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1.
Eur Respir J ; 63(2)2024 Feb.
Article in English | MEDLINE | ID: mdl-38212077

ABSTRACT

BACKGROUND: Fibroblast-to-myofibroblast conversion is a major driver of tissue remodelling in organ fibrosis. Distinct lineages of fibroblasts support homeostatic tissue niche functions, yet their specific activation states and phenotypic trajectories during injury and repair have remained unclear. METHODS: We combined spatial transcriptomics, multiplexed immunostainings, longitudinal single-cell RNA-sequencing and genetic lineage tracing to study fibroblast fates during mouse lung regeneration. Our findings were validated in idiopathic pulmonary fibrosis patient tissues in situ as well as in cell differentiation and invasion assays using patient lung fibroblasts. Cell differentiation and invasion assays established a function of SFRP1 in regulating human lung fibroblast invasion in response to transforming growth factor (TGF)ß1. MEASUREMENTS AND MAIN RESULTS: We discovered a transitional fibroblast state characterised by high Sfrp1 expression, derived from both Tcf21-Cre lineage positive and negative cells. Sfrp1 + cells appeared early after injury in peribronchiolar, adventitial and alveolar locations and preceded the emergence of myofibroblasts. We identified lineage-specific paracrine signals and inferred converging transcriptional trajectories towards Sfrp1 + transitional fibroblasts and Cthrc1 + myofibroblasts. TGFß1 downregulated SFRP1 in noninvasive transitional cells and induced their switch to an invasive CTHRC1+ myofibroblast identity. Finally, using loss-of-function studies we showed that SFRP1 modulates TGFß1-induced fibroblast invasion and RHOA pathway activity. CONCLUSIONS: Our study reveals the convergence of spatially and transcriptionally distinct fibroblast lineages into transcriptionally uniform myofibroblasts and identifies SFRP1 as a modulator of TGFß1-driven fibroblast phenotypes in fibrogenesis. These findings are relevant in the context of therapeutic interventions that aim at limiting or reversing fibroblast foci formation.


Subject(s)
Idiopathic Pulmonary Fibrosis , Myofibroblasts , Mice , Animals , Humans , Myofibroblasts/metabolism , Fibroblasts/metabolism , Lung/metabolism , Idiopathic Pulmonary Fibrosis/metabolism , Cell Differentiation , Transforming Growth Factor beta1/metabolism , Extracellular Matrix Proteins/metabolism , Membrane Proteins/genetics , Membrane Proteins/metabolism
2.
EMBO J ; 42(8): e110597, 2023 04 17.
Article in English | MEDLINE | ID: mdl-36912165

ABSTRACT

The immunoproteasome is a specialized type of proteasome involved in MHC class I antigen presentation, antiviral adaptive immunity, autoimmunity, and is also part of a broader response to stress. Whether the immunoproteasome is regulated by DNA stress, however, is not known. We here demonstrate that mitochondrial DNA stress upregulates the immunoproteasome and MHC class I antigen presentation pathway via cGAS/STING/type I interferon signaling resulting in cell autonomous activation of CD8+ T cells. The cGAS/STING-induced adaptive immune response is also observed in response to genomic DNA and is conserved in epithelial and mesenchymal cells of mice and men. In patients with idiopathic pulmonary fibrosis, chronic activation of the cGAS/STING-induced adaptive immune response in aberrant lung epithelial cells concurs with CD8+ T-cell activation in diseased lungs. Genetic depletion of the immunoproteasome and specific immunoproteasome inhibitors counteract DNA stress induced cytotoxic CD8+ T-cell activation. Our data thus unravel cytoplasmic DNA sensing via the cGAS/STING pathway as an activator of the immunoproteasome and CD8+ T cells. This represents a novel potential pathomechanism for pulmonary fibrosis that opens new therapeutic perspectives.


Subject(s)
Adaptive Immunity , CD8-Positive T-Lymphocytes , DNA, Mitochondrial , Histocompatibility Antigens Class I/genetics , Immunity, Innate , Nucleotidyltransferases/genetics , Nucleotidyltransferases/metabolism , Membrane Proteins/metabolism
3.
Front Immunol ; 13: 901194, 2022.
Article in English | MEDLINE | ID: mdl-35734174

