followed by Xinjiang and then the Yellow River valley. The genetic basis of conventional cultivars was narrower than that of hybrids. The core marker set can be used for fingerprint construction, variety identification, and purity tests of major cotton cultivars in China.


Subject(s)
Chimera/genetics , Gossypium/genetics , Microsatellite Repeats , Polymorphism, Genetic , Alleles , Breeding , Chromosomes, Plant/chemistry , Genotype , Genotyping Techniques , Gossypium/classification , Heterozygote , Phylogeny
6.
Braz J Med Biol Res ; 47(5): 394-7, 2014 May.
Article in English | MEDLINE | ID: mdl-24838642

ABSTRACT

Our objective was to investigate the distributions of six single nucleotide polymorphisms (SNPs) MS4A2 E237G, MS4A2 C-109T, ADRB2 R16G, IL4RA I75V, IL4 C-590T, and IL13 C1923T in Mauritian Indian and Chinese Han children with asthma. This case-control association study enrolled 382 unrelated Mauritian Indian children, 193 with asthma and 189 healthy controls, and 384 unrelated Chinese Han children, 192 with asthma and 192 healthy controls. The SNP loci were genotyped using polymerase chain reaction (PCR)-restriction fragment length polymorphism for the Chinese Han samples and TaqMan real-time quantitative PCR for the Mauritian Indian samples. In the Mauritian Indian children, there was a significant difference in the distribution of IL13 C1923T between the asthma and control groups (P=0.033). The frequency of IL13 C1923T T/T in the Mauritian Indian asthma group was significantly higher than in the control group [odds ratio (OR)=2.119, 95% confidence interval=1.048-4.285]. The Chinese Han children with asthma had significantly higher frequencies of MS4A2 C-109T T/T (OR=1.961, P=0.001) and ADRB2 R16G A/A (OR=2.575, P=0.000) than the control group. The IL13 C1923T locus predisposed to asthma in Mauritian Indian children, which represents an ethnic difference from the Chinese Han population. The MS4A2 C-109T T/T and ADRB2 R16G A/A genotypes were associated with asthma in the Chinese Han children.


Subject(s)
Asian People/genetics , Asthma/genetics , Genetic Predisposition to Disease/ethnology , Polymorphism, Single Nucleotide/genetics , Adolescent , Asthma/epidemiology , Asthma/ethnology , Case-Control Studies , Causality , Child , Child, Preschool , China/epidemiology , China/ethnology , Female , Genetic Association Studies , Genetic Loci , Genetic Predisposition to Disease/epidemiology , Genotype , Humans , Interleukin-13/genetics , Interleukin-4/genetics , Interleukin-4 Receptor alpha Subunit/genetics , Male , Mauritius/epidemiology , Mauritius/ethnology , Polymorphism, Restriction Fragment Length , Real-Time Polymerase Chain Reaction , Receptors, Adrenergic, beta-2/genetics , Receptors, IgE/genetics , Young Adult
7.
Rev. bras. pesqui. méd. biol ; Braz. j. med. biol. res;47(5): 394-397, 02/05/2014. tab
Article in English | LILACS | ID: lil-709433

ABSTRACT

Our objective was to investigate the distributions of six single nucleotide polymorphisms (SNPs) MS4A2 E237G, MS4A2 C-109T, ADRB2 R16G, IL4RA I75V, IL4 C-590T, and IL13 C1923T in Mauritian Indian and Chinese Han children with asthma. This case-control association study enrolled 382 unrelated Mauritian Indian children, 193 with asthma and 189 healthy controls, and 384 unrelated Chinese Han children, 192 with asthma and 192 healthy controls. The SNP loci were genotyped using polymerase chain reaction (PCR)-restriction fragment length polymorphism for the Chinese Han samples and TaqMan real-time quantitative PCR for the Mauritian Indian samples. In the Mauritian Indian children, there was a significant difference in the distribution of IL13 C1923T between the asthma and control groups (P=0.033). The frequency of IL13 C1923T T/T in the Mauritian Indian asthma group was significantly higher than in the control group [odds ratio (OR)=2.119, 95% confidence interval=1.048-4.285]. The Chinese Han children with asthma had significantly higher frequencies of MS4A2 C-109T T/T (OR=1.961, P=0.001) and ADRB2 R16G A/A (OR=2.575, P=0.000) than the control group. The IL13 C1923T locus predisposed to asthma in Mauritian Indian children, which represents an ethnic difference from the Chinese Han population. The MS4A2 C-109T T/T and ADRB2 R16G A/A genotypes were associated with asthma in the Chinese Han children.


Subject(s)
Adolescent , Child , Child, Preschool , Female , Humans , Male , Young Adult , Asian People/genetics , Asthma/genetics , Genetic Predisposition to Disease/ethnology , Polymorphism, Single Nucleotide/genetics , Asthma/epidemiology , Asthma/ethnology , Case-Control Studies , Causality , China/epidemiology , China/ethnology , Genetic Association Studies , Genetic Loci , Genotype , Genetic Predisposition to Disease/epidemiology , /genetics , /genetics , /genetics , Mauritius/epidemiology , Mauritius/ethnology , Polymorphism, Restriction Fragment Length , Real-Time Polymerase Chain Reaction , /genetics , Receptors, IgE/genetics
8.
Genet Mol Res ; 13(1): 1-10, 2014 Jan 03.
Article in English | MEDLINE | ID: mdl-24421150

ABSTRACT

We investigated the effects of type 1 diabetes mellitus (T1DM) on endothelial progenitor cells (EPCs) at the molecular level and assessed the therapeutic potential of folic acid (FA) in DM. We downloaded the gene expression profile of the EPCs from T1DM patients before and after treatment with FA and from healthy controls. We identified the differentially expressed genes (DEGs) in the EPCs from T1DM patients before and after a four-week period of FA treatment and compared them with those obtained from the healthy subjects by using limma package in R language. Then, functional annotation of the DEGs was performed using the online tool Database for Annotation, Visualization and Integrated Discovery (DAVID) based on the Kyoto Encyclopedia of Genes and Genomes database. The expression of 696 genes was altered in the EPCs from T1DM patients compared to those from the healthy controls. These genes were mainly involved in the pathways associated with immune response. FA can normalize majority of the altered gene expression profiles of EPCs from T1DM patients to resemble those of healthy subjects, albeit with some side effects. FA can be a potential therapeutic agent for the treatment of T1DM. However, focused efforts are required to ensure that the dose of FA falls within the permissible pharmacological range.


