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1.
Heredity (Edinb) ; 116(5): 434-46, 2016 May.
Article in English | MEDLINE | ID: mdl-26883184

ABSTRACT

Bulbophyllum occultum, an epiphytic orchid mainly distributed in the rainforests of (north)eastern Madagascar and La Réunion, represents an interesting model case for testing the effects of anthropogenic vs historical (e.g., climate induced) habitat isolation and long-distance colonization on the genetic structure of plant species with disjunct distributions in the Madagascan region. To this aim, we surveyed amplified fragment length polymorphisms (AFLPs) across 13 populations in Madagascar and nine in La Réunion (206 individuals in total). We found overall high levels of population subdivision (Φ(PT)=0.387) and low within-population diversity (H(E), range: 0.026-0.124), indicating non-equilibrium conditions in a mainly selfing species. There was no impact of recent deforestation (Madagascar) or habitat disturbance (La Réunion) detectable on AFLP diversity. K-means clustering and BARRIER analyses identified multiple gene pools and several genetic breaks, both within and among islands. Inter-island levels of population genetic diversity and subdivision were similar, whereby inter-individual divergence in flower colour explained a significant part of gene pool divergence in La Réunion. Our results suggest that (i) B. occultum persisted across multiple isolated ('refugial') regions along the eastern rainforest corridor of Madagascar over recent climatic cycles and (ii) populations in La Réunion arose from either single or few independent introductions from Madagascar. High selfing rates and sufficient time for genetic drift likely promoted unexpectedly high population genetic and phenotypic (flower colour) differentiation in La Réunion. Overall, this study highlights a strong imprint of history on the genetic structure of a low-gene-dispersing epiphytic orchid from the Madagascan region.


Subject(s)
Amplified Fragment Length Polymorphism Analysis , Ecosystem , Genetic Variation , Genetics, Population , Orchidaceae/genetics , Color , DNA, Plant/genetics , Flowers/physiology , Genetic Drift , Islands , Madagascar , Reunion , Spatial Analysis
3.
J Am Coll Cardiol ; 34(3): 739-47, 1999 Sep.
Article in English | MEDLINE | ID: mdl-10483955

ABSTRACT

OBJECTIVES: We examined the diagnostic performance of serum myoglobin, creatine-kinase-MB (CK-MB) and cardiac troponin-I (cTnI) for predicting the infarct-related artery (IRA) patency in patients receiving TNK-tissue plasminogen activator (TNK-tPA) therapy for acute myocardial infarction (AMI) in the Thrombolysis in Myocardial Infarction (TIMI) 10B trial. BACKGROUND: A reliable noninvasive serum marker of IRA patency is desired to permit early identification of patients with a patent IRA after thrombolysis. METHODS: We measured myoglobin, CK-MB and cTnI concentrations in sera obtained just before thrombolysis (T0) and 60 min later (T60) in 442 patients given TNK-tPA and who underwent coronary angiography at 60 min. RESULTS: Angiography at 60 min showed a patent IRA (TIMI flow grade 2, 3) in 344 and occluded IRA (TIMI flow grade 0, 1) in 98 patients. The median serum T60 concentration, the ratio of the T60 and T0 serum concentration (60-min ratio) and the slope of increase over 60 min for each serum marker were significantly higher in patients with patent arteries compared with patients with occluded arteries. The area under the receiver-operating characteristic (ROC) curve for diagnosis of occlusion was 0.71, 0.70 and 0.71 for the 60-min ratio of myoglobin, cTnI and CKMB, respectively. The 60-min ratios of > or =4.0 for myoglobin, > or =3.3 for CK-MB and > or =2.0 for cTnI yielded a probability of patency of 90%, 88% and 87%, respectively. CONCLUSIONS: The diagnostic performance of serum myoglobin, CK-MB and cardiac troponin-I (cTnI) 60-min ratios was similar. The probability of a patent IRA was very high (90%) in patients with 60-min myoglobin ratio > or =4.0, and early invasive interventions to establish IRA patency may not be necessary in this group. Serum marker determinations at baseline and 60-min after thrombolysis may permit rapid triage of patients receiving thrombolytic therapy by ruling out IRA occlusion.


Subject(s)
Clinical Enzyme Tests , Creatine Kinase/blood , Myocardial Infarction/diagnosis , Myoglobin/blood , Thrombolytic Therapy , Tissue Plasminogen Activator/therapeutic use , Troponin I/blood , Vascular Patency/drug effects , Aged , Biomarkers/blood , Clinical Enzyme Tests/methods , Clinical Enzyme Tests/statistics & numerical data , Female , Humans , Isoenzymes , Male , Middle Aged , Myocardial Infarction/drug therapy , Myocardial Infarction/physiopathology , Prognosis , ROC Curve , Thrombolytic Therapy/methods , Thrombolytic Therapy/statistics & numerical data , Time Factors
4.
Am Heart J ; 134(4): 622-30, 1997 Oct.
Article in English | MEDLINE | ID: mdl-9351728