ABSTRACT

The lung epithelial barrier serves as a guardian towards environmental insults and responds to allergen encounter with a cascade of immune reactions that can possibly lead to inflammation. Whether the environmental sensor aryl hydrocarbon receptor (AhR) together with its downstream targets cytochrome P450 (CYP1) family members contribute to the regulation of allergic airway inflammation remains unexplored. By employing knockout mice for AhR and for single CYP1 family members, we found that AhR-/- and CYP1B1-/- but not CYP1A1-/- or CYP1A2-/- animals display enhanced allergic airway inflammation compared to WT. Expression analysis, immunofluorescence staining of murine and human lung sections and bone marrow chimeras suggest an important role of CYP1B1 in non-hematopoietic lung epithelial cells to prevent exacerbation of allergic airway inflammation. Transcriptional analysis of murine and human lung epithelial cells indicates a functional link of AhR to barrier protection/inflammatory mediator signaling upon allergen challenge. In contrast, CYP1B1 deficiency leads to enhanced expression and activity of CYP1A1 in lung epithelial cells and to an increased availability of the AhR ligand kynurenic acid following allergen challenge. Thus, differential CYP1 family member expression and signaling via the AhR in epithelial cells represents an immunoregulatory layer protecting the lung from exacerbation of allergic airway inflammation.


Subject(s)
Cytochrome P-450 CYP1A1 , Lung , Receptors, Aryl Hydrocarbon , Allergens , Animals , Cytochrome P-450 Enzyme System , Humans , Inflammation , Lung/metabolism , Lung/physiopathology , Mice , Mice, Knockout , Receptors, Aryl Hydrocarbon/genetics , Receptors, Aryl Hydrocarbon/metabolism
4.
Cells ; 11(8)2022 04 14.
Article in English | MEDLINE | ID: mdl-35456020

ABSTRACT

Antibodies are central effectors of the adaptive immune response, widespread used therapeutics, but also potentially disease-causing biomolecules. Antibody folding catalysts in the plasma cell are incompletely defined. Idiopathic pulmonary fibrosis (IPF) is a fatal chronic lung disease with increasingly recognized autoimmune features. We found elevated expression of FK506-binding protein 11 (FKBP11) in IPF lungs where FKBP11 specifically localized to antibody-producing plasma cells. Suggesting a general role in plasma cells, plasma cell-specific FKBP11 expression was equally observed in lymphatic tissues, and in vitro B cell to plasma cell differentiation was accompanied by induction of FKBP11 expression. Recombinant human FKBP11 was able to refold IgG antibody in vitro and inhibited by FK506, strongly supporting a function as antibody peptidyl-prolyl cis-trans isomerase. Induction of ER stress in cell lines demonstrated induction of FKBP11 in the context of the unfolded protein response in an X-box-binding protein 1 (XBP1)-dependent manner. While deficiency of FKBP11 increased susceptibility to ER stress-mediated cell death in an alveolar epithelial cell line, FKBP11 knockdown in an antibody-producing hybridoma cell line neither induced cell death nor decreased expression or secretion of IgG antibody. Similarly, antibody secretion by the same hybridoma cell line was not affected by knockdown of the established antibody peptidyl-prolyl isomerase cyclophilin B. The results are consistent with FKBP11 as a novel XBP1-regulated antibody peptidyl-prolyl cis-trans isomerase and indicate significant redundancy in the ER-resident folding machinery of antibody-producing hybridoma cells.


Subject(s)
Idiopathic Pulmonary Fibrosis , Tacrolimus Binding Proteins , Humans , Immunoglobulin G , Peptidylprolyl Isomerase/metabolism , Plasma Cells/metabolism , Tacrolimus Binding Proteins/metabolism
5.
Cancer Res ; 81(23): 5862-5875, 2021 12 01.
Article in English | MEDLINE | ID: mdl-34666994

ABSTRACT

Asymptomatic anthracosis is the accumulation of black carbon particles in adult human lungs. It is a common occurrence, but the pathophysiologic significance of anthracosis is debatable. Using in situ high mass resolution matrix-assisted laser desorption/ionization (MALDI) fourier-transform ion cyclotron resonance (FT-ICR) mass spectrometry imaging analysis, we discovered noxious carbon-bound exogenous compounds, such as polycyclic aromatic hydrocarbons (PAH), tobacco-specific nitrosamines, or aromatic amines, in a series of 330 patients with lung cancer in highly variable and unique patterns. The characteristic nature of carbon-bound exogenous compounds had a strong association with patient outcome, tumor progression, the tumor immune microenvironment, programmed death-ligand 1 (PD-L1) expression, and DNA damage. Spatial correlation network analyses revealed substantial differences in the metabolome of tumor cells compared with tumor stroma depending on carbon-bound exogenous compounds. Overall, the bioactive pool of exogenous compounds is associated with several changes in lung cancer pathophysiology and correlates with patient outcome. Given the high prevalence of anthracosis in the lungs of adult humans, future work should investigate the role of carbon-bound exogenous compounds in lung carcinogenesis and lung cancer therapy. SIGNIFICANCE: This study identifies a bioactive pool of carbon-bound exogenous compounds in patient tissues associated with several tumor biological features, contributing to an improved understanding of drivers of lung cancer pathophysiology.