Subject(s)
Computational Biology , Diabetes Mellitus, Type 1/metabolism , Endothelial Cells/drug effects , Folic Acid/pharmacology , Gene Regulatory Networks , Stem Cells/drug effects , Case-Control Studies , Diabetes Mellitus, Type 1/drug therapy , Diabetes Mellitus, Type 1/pathology , Endothelial Cells/metabolism , Folic Acid/therapeutic use , Gene Expression Profiling , Humans , RNA, Messenger/genetics , RNA, Messenger/metabolism , Stem Cells/metabolism
9.
Genet Mol Res ; 12(3): 3103-9, 2013 Apr 26.
Article in English | MEDLINE | ID: mdl-23661401

ABSTRACT

The scaly-sided merganser (Mergus squamatus), found in temperate East Asia, has been reduced to a very small population. Central and southern China are its main wintering habitat. However, populations have declined greatly since the 1980s due to habitat loss and degradation, and poaching. To meet the urgent need for up-to-date conservation information, we examined RAPD DNA markers from 156 specimens in 6 populations in Jiangxi Province. We found that genetic diversity (based on individual similarities) is in fact low; molecular variance between populations ranged from 0.137 to 0.347. Genetic similarity ranged from 0.683 to 0.866. In conclusion, the geographical pattern of genetic diversity supports the long-term refugial status of the scaly-sided merganser in central-southern China; strong conservation measures should be taken to maintain the merganser in this region.


Subject(s)
Anseriformes/genetics , Genetic Markers/genetics , Genetic Variation , Random Amplified Polymorphic DNA Technique , Animals , China , Ecosystem , Endangered Species , Genetics, Population
10.
Genet Mol Res ; 10(4): 3963-75, 2011 Oct 25.
Article in English | MEDLINE | ID: mdl-22033909

ABSTRACT

The freshwater crayfish Cherax quadricarinatus, originally from Australia, is an invasive species that is also widely used in aquaculture. DEAD-box helicase family genes are found throughout evolution and encode RNA-binding proteins. The human DDX5 (p68) is important for normal cell growth, differentiation and proliferation. We identified a C. quadricarinatus homolog of DDX5 (Cq-DDX5); the temporal expression of Cq-DDX5 mRNA transcripts was measured during early ontogenesis, during spermatogenesis, during testes development, and during the annual cycle. The Cq-DDX5 cDNA comprises 2258 nucleotides, with an open reading frame of 1569 bp, encoding 522 amino acid residues. The deduced amino acid sequence of Cq-DDX5 has a 53 to 90% similarity to DDX5 of other eukaryotic species. mRNA transcripts of Cq-DDX5 were detected in all tissues, with high levels in the gonads. The DDX5 expression was highest in the nauplii stage, during early ontogenesis and during testes development. In adult testes, transcripts appeared at significantly higher levels in the prespawning and spawning phase than in the post-spawning or regressed phase. Eyestalk ablation resulted in upregulation of Cq-DDX5 in adult male gonads in a time-dependent manner, with a peak at about 12 days. We conclude that the Cq-DDX5 gene plays an important role in early ontogenesis and spermatogenesis, with a crucial reproductive function in germ cell differentiation in these invertebrates.


Subject(s)
Astacoidea/enzymology , Fish Proteins/genetics , Amino Acid Sequence , Animals , Astacoidea/genetics , Base Sequence , Cell Differentiation , DEAD-box RNA Helicases/genetics , DEAD-box RNA Helicases/metabolism , DNA, Complementary/chemistry , Fish Proteins/metabolism , Gonads/metabolism , Male , Molecular Sequence Data , Phylogeny , RNA, Messenger/metabolism , Sequence Alignment , Spermatogenesis , Testis
11.
Article in English | MEDLINE | ID: mdl-17990170

ABSTRACT

The aim of the present study was to examine Cr removal from tannery sludge by bioleaching method using indigenous sulfur-oxidizing bacteria with special emphasis on the influence of bioleaching process on sludge settleability. Chemical leaching with sulfuric acid was designed as the control. The results showed that the inoculation of sulfur-oxidizing bacteria and the addition of elemental sulfur were effective in removing Cr from tannery sludge. After 144 hours of bioleaching, 98% of Cr could be leached. Although it took only 8 hours to reduce the sludge pH from 7.8 to about 2.0 by chemical leaching as compared to 144 hours for bioleaching treatment, chemical leaching removed only 91% of the total Cr. Regardless of bioleaching and chemical leaching treatments, sludge settleability improved considerably with a decrease in sludge pH. Bioleaching treatment performed better than chemical leaching in terms of the percentage of settled sludge and the effluent suspended solids (ESS) content in sludge supernatant. Nevertheless, further work should be carried out to investigate the precise mechanisms leading to such enhanced sludge settleability during sludge bioleaching process.


Subject(s)
Bacteria/metabolism , Chromium/metabolism , Sewage/chemistry , Sewage/microbiology , Hydrogen-Ion Concentration , Oxidation-Reduction , Sulfur/metabolism
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