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1.
J Neurosci ; 43(30): 5468-5482, 2023 07 26.
Article in English | MEDLINE | ID: mdl-37414561

ABSTRACT

The rod photoreceptor synapse is the first synapse of dim-light vision and one of the most complex in the mammalian CNS. The components of its unique structure, a presynaptic ribbon and a single synaptic invagination enclosing several postsynaptic processes, have been identified, but disagreements about their organization remain. Here, we have used EM tomography to generate high-resolution images of 3-D volumes of the rod synapse from the female domestic cat. We have resolved the synaptic ribbon as a single structure, with a single arciform density, indicating the presence of one long site of transmitter release. The organization of the postsynaptic processes, which has been difficult to resolve with past methods, appears as a tetrad arrangement of two horizontal cell and two rod bipolar cell processes. Retinal detachment severely disrupts this organization. After 7 d, EM tomography reveals withdrawal of rod bipolar dendrites from most spherules; fragmentation of synaptic ribbons, which lose their tight association with the presynaptic membrane; and loss of the highly branched telodendria of the horizontal cell axon terminals. After detachment, the hilus, the opening through which postsynaptic processes enter the invagination, enlarges, exposing the normally sequestered environment within the invagination to the extracellular space of the outer plexiform layer. Our use of EM tomography provides the most accurate description to date of the complex rod synapse and details changes it undergoes during outer segment degeneration. These changes would be expected to disrupt the flow of information in the rod pathway.SIGNIFICANCE STATEMENT Ribbon-type synapses transmit the first electrical signals of vision and hearing. Despite their crucial role in sensory physiology, the three-dimensional ultrastructure of these synapses, especially the complex organization of the rod photoreceptor synapse, is not well understood. We used EM tomography to obtain 3-D imaging at nanoscale resolution to help resolve the organization of rod synapses in normal and detached retinas. This approach has enabled us to show that in the normal retina a single ribbon and arciform density oppose a tetrad of postsynaptic processes. In addition, it enabled us to provide a 3-D perspective of the ultrastructural changes that occur in response to retinal detachment.


Subject(s)
Retinal Detachment , Female , Animals , Cats , Microscopy, Electron , Synapses/metabolism , Retina/ultrastructure , Retinal Bipolar Cells , Retinal Rod Photoreceptor Cells/ultrastructure , Mammals
2.
Sci Transl Med ; 11(485)2019 03 27.
Article in English | MEDLINE | ID: mdl-30918111

ABSTRACT

Tau inclusions are a shared feature of many neurodegenerative diseases, among them frontotemporal dementia caused by tau mutations. Treatment approaches for these conditions include targeting posttranslational modifications of tau proteins, maintaining a steady-state amount of tau, and preventing its tendency to aggregate. We discovered a new regulatory pathway for tau degradation that operates through the farnesylated protein, Rhes, a GTPase in the Ras family. Here, we show that treatment with the farnesyltransferase inhibitor lonafarnib reduced Rhes and decreased brain atrophy, tau inclusions, tau sumoylation, and tau ubiquitination in the rTg4510 mouse model of tauopathy. In addition, lonafarnib treatment attenuated behavioral abnormalities in rTg4510 mice and reduced microgliosis in mouse brain. Direct reduction of Rhes in the rTg4510 mouse by siRNA reproduced the results observed with lonafarnib treatment. The mechanism of lonafarnib action mediated by Rhes to reduce tau pathology was shown to operate through activation of lysosomes. We finally showed in mouse brain and in human induced pluripotent stem cell-derived neurons a normal developmental increase in Rhes that was initially suppressed by tau mutations. The known safety of lonafarnib revealed in human clinical trials for cancer suggests that this drug could be repurposed for treating tauopathies.


Subject(s)
Farnesyltranstransferase/antagonists & inhibitors , Tauopathies/drug therapy , Tauopathies/metabolism , Animals , Brain/drug effects , Brain/metabolism , Brain/pathology , Disease Models, Animal , Enzyme Inhibitors/pharmacology , Female , GTP-Binding Proteins/antagonists & inhibitors , GTP-Binding Proteins/genetics , GTP-Binding Proteins/metabolism , Humans , Induced Pluripotent Stem Cells/drug effects , Induced Pluripotent Stem Cells/metabolism , Lysosomes/drug effects , Lysosomes/metabolism , Male , Mice , Mice, Transgenic , Mutation , Neurons/drug effects , Neurons/metabolism , Piperidines/pharmacology , Proteolysis/drug effects , Pyridines/pharmacology , RNA, Small Interfering/genetics , Tauopathies/pathology , Translational Research, Biomedical , tau Proteins/genetics , tau Proteins/metabolism
3.
Invest Ophthalmol Vis Sci ; 59(6): 2538-2547, 2018 05 01.
Article in English | MEDLINE | ID: mdl-29847661