Subject(s)
Carcinoma, Squamous Cell/pathology , Idiopathic Pulmonary Fibrosis/pathology , Lung Neoplasms/pathology , Metabolome , Nitrosamines/adverse effects , Polycyclic Aromatic Hydrocarbons/adverse effects , Tumor Microenvironment , Carcinogenesis , Carcinoma, Squamous Cell/chemically induced , Carcinoma, Squamous Cell/metabolism , Humans , Idiopathic Pulmonary Fibrosis/chemically induced , Idiopathic Pulmonary Fibrosis/metabolism , Lung Neoplasms/chemically induced , Lung Neoplasms/metabolism , Mass Spectrometry , Retrospective Studies , Tobacco Use
6.
Nat Commun ; 12(1): 4515, 2021 07 26.
Article in English | MEDLINE | ID: mdl-34312385

ABSTRACT

The in vivo phenotypic profile of T cells reactive to severe acute respiratory syndrome (SARS)-CoV-2 antigens remains poorly understood. Conventional methods to detect antigen-reactive T cells require in vitro antigenic re-stimulation or highly individualized peptide-human leukocyte antigen (pHLA) multimers. Here, we use single-cell RNA sequencing to identify and profile SARS-CoV-2-reactive T cells from Coronavirus Disease 2019 (COVID-19) patients. To do so, we induce transcriptional shifts by antigenic stimulation in vitro and take advantage of natural T cell receptor (TCR) sequences of clonally expanded T cells as barcodes for 'reverse phenotyping'. This allows identification of SARS-CoV-2-reactive TCRs and reveals phenotypic effects introduced by antigen-specific stimulation. We characterize transcriptional signatures of currently and previously activated SARS-CoV-2-reactive T cells, and show correspondence with phenotypes of T cells from the respiratory tract of patients with severe disease in the presence or absence of virus in independent cohorts. Reverse phenotyping is a powerful tool to provide an integrated insight into cellular states of SARS-CoV-2-reactive T cells across tissues and activation states.


Subject(s)
COVID-19/immunology , Gene Expression Profiling/methods , Sequence Analysis, RNA/methods , Single-Cell Analysis/methods , T-Lymphocytes/metabolism , Aged , Aged, 80 and over , CD4-Positive T-Lymphocytes/metabolism , CD4-Positive T-Lymphocytes/virology , COVID-19/epidemiology , COVID-19/virology , Cells, Cultured , Cohort Studies , Female , Humans , Male , Middle Aged , Pandemics , Receptors, Antigen, T-Cell/genetics , Receptors, Antigen, T-Cell/immunology , Receptors, Antigen, T-Cell/metabolism , SARS-CoV-2/physiology , T-Lymphocytes/virology
8.
Eur Respir J ; 55(2)2020 02.
Article in English | MEDLINE | ID: mdl-31744836

ABSTRACT

Circulating immune cell populations have been shown to contribute to interstitial lung disease (ILD). In this study, we analysed circulating and lung resident monocyte populations, and assessed their phenotype and recruitment from the blood to the lung in ILD. Flow cytometry analysis of blood samples for quantifying circulating monocytes was performed in 105 subjects: 83 with ILD (n=36, n=28 and n=19 for nonspecific interstitial pneumonia, hypersensitivity pneumonitis and connective-tissue disease-associated ILD, respectively), as well as 22 controls. Monocyte localisation and abundance were assessed using immunofluorescence and flow cytometry of lung tissue. Monocyte populations were cultured either alone or with endothelial cells to assess fractalkine-dependent transmigration pattern. We show that circulating classical monocytes (CM) were increased in ILD compared with controls, while nonclassical monocytes (NCM) were decreased. CM abundance correlated inversely with lung function, while NCM abundance correlated positively. Both CCL2 and CX3CL1 concentrations were increased in plasma and lungs of ILD patients. Fractalkine co-localised with ciliated bronchial epithelial cells, thereby creating a chemoattractant gradient towards the lung. Fractalkine enhanced endothelial transmigration of NCM in ILD samples only. Immunofluorescence, as well as flow cytometry, showed an increased presence of NCM in fibrotic niches in ILD lungs. Moreover, NCM in the ILD lungs expressed increased CX3CR1, M2-like and phagocytic markers. Taken together, our data support that in ILD, fractalkine drives the migration of CX3CR1+ NCM to the lungs, thereby perpetuating the local fibrotic process.