ABSTRACT

BACKGROUND: The availability of a reliable, noninvasive serum marker of reperfusion may permit early identification of patients with occlusion after thrombolysis who might benefit from further interventions. METHODS: We measured myoglobin, creatine kinase MB (CK-MB), and cardiac troponin-I (cTnI) concentrations in sera obtained just before thrombolysis (T0) and 60 minutes later (T60) in 30 patients given TNK-tPA for acute myocardial infarction as part of the Thrombolysis in Myocardial Infarction (TIMI) 10A trial. RESULTS: Angiography at T60 showed reperfusion (TIMI flow grade 2 to 3; n = 19) or occlusion (TIMI flow grade 0 to 1; n = 8). The median serum T60 concentration, the ratio of the T60 and T0 serum concentration, and the slope of increase over a 60-minute period for each serum marker were significantly higher in patients with patent arteries compared with patients with occluded arteries. The areas under the receiver operator characteristics curve for diagnosis of occlusion were 0.96, 0.91, and 0.87 for the T60 concentration of myoglobin, CK-MB and cTnI, respectively. Although the T60 levels of <469 ng/ml for myoglobin, <11.5 ng/ml for CK-MB, and < 1.1 ng/ml for cTnI identified all patients with occlusion, the specificity of myoglobin (94%) was higher than that of CK-MB (61%) and cTnI (67%). Similar results were obtained for the 60-minute ratios and 60-minute slopes for each marker, with indexes for myoglobin having the highest specificity. CONCLUSIONS: In this pilot study, noninvasive diagnosis of occlusion 60 minutes after thrombolysis was achieved with a high degree of sensitivity and specificity with the myoglobin, CK-MB, and cTnI concentrations measured at that time point. These preliminary findings may permit a new strategy for assessment of the success of reperfusion, with triage to rescue angioplasty for patients in whom the 60-minute cardiac marker values or indexes are consistent with occlusion of the infarct-related artery.


Subject(s)
Creatine Kinase/blood , Myocardial Infarction/blood , Myoglobin/blood , Thrombolytic Therapy , Troponin I/blood , Adult , Aged , Biomarkers/blood , Clinical Trials as Topic , Female , Humans , Isoenzymes , Male , Middle Aged , Myocardial Infarction/drug therapy , Myocardial Infarction/enzymology , Pilot Projects , ROC Curve , Severity of Illness Index , Treatment Outcome
5.
N Engl J Med ; 335(18): 1342-9, 1996 Oct 31.
Article in English | MEDLINE | ID: mdl-8857017

ABSTRACT

BACKGROUND: In patients with acute coronary syndromes, it is desirable to identify a sensitive serum marker that is closely related to the degree of myocardial damage, provides prognostic information, and can be measured rapidly. We studied the prognostic value of cardiac troponin I levels in patients with unstable angina or non-Q-wave myocardial infarction. METHODS: In a multicenter study, blood specimens from 1404 symptomatic patients were analyzed for cardiac troponin I, a serum marker not detected in the blood of healthy persons. The relation between mortality at 42 days and the level of cardiac troponin I in the specimen obtained on enrollment was determined both before and after adjustment for baseline characteristics. RESULTS: The mortality rate at 42 days was significantly higher in the 573 patients with cardiac troponin I levels of at least 0.4 ng per milliliter (21 deaths, or 3.7 percent) than in the 831 patients with cardiac troponin I levels below 0.4 ng per milliliter (8 deaths, or 1.0 percent; P < 0.001). There were statistically significant increases in mortality with increasing levels of cardiac troponin I (P < 0.001). Each increase of 1 ng per milliliter in the cardiac troponin I level was associated with a significant increase (P = 0.03) in the risk ratio for death after adjustment for the base-line characteristics that were independently predictive of mortality (ST-segment depression and age > or = 65 years). CONCLUSIONS: In patients with acute coronary syndromes, cardiac troponin I levels provide useful prognostic information and permit the early identification of patients with an increased risk of death.


Subject(s)
Angina, Unstable/mortality , Myocardial Infarction/mortality , Troponin I/blood , Acute Disease , Adult , Aged , Angina, Unstable/blood , Angina, Unstable/classification , Biomarkers/blood , Creatine Kinase/blood , Female , Humans , Isoenzymes , Male , Middle Aged , Multivariate Analysis , Myocardial Infarction/blood , Myocardial Infarction/classification , Odds Ratio , Prognosis , Retrospective Studies , Risk
6.
J Biol Chem ; 269(30): 19216-24, 1994 Jul 29.
Article in English | MEDLINE | ID: mdl-8034682