ABSTRACT

Purpose: We examined outer retinal remodeling of the euthermic and torpid cone-dominant 13-lined ground squirrel (13-LGS) retina using optical coherence tomography (OCT) imaging and histology. Methods: Retinas and corneas of living 13-LGSs were imaged during euthermic and torpid physiological states using OCT. Retinal layer thickness was measured at the visual streak from registered and averaged vertical B-scans. Following OCT, some retinas were collected immediately for postmortem histologic comparison using light microscopy, immunofluorescence, or transmission electron microscopy. Results: Compared to OCT images from euthermic retinae, OCT images of torpid retinae revealed significantly thicker inner and outer nuclear layers, as well as increases in the distances between outer retinal reflectivity bands 1 and 2, and bands 3 and 4. A significant decrease in the distance between bands 2 and 3 also was seen, alongside significant thinning of the choriocapillaris and choroid. OCT image quality was reduced in torpid eyes, partly due to significant thickening of the corneal stroma during this state. Conclusions: The torpid retina of the hibernating 13-LGS undergoes structural changes that can be detected by OCT imaging. Comparisons between in vivo OCT and ex vivo histomorphometry may offer insight to the origin of hyperreflective OCT bands within the outer retina of the cone-dominant 13-LGS.


Subject(s)
Cornea/physiology , Hibernation/physiology , Retina/physiology , Torpor/physiology , Animals , Basal Metabolism , Cornea/diagnostic imaging , Cornea/ultrastructure , Female , Fluorescent Antibody Technique, Indirect , Male , Microscopy, Electron, Transmission , Retina/diagnostic imaging , Retina/ultrastructure , Retinal Cone Photoreceptor Cells/physiology , Retinal Cone Photoreceptor Cells/ultrastructure , Sciuridae , Tomography, Optical Coherence
4.
Glia ; 66(3): 623-636, 2018 03.
Article in English | MEDLINE | ID: mdl-29178409

ABSTRACT

Sox2 is a transcriptional regulator that is highly expressed in retinal astrocytes, yet its function in these cells has not previously been examined. To understand its role, we conditionally deleted Sox2 from the population of astrocytes and examined the consequences on retinal development. We found that Sox2 deletion does not alter the migration of astrocytes, but it impairs their maturation, evidenced by the delayed upregulation of glial fibrillary acidic protein (GFAP) across the retina. The centro-peripheral gradient of angiogenesis is also delayed in Sox2-CKO retinas. In the mature retina, we observed lasting abnormalities in the astrocytic population evidenced by the sporadic loss of GFAP immunoreactivity in the peripheral retina as well as by the aberrant extension of processes into the inner retina. Blood vessels in the adult retina are also under-developed and show a decrease in the frequency of branch points and in total vessel length. The developmental relationship between maturing astrocytes and angiogenesis suggests a causal relationship between the astrocytic loss of Sox2 and the vascular architecture in maturity. We suggest that the delay in astrocytic maturation and vascular invasion may render the retina hypoxic, thereby causing the abnormalities we observe in adulthood. These studies uncover a novel role for Sox2 in the development of retinal astrocytes and indicate that its removal can lead to lasting changes to retinal homeostasis.


Subject(s)
Astrocytes/metabolism , Retina/growth & development , Retinal Vessels/growth & development , SOXB1 Transcription Factors/metabolism , Animals , Astrocytes/cytology , Glial Fibrillary Acidic Protein/genetics , Glial Fibrillary Acidic Protein/metabolism , Mice, Transgenic , Retina/cytology , Retina/metabolism , Retinal Vessels/cytology , Retinal Vessels/metabolism , SOXB1 Transcription Factors/genetics
5.
J Tissue Eng ; 7: 2041731416670482, 2016.
Article in English | MEDLINE | ID: mdl-27733898

ABSTRACT

One of the most common regenerative therapies is autologous fat grafting, which frequently suffers from unexpected volume loss. One approach is to deliver adipose stem cells encapsulated in the engineered hydrogels supportive of cell survival, differentiation, and integration after transplant. We describe an encapsulating, biomimetic poly(ethylene)-glycol hydrogel, with embedded peptides for attachment and biodegradation. Poly(ethylene)-glycol hydrogels containing an Arg-Gly-Asp attachment sequence and a matrix metalloprotease 3/10 cleavage site supported adipose stem cell survival and showed remodeling initiated by adipogenic differentiation. Arg-Gly-Asp-matrix metalloprotease 3/10 cleavage site hydrogels showed an increased number and area of lacunae or holes after adipose stem cell differentiation. Image analysis of adipose stem cells in Arg-Gly-Asp-matrix metalloprotease 3/10 cleavage site hydrogels showed larger Voronoi domains, while cell density remained unchanged. The differentiated adipocytes residing within these newly remodeled spaces express proteins and messenger RNAs indicative of adipocytic differentiation. These engineered scaffolds may provide niches for stem cell differentiation and could prove useful in soft tissue regeneration.