Subject(s)
Chemokine CX3CL1 , Lung Diseases, Interstitial , CX3C Chemokine Receptor 1 , Endothelial Cells , Flow Cytometry , Humans , Monocytes
9.
Sci Rep ; 9(1): 15224, 2019 10 23.
Article in English | MEDLINE | ID: mdl-31645612

ABSTRACT

The proteasome is essential for the selective degradation of most cellular proteins and is fine-tuned according to cellular needs. Proteasome activators serve as building blocks to adjust protein turnover in cell growth and differentiation. Understanding the cellular function of proteasome activation in more detail offers a new strategy for therapeutic targeting of proteasomal protein breakdown in disease. The role of the proteasome activator PA200 in cell function and its regulation in disease is unknown. In this study, we investigated the function of PA200 in myofibroblast differentiation and fibrotic tissue remodeling. PA200 was upregulated in hyperplastic basal cells and myofibroblasts of fibrotic lungs from patients with idiopathic pulmonary fibrosis. Increased expression of PA200 and enhanced formation of PA200-proteasome complexes was also evident in experimental fibrosis of the lung and kidney in vivo and in activated primary human myofibroblasts of the lung in vitro. Transient silencing and overexpression revealed that PA200 functions as a negative regulator of myofibroblast differentiation of human but not mouse cells. Our data thus suggest an unexpected and important role for PA200 in adjusting myofibroblast activation in response to pro-fibrotic stimuli, which fails in idiopathic pulmonary fibrosis.


Subject(s)
Myofibroblasts/metabolism , Nuclear Proteins/metabolism , Proteasome Endopeptidase Complex/metabolism , Adult , Animals , Cell Differentiation , Cells, Cultured , Female , Fibrosis , Humans , Idiopathic Pulmonary Fibrosis/metabolism , Idiopathic Pulmonary Fibrosis/pathology , Kidney/pathology , Lung/pathology , Male , Mice , Mice, Inbred C57BL , Middle Aged , Myofibroblasts/cytology , Myofibroblasts/pathology , Signal Transduction , Transforming Growth Factor beta/metabolism
10.
EBioMedicine ; 43: 562-575, 2019 May.
Article in English | MEDLINE | ID: mdl-31060902

ABSTRACT

BACKGROUND: Chronic Obstructive Pulmonary Disease (COPD) is the third leading cause of death worldwide with no curative therapy. A non-canonical Notch ligand, DNER, has been recently identified in GWAS to associate with COPD severity, but its function and contribution to COPD is unknown. METHODS: DNER localisation was assessed in lung tissue from healthy and COPD patients, and cigarette smoke (CS) exposed mice. Microarray analysis was performed on WT and DNER deficient M1 and M2 bone marrow-derived macrophages (BMDM), and gene set enrichment undertaken. WT and DNER deficient mice were exposed to CS or filtered air for 3 day and 2 months to assess IFNγ-expressing macrophages and emphysema development. Notch and NFKB active subunits were quantified in WT and DNER deficient LPS-treated and untreated BMDM. FINDINGS: Immunofluorescence staining revealed DNER localised to macrophages in lung tissue from COPD patients and mice. Human and murine macrophages showed enhanced DNER expression in response to inflammation. Interestingly, pro-inflammatory DNER deficient BMDMs exhibited impaired NICD1/NFKB dependent IFNγ signalling and reduced nuclear NICD1/NFKB translocation. Furthermore, decreased IFNγ production and Notch1 activation in recruited macrophages from CS exposed DNER deficient mice were observed, protecting against emphysema and lung dysfunction. INTERPRETATION: DNER is a novel protein induced in COPD patients and 6 months CS-exposed mice that regulates IFNγ secretion via non-canonical Notch in pro-inflammatory recruited macrophages. These results provide a new pathway involved in COPD immunity that could contribute to the discovery of innovative therapeutic targets. FUNDING: This work was supported from the Helmholtz Alliance 'Aging and Metabolic Programming, AMPro'.