ABSTRACT

Stable clones of NIH 3T3 fibroblasts transfected with the cDNA of either the wild-type or deletion forms of the rat type I (or cerebellar) inositol 1,4,5-trisphosphate (IP3) receptor (IP3R) were investigated. The delta form, missing the NH2-terminal sequence that includes the IP3-binding site, is expected to be still assembled with wild-type subunits to yield a tetrameric Ca2+ channel across the endoplasmic reticulum membrane; the s form, missing the membrane-spanning sequences, is expected to remain as a soluble monomer in the cytosol. With respect to control clones transfected with the vector only, the synthesis fo IP3Rs was markedly stimulated in the receptor-transfected clones. The mass accumulation, however, was increased only moderately (deletion forms = 15-30% of the endogenous IP3R), apparently because of a compensatory increase in receptor turnover. Coordinate changes in IP3 generation and Ca2+ release were revealed in the delta clones by experiments in both intact and permeabilized cells. In these clones, the IP3R was more sensitive to IP3, and IP3 generation at the ATP P2u surface receptor was decreased. This latter effect was due neither to a defect in G protein coupling nor to changes in phospholipase C expression, but to down-regulation of the P2u receptor. In the cells expressing the s- and delta-IP3R subunits, no differences with respect to the controls were observed in epidermal growth factor-induced DNA synthesis, whereas long-term growth stimulated by serum was reduced. Even more marked, especially in the delta clones (-90%), was the inhibition of cell transformation induced by autocrine stimulation with transforming growth factor alpha of the overexpressed epidermal growth factor receptors or by other growth factor receptors and oncogenes (platelet-derived growth factor/platelet-derived growth factor receptor beta, HER2/neu, and v-erbB). These effects appear not to be connected to the signaling processes mediated by tyrosine phosphorylation since the latter was unchanged in the delta clones. These results demonstrate for the first time (a) that the changes in cellular homeostasis directly induced by deleted IP3R subunits (increased receptor synthesis and increased IP3R sensitivity) are largely compensated by indirect coordinate changes apparently aimed to keep near normal the signaling properties of the cells; (b) that modulation of intracellular Ca2+ channels induces profound consequences that differentially affect growth and oncogenesis; and (c) that IP3Rs and the Ca2+ stores are important cross-roads of intracellular signaling pathways.


Subject(s)
Calcium Channels/genetics , Calcium Channels/metabolism , Inositol 1,4,5-Trisphosphate/metabolism , Receptors, Cytoplasmic and Nuclear/genetics , Receptors, Cytoplasmic and Nuclear/metabolism , Signal Transduction , 3T3 Cells , Animals , Calcium/metabolism , Cell Division , Cerebellum/chemistry , DNA Mutational Analysis , Dose-Response Relationship, Drug , Epidermal Growth Factor/metabolism , ErbB Receptors/genetics , ErbB Receptors/metabolism , Inositol 1,4,5-Trisphosphate Receptors , Ligands , Mice , Phosphorylation , Rats , Sequence Deletion , Structure-Activity Relationship , Transforming Growth Factor alpha/metabolism
7.
Proc Natl Acad Sci U S A ; 88(7): 2951-5, 1991 Apr 01.
Article in English | MEDLINE | ID: mdl-1849282

ABSTRACT

We have identified two distinct transcripts of inositol 1,4,5-trisphosphate receptor by using the PCR on first-strand cDNAs from various rat tissues. The longer form, corresponding to the previously cloned adult rat brain inositol 1,4,5-trisphosphate receptor, contains a 120-nucleotide insert between the two cAMP-dependent protein kinase phosphorylation consensus sequences. The shorter form (lacking the insert) predominates in fetal brain and peripheral tissues and appears to represent a nonneuronal receptor, whereas the longer form is found in adult brain and appears to be exclusively neuronal. The phosphorylation kinetics by cAMP-dependent protein kinase and the phosphopeptide maps differ for inositol 1,4,5-trisphosphate receptors purified from tissues predominantly expressing different forms of the transcript.


Subject(s)
Calcium Channels , Cerebellum/metabolism , Neurons/metabolism , Protein Processing, Post-Translational , RNA Splicing , Receptors, Cell Surface/genetics , Receptors, Cytoplasmic and Nuclear , Amino Acid Sequence , Animals , Base Sequence , DNA/genetics , DNA/isolation & purification , Inositol 1,4,5-Trisphosphate Receptors , Inositol Phosphates/metabolism , Kinetics , Male , Molecular Sequence Data , Oligonucleotide Probes , Organ Specificity , Phosphorylation , Polymerase Chain Reaction , Rats , Receptors, Cell Surface/metabolism , Vas Deferens/metabolism
8.
Cancer Biochem Biophys ; 1(4): 211-4, 1976 May.
Article in English | MEDLINE | ID: mdl-987844

ABSTRACT

Deoxyguanosine was found to inhibit reduction of uridine phosphate within L5178Y cells. A correlation of this effect with deoxyguanosine-induced inhibition of radioactive incorporation into DNA and inhibition of L5178Y cell growth suggests that depletion of thymidylate pools is involved in the toxicity induced by deoxyguanosine. Deoxycytidine appears to protect from deoxyguanosine toxicity by metabolism to thymidylate via a dCMP deaminase pathway, thus replenishing the thymidylate pools which have been depleted by deoxyguanosine.


Subject(s)
Deoxycytidine/metabolism , Leukemia, Experimental/metabolism , Pyrimidine Nucleotides/metabolism , Animals , Cell Line , Cell Survival/drug effects , DNA Replication/drug effects , Deoxyribonucleosides/pharmacology
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