6.
Invest Ophthalmol Vis Sci ; 57(11): 4641-54, 2016 09 01.
Article in English | MEDLINE | ID: mdl-27603725

ABSTRACT

PURPOSE: The purpose of this study was to examine the rpea1 mouse whose retina spontaneously detaches from the underlying RPE as a potential model for studying the cellular effects of serous retinal detachment (SRD). METHODS: Optical coherence tomography (OCT) was performed immediately prior to euthanasia; retinal tissue was subsequently prepared for Western blotting, microarray analysis, immunocytochemistry, and light and electron microscopy (LM, EM). RESULTS: By postnatal day (P) 30, OCT, LM, and EM revealed the presence of small shallow detachments that increased in number and size over time. By P60 in regions of detachment, there was a dramatic loss of PNA binding around cones in the interphotoreceptor matrix and a concomitant increase in labeling of the outer nuclear layer and rod synaptic terminals. Retinal pigment epithelium wholemounts revealed a patchy loss in immunolabeling for both ezrin and aquaporin 1. Anti-ezrin labeling was lost from small regions of the RPE apical surface underlying detachments at P30. Labeling for tight-junction proteins provided a regular array of profiles outlining the periphery of RPE cells in wild-type tissue, however, this pattern was disrupted in the mutant as early as P30. Microarray analysis revealed a broad range of changes in genes involved in metabolism, signaling, cell polarity, and tight-junction organization. CONCLUSIONS: These data indicate changes in this mutant mouse that may provide clues to the underlying mechanisms of SRD in humans. Importantly, these changes include the production of multiple spontaneous detachments without the presence of a retinal tear or significant degeneration of outer segments, changes in the expression of proteins involved in adhesion and fluid transport, and a disrupted organization of RPE tight junctions that may contribute to the formation of focal detachments.


Subject(s)
DNA/genetics , Eye Proteins/genetics , Gene Expression , Retinal Detachment/genetics , Retinal Pigment Epithelium/ultrastructure , Tomography, Optical Coherence/methods , Animals , Atrophy , Blotting, Western , Eye Proteins/biosynthesis , Fluorescein Angiography , Fundus Oculi , Immunohistochemistry , Mice , Mice, Inbred C57BL , Microscopy, Electron , Photoreceptor Cells, Vertebrate/metabolism , Photoreceptor Cells, Vertebrate/ultrastructure , Real-Time Polymerase Chain Reaction , Retinal Detachment/metabolism , Retinal Detachment/pathology
7.
Regen Med ; 11(6): 589-99, 2016 09.
Article in English | MEDLINE | ID: mdl-27484203

ABSTRACT

Regenerative medicine possesses the potential to ameliorate damage to tissue that results from a vast range of conditions, including traumatic injury, tumor resection and inherited tissue defects. Adult stem cells, while more limited in their potential than pluripotent stem cells, are still capable of differentiating into numerous lineages and provide feasible allogeneic and autologous treatment options for many conditions. Adipose stem cells are one of the most abundant types of stem cell in the adult human. Here, we review recent advances in the development of synthetic scaffolding systems used in concert with adipose stem cells and assess their potential use for clinical applications.


Subject(s)
Adipose Tissue/cytology , Cell- and Tissue-Based Therapy , Regeneration/physiology , Stem Cell Transplantation , Stem Cells/cytology , Tissue Engineering/methods , Tissue Scaffolds , Adipose Tissue/transplantation , Animals , Humans
8.
Exp Eye Res ; 150: 4-21, 2016 09.
Article in English | MEDLINE | ID: mdl-27060374

ABSTRACT

Although retinal neurodegenerative conditions such as age-related macular degeneration, glaucoma, diabetic retinopathy, retinitis pigmentosa, and retinal detachment have different etiologies and pathological characteristics, they also have many responses in common at the cellular level, including neural and glial remodeling. Structural changes in Müller cells, the large radial glia of the retina in retinal disease and injury have been well described, that of the retinal astrocytes remains less so. Using modern imaging technology to describe the structural remodeling of retinal astrocytes after retinal detachment is the focus of this paper. We present both a review of critical literature as well as novel work focusing on the responses of astrocytes following rhegmatogenous and serous retinal detachment. The mouse presents a convenient model system in which to study astrocyte reactivity since the Mϋller cell response is muted in comparison to other species thereby allowing better visualization of the astrocytes. We also show data from rat, cat, squirrel, and human retina demonstrating similarities and differences across species. Our data from immunolabeling and dye-filling experiments demonstrate previously undescribed morphological characteristics of normal astrocytes and changes induced by detachment. Astrocytes not only upregulate GFAP, but structurally remodel, becoming increasingly irregular in appearance, and often penetrating deep into neural retina. Understanding these responses, their consequences, and what drives them may prove to be an important component in improving visual outcome in a variety of therapeutic situations. Our data further supports the concept that astrocytes are important players in the retina's overall response to injury and disease.