Subject(s)
Interferon-gamma/biosynthesis , Macrophages/metabolism , Nerve Tissue Proteins/metabolism , Pulmonary Disease, Chronic Obstructive/metabolism , Receptors, Cell Surface/metabolism , Receptors, Notch/metabolism , Animals , Biomarkers , Disease Models, Animal , Fluorescent Antibody Technique , Gene Expression , Humans , Immunophenotyping , Macrophage Activation/genetics , Macrophage Activation/immunology , Macrophages/immunology , Mice , Mice, Knockout , Models, Biological , Monocytes/immunology , Monocytes/metabolism , Nerve Tissue Proteins/genetics , Pulmonary Disease, Chronic Obstructive/etiology , Receptors, Cell Surface/genetics , Signal Transduction
11.
Nat Commun ; 10(1): 963, 2019 02 27.
Article in English | MEDLINE | ID: mdl-30814501

ABSTRACT

Aging promotes lung function decline and susceptibility to chronic lung diseases, which are the third leading cause of death worldwide. Here, we use single cell transcriptomics and mass spectrometry-based proteomics to quantify changes in cellular activity states across 30 cell types and chart the lung proteome of young and old mice. We show that aging leads to increased transcriptional noise, indicating deregulated epigenetic control. We observe cell type-specific effects of aging, uncovering increased cholesterol biosynthesis in type-2 pneumocytes and lipofibroblasts and altered relative frequency of airway epithelial cells as hallmarks of lung aging. Proteomic profiling reveals extracellular matrix remodeling in old mice, including increased collagen IV and XVI and decreased Fraser syndrome complex proteins and collagen XIV. Computational integration of the aging proteome with the single cell transcriptomes predicts the cellular source of regulated proteins and creates an unbiased reference map of the aging lung.


Subject(s)
Aging/genetics , Aging/metabolism , Lung/metabolism , Aging/pathology , Animals , Cholesterol/biosynthesis , Collagen/metabolism , Epithelial Cells/metabolism , Extracellular Matrix/metabolism , Gene Expression Profiling , Lung/cytology , Mice , Mice, Inbred C57BL , Proteome/metabolism , Proteomics , Single-Cell Analysis
12.
Am J Respir Cell Mol Biol ; 60(6): 659-666, 2019 06.
Article in English | MEDLINE | ID: mdl-30562054

ABSTRACT

Altered expression of syndecan-2 (SDC2), a heparan sulfate proteoglycan, has been associated with diverse types of human cancers. However, the mechanisms by which SDC2 may contribute to the pathobiology of lung adenocarcinoma have not been previously explored. SDC2 levels were measured in human lung adenocarcinoma samples and lung cancer tissue microarrays using immunohistochemistry and real-time PCR. To understand the role of SDC2 in vitro, SDC2 was silenced or overexpressed in A549 lung adenocarcinoma cells. The invasive capacity of cells was assessed using Matrigel invasion assays and measuring matrix metalloproteinase (MMP) 9 expression. Finally, we assessed tumor growth and metastasis of SDC2-deficient A549 cells in a xenograft tumor model. SDC2 expression was upregulated in malignant epithelial cells and macrophages obtained from human lung adenocarcinomas. Silencing of SDC2 decreased MMP9 expression and attenuated the invasive capacity of A549 lung adenocarcinoma cells. The inhibitory effect of SDC2 silencing on MMP9 expression and cell invasion was reversed by overexpression of MMP9 and syntenin-1. SDC2 silencing attenuated NF-κB p65 subunit nuclear translocation and its binding to the MMP9 promoter, which were restored by overexpression of syntenin-1. SDC2 silencing in vivo reduced tumor mass volume and metastasis. These findings suggest that SDC2 plays an important role in the invasive properties of lung adenocarcinoma cells and that its effects are mediated by syntenin-1. Thus, inhibiting SDC2 expression or activity could serve as a potential therapeutic target to treat lung adenocarcinoma.


Subject(s)
Adenocarcinoma of Lung/pathology , Lung Neoplasms/pathology , Syndecan-2/metabolism , A549 Cells , Adenocarcinoma of Lung/genetics , Animals , Cell Nucleus/metabolism , Cell Proliferation , Gene Expression Regulation, Neoplastic , Gene Silencing , Humans , Lung Neoplasms/genetics , Matrix Metalloproteinase 9/metabolism , Mice, SCID , Neoplasm Invasiveness , Syntenins/metabolism , Transcription Factor RelA/metabolism , Up-Regulation/genetics
13.
Eur Respir J ; 52(3)2018 09.
Article in English | MEDLINE | ID: mdl-30072508

ABSTRACT

Idiopathic pulmonary fibrosis (IPF) is a fatal condition that reduces life expectancy and shows a limited response to available therapies. Pirfenidone has been approved for treatment of IPF, but little is known about the distinct metabolic changes that occur in the lung upon pirfenidone administration.Here, we performed a proof-of-concept study using high-resolution quantitative matrix-assisted laser desorption/ionisation Fourier-transform ion cyclotron resonance mass spectrometry imaging (MALDI-FTICR-MSI) to simultaneously detect, visualise and quantify in situ endogenous and exogenous metabolites in lungs of mice subjected to experimental fibrosis and human patients with IPF, and to assess the effect of pirfenidone treatment on metabolite levels.Metabolic pathway analysis and endogenous metabolite quantification revealed that pirfenidone treatment restores redox imbalance and glycolysis in IPF tissues, and downregulates ascorbate and aldarate metabolism, thereby likely contributing to in situ modulation of collagen processing. As such, we detected specific alterations in metabolite pathways in fibrosis and, importantly, metabolic recalibration following pirfenidone treatment.Together, these results highlight the suitability of high-resolution MALDI-FTICR-MSI for deciphering the therapeutic effects of pirfenidone and provide a preliminary analysis of the metabolic changes that occur during pirfenidone treatment in vivo These data may therefore contribute to improvement of currently available therapies for IPF.


Subject(s)
Anti-Inflammatory Agents, Non-Steroidal/metabolism , Anti-Inflammatory Agents, Non-Steroidal/pharmacology , Idiopathic Pulmonary Fibrosis/drug therapy , Pyridones/metabolism , Pyridones/pharmacology , Animals , Female , Humans , Idiopathic Pulmonary Fibrosis/metabolism , Lung/metabolism , Lung/pathology , Metabolic Networks and Pathways , Mice , Mice, Inbred C57BL , Proof of Concept Study , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Tissue Distribution
14.
Eur Respir Rev ; 26(145)2017 Sep 30.
Article in English | MEDLINE | ID: mdl-28954764

ABSTRACT

Fibrotic lung diseases involve subject-environment interactions, together with dysregulated homeostatic processes, impaired DNA repair and distorted immune functions. Systems medicine-based approaches are used to analyse diseases in a holistic manner, by integrating systems biology platforms along with clinical parameters, for the purpose of understanding disease origin, progression, exacerbation and remission.Interstitial lung diseases (ILDs) refer to a heterogeneous group of complex fibrotic diseases. The increase of systems medicine-based approaches in the understanding of ILDs provides exceptional advantages by improving diagnostics, unravelling phenotypical differences, and stratifying patient populations by predictable outcomes and personalised treatments. This review discusses the state-of-the-art contributions of systems medicine-based approaches in ILDs over the past 5 years.


Subject(s)
Lung Diseases, Interstitial , Lung , Systems Biology/methods , Animals , Biomarkers/blood , Disease Progression , Gene-Environment Interaction , Genetic Predisposition to Disease , Genomics , Host-Pathogen Interactions , Humans , Lung/metabolism , Lung/pathology , Lung/physiopathology , Lung Diseases, Interstitial/genetics , Lung Diseases, Interstitial/metabolism , Lung Diseases, Interstitial/pathology , Lung Diseases, Interstitial/physiopathology , Metabolomics , Microbiota , Phenotype , Risk Factors
15.
Adv Sci (Weinh) ; 4(2): 1600238, 2017 02.
Article in English | MEDLINE | ID: mdl-28251048

ABSTRACT

Red blood cells are "shaken" with a holographic optical tweezer array. The flow generated around cells due to the periodic optical forcing is measured with an optically trapped "detector" particle located in the cell vicinity. A signal-processing model that describes the cell's physical properties as an analog filter illustrates how cells can be distinguished from each other.

16.
Eur Respir J ; 48(4): 1171-1183, 2016 10.
Article in English | MEDLINE | ID: mdl-27587556

ABSTRACT

Idiopathic pulmonary fibrosis (IPF) is a fibroproliferative disease with irreversible lung function loss and poor survival. Myeloid-derived suppressor cells (MDSC) are associated with poor prognosis in cancer, facilitating immune evasion. The abundance and function of MDSC in IPF is currently unknown.Fluorescence-activated cell sorting was performed in 170 patients (IPF: n=69; non-IPF interstitial lung disease (ILD): n=56; chronic obstructive pulmonary disease (COPD): n=23; healthy controls: n=22) to quantify blood MDSC and lymphocyte subtypes. MDSC abundance was correlated with lung function, MDSC localisation was performed by immunofluorescence. Peripheral blood mononuclear cell (PBMC) mRNA levels were analysed by qRT-PCR.We detected increased MDSC in IPF and non-IPF ILD compared with controls (30.99±15.61% versus 18.96±8.17%, p≤0.01). Circulating MDSC inversely correlated with maximum vital capacity (r= -0.48, p≤0.0001) in IPF, but not in COPD or non-IPF ILD. MDSC suppressed autologous T-cells. The mRNA levels of co-stimulatory T-cell signals were significantly downregulated in IPF PBMC. Importantly, CD33+CD11b+ cells, suggestive of MDSC, were detected in fibrotic niches of IPF lungs.We identified increased MDSC in IPF and non-IPF ILD, suggesting that elevated MDSC may cause a blunted immune response. MDSC inversely correlate with lung function only in IPF, identifying them as potent biomarkers for disease progression. Controlling expansion and accumulation of MDSC, or blocking their T-cell suppression, represents a promising therapy in IPF.


Subject(s)
Idiopathic Pulmonary Fibrosis/immunology , Leukocytes, Mononuclear/immunology , Myeloid-Derived Suppressor Cells/cytology , Aged , Biomarkers/blood , Case-Control Studies , Cell Separation , Coculture Techniques , Disease Progression , Female , Flow Cytometry , Humans , Idiopathic Pulmonary Fibrosis/physiopathology , Immune System , Lung/pathology , Lung Diseases, Interstitial/blood , Male , Middle Aged , Prognosis , Prospective Studies , Pulmonary Disease, Chronic Obstructive/blood , RNA, Messenger/metabolism
17.
Sci Rep ; 6: 29952, 2016 07 20.
Article in English | MEDLINE | ID: mdl-27435875

ABSTRACT

Aberrant antioxidant activity and excessive deposition of extracellular matrix (ECM) are hallmarks of interstitial lung diseases (ILD). It is known that oxidative stress alters the ECM, but extracellular antioxidant defence mechanisms in ILD are incompletely understood. Here, we extracted abundance and detergent solubility of extracellular antioxidant enzymes from a proteomic dataset of bleomycin-induced lung fibrosis in mice and assessed regulation and distribution of glutathione peroxidase 3 (GPX3) in murine and human lung fibrosis. Superoxide dismutase 3 (Sod3), Gpx3, and Gpx activity were increased in mouse BALF during bleomycin-induced lung fibrosis. In lung tissue homogenates, Gpx3, but not Sod3, was upregulated and detergent solubility profiling indicated that Gpx3 associated with ECM proteins. Immunofluorescence analysis showed that Gpx3 was expressed by bronchial epithelial cells and interstitial fibroblasts and localized to the basement membrane and interstitial ECM in lung tissue. As to human ILD samples, BALF of some patients contained high levels of GPX3, and GPX3 was upregulated in lung homogenates from IPF patients. GPX3 expression in primary human bronchial epithelial cells and lung fibroblasts was downregulated by TNF-α, but more variably regulated by TGF-ß1 and menadione. In conclusion, the antioxidant enzyme GPX3 localizes to lung ECM and is variably upregulated in ILD.


Subject(s)
Epithelial Cells/enzymology , Extracellular Matrix/enzymology , Glutathione Peroxidase/metabolism , Lung Diseases, Interstitial/enzymology , Aged , Animals , Antioxidants/metabolism , Bleomycin , Bronchi/pathology , Bronchoalveolar Lavage Fluid , Demography , Disease Models, Animal , Down-Regulation/drug effects , Female , Fibroblasts/drug effects , Fibroblasts/metabolism , Humans , Male , Mice, Inbred C57BL , Middle Aged , Oxidative Stress/drug effects , Pulmonary Fibrosis/enzymology , Transforming Growth Factor beta1/metabolism , Tumor Necrosis Factor-alpha/metabolism , Up-Regulation , Vitamin K 3/pharmacology
18.
Am J Respir Cell Mol Biol ; 55(3): 309-22, 2016 09.
Article in English | MEDLINE | ID: mdl-27149613

ABSTRACT

Pulmonary fibrosis, particularly idiopathic pulmonary fibrosis, represents a chronic and progressive disease with high mortality and limited therapeutic options. Excessive deposition of extracellular matrix proteins results in fibrotic remodeling, alveolar destruction, and irreversible loss of lung function. Both innate and adaptive immune mechanisms contribute to fibrogenesis at several cellular and noncellular levels. Here, we summarize and discuss the role of immune cells (T cells, neutrophils, macrophages, and fibrocytes) and soluble mediators (cytokines and chemokines) involved in pulmonary fibrosis, pointing toward novel immune-based therapeutic strategies in the field.


Subject(s)
Pulmonary Fibrosis/immunology , Animals , Cytokines/metabolism , Humans , Leukocytes/immunology , Models, Biological , Pulmonary Fibrosis/therapy
19.
Am J Physiol Lung Cell Mol Physiol ; 310(10): L919-27, 2016 05 15.
Article in English | MEDLINE | ID: mdl-26993522

ABSTRACT

To date, phenotyping and disease course prediction in idiopathic pulmonary fibrosis (IPF) primarily relies on lung function measures. Blood biomarkers were recently proposed for diagnostic and outcome prediction in IPF, yet their correlation with lung function and histology remains unclear. Here, we comprehensively assessed biomarkers in liquid biopsies and correlated their abundance with lung function and histology during the onset, progression, and resolution of lung fibrosis, with the aim to more precisely evaluate disease progression in the preclinical model of bleomycin-induced pulmonary fibrosis in vivo. Importantly, the strongest correlation of lung function with histological extent of fibrosis was observed at day 14, whereas lung function was unchanged at days 28 and 56, even when histological assessment showed marked fibrotic lesions. Although matrix metalloproteinase-7 (MMP-7), MMP-9, and PAI-1 were significantly elevated in broncheoalveolar lavage of fibrotic mice, only soluble ICAM-1 (sICAM-1) was elevated in the peripheral blood of fibrotic mice and was strongly correlated with the extent of fibrosis. Importantly, tissue-bound ICAM-1 was also elevated in lung homogenates, with prominent staining in hyperplastic type II alveolar epithelial and endothelial cells. In summary, we show that lung function decline is not a prerequisite for histologically evident fibrosis, particularly during the onset or resolution thereof. Plasma levels of sICAM-1 strongly correlate with the extent of lung fibrosis, and may thus be considered for the assessment of intraindividual therapeutic studies in preclinical studies of pulmonary fibrosis.


Subject(s)
Pulmonary Fibrosis/blood , Alveolar Epithelial Cells/metabolism , Animals , Biomarkers/blood , Cells, Cultured , Female , Intercellular Adhesion Molecule-1/blood , Lung/metabolism , Lung/pathology , Mice, Inbred C57BL , Phenotype , Pulmonary Fibrosis/pathology
20.
Edumecentro ; 8(1): 84-95, ene.-mar. 2016. ilus
Article in Spanish | LILACS | ID: lil-770932

ABSTRACT

Fundamento: la prevención del tabaquismo debe involucrar a maestros, padres, organizaciones sociales, profesionales de la salud, e incluso, estudiantes de las ciencias médicas. En el accionar de estos últimos las actividades extensionistas juegan un papel protagónico. Objetivo: describir una estrategia educativa para la prevención del tabaquismo en niños y adolescentes desarrollada por estudiantes de Medicina y Estomatología, como parte de la labor extensionista de la universidad médica con la comunidad educativa. Métodos: se realizó una investigación participativa en la Ciudad Escolar "Abel Santamaría" de Santa Clara, entre octubre 2014 y marzo de 2015. Se utilizaron métodos del nivel teórico: histórico-lógico, análisis-síntesis e inducción-deducción y del empírico: los grupos de discusión y la observación. Resultados: el diagnóstico realizado permitió constatar que un porciento considerable de adolescentes fuma, iniciaron su mal hábito en los primeros años de la carrera, con mayor prevalencia en los alumnos de los años terminales y hay poca percepción de riesgo entre ellos. Los profesores reconocen la pobre realización de actividades dirigidas a la prevención del hábito de fumar en las instituciones escolares a que pertenecen y la necesidad de involucrar a la familia en las acciones educativas. Se elaboró una estrategia que tuvo en cuenta el nivel y la edad de los alumnos a que iba dirigida y la realización de múltiples técnicas participativas para motivar a los estudiantes sobre el tema. Conclusiones: la estrategia elaborada fue valorada por criterios de especialistas como positiva dado el nivel de pertinencia para resolver las carencias detectadas.


Background: nicotinism prevention should involve teachers, parents, social organizations, health professionals, and even, students of the medical sciences. Extracurricular activities play a protagonist role in the student's ´performance. Objective: to describe an educational strategy for nicotinism prevention in children and adolescents developed by students of Medicine and Odontology, as a part of the medical university extracurricular work with the educational community. Methods: it was carried out a participative investigation in "Abel Santamaría" School City of Santa Clara, from October 2014 to March 2015. Methods of the theoretical level were used: historical-logical, analysis-synthesis and induction-deduction and of the empiric one: the group discussion and the observation. Results: the diagnosis showed that a considerable percent of adolescents smoke, they began this bad habit in the first years of the career, prevailing in high standards in the students of the terminal years and there is little perception of risk among them. The professors recognize the poor carrying out of activities directed to the prevention of the smoking habit at school and the necessity to involve the family in educational actions. A strategy was elaborated where it was taken into account the school level and the age of the students involved in it and the carrying out of multiple participative techniques to motivate the students on the topic. Conclusions: it was valued by specialists' criteria as positive according to its pertinence to solve the detected deficiencies.


Subject(s)
Students, Medical , Smoking , Education, Medical , Health Services
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