Subject(s)
Astrocytes/pathology , Retinal Detachment/pathology , Retinal Ganglion Cells/pathology , Animals , Cats , Cell Plasticity , Disease Models, Animal , Ependymoglial Cells/pathology , Humans , Mice , Mice, Mutant Strains , Rats , Rats, Long-Evans , Sciuridae
9.
Vis Neurosci ; 33: e003, 2016.
Article in English | MEDLINE | ID: mdl-26923645

ABSTRACT

Ground squirrels are an increasingly important model for studying visual processing, retinal circuitry, and cone photoreceptor function. Here, we demonstrate that the photoreceptor mosaic can be longitudinally imaged noninvasively in the 13-lined ground squirrel (Ictidomys tridecemlineatus) using confocal and nonconfocal split-detection adaptive optics scanning ophthalmoscopy using 790 nm light. Photoreceptor density, spacing, and Voronoi analysis are consistent with that of the human cone mosaic. The high imaging success rate and consistent image quality in this study reinforce the ground squirrel as a practical model to aid drug discovery and testing through longitudinal imaging on the cellular scale.


Subject(s)
Ophthalmoscopy/methods , Retinal Cone Photoreceptor Cells/cytology , Retinal Rod Photoreceptor Cells/cytology , Animals , Female , Male , Sciuridae
10.
J Ophthalmol ; 2015: 583040, 2015.
Article in English | MEDLINE | ID: mdl-26664739

ABSTRACT

Purpose. The pathogenesis of rhegmatogenous retinal detachment (RRD) remains incompletely understood, with no clinically effective treatment for potentially severe complications such as photoreceptor cell death and proliferative vitreoretinopathy. Here we investigate the protein profile of the vitreous following experimental retinal detachment using a comparative proteomic based approach. Materials and Methods. Retinal detachment was created in the right eyes of six New Zealand red pigmented rabbits. Sham surgery was undertaken in five other rabbits that were used as controls. After seven days the eyes were enucleated and the vitreous was removed. The vitreous samples were evaluated with two-dimensional polyacrylamide gel electrophoresis and the differentially expressed proteins were identified with tandem mass spectrometry. Results. Ten protein spots were found to be at least twofold differentially expressed when comparing the vitreous samples of the sham and retinal detachment surgery groups. Protein spots that were upregulated in the vitreous following retinal detachment were identified as albumin fragments, and those downregulated were found to be peroxiredoxin 2, collagen-Iα1 fragment, and α-1-antiproteinase F. Conclusions. Proteomic investigation of the rabbit vitreous has identified a set of proteins that help further our understanding of the pathogenesis of rhegmatogenous retinal detachment and its complications.

11.
Proc Natl Acad Sci U S A ; 112(48): 14870-5, 2015 Dec 01.
Article in English | MEDLINE | ID: mdl-26578801

ABSTRACT

The vertebrate photoreceptor cell contains an elaborate cilium that includes a stack of phototransductive membrane disks. The disk membranes are continually renewed, but how new disks are formed remains poorly understood. Here we used electron microscope tomography to obtain 3D visualization of the nascent disks of rod photoreceptors in three mammalian species, to gain insight into the process of disk morphogenesis. We observed that nascent disks are invariably continuous with the ciliary plasma membrane, although, owing to partial enclosure, they can appear to be internal in 2D profiles. Tomographic analyses of the basal-most region of the outer segment show changes in shape of the ciliary plasma membrane indicating an invagination, which is likely a first step in disk formation. The invagination flattens to create the proximal surface of an evaginating lamella, as well as membrane protrusions that extend between adjacent lamellae, thereby initiating a disk rim. Immediately distal to this initiation site, lamellae of increasing diameter are evident, indicating growth outward from the cilium. In agreement with a previous model, our data indicate that mature disks are formed once lamellae reach full diameter, and the growth of a rim encloses the space between adjacent surfaces of two lamellae. This study provides 3D data of nascent and mature rod photoreceptor disk membranes at unprecedented z-axis depth and resolution, and provides a basis for addressing fundamental questions, ranging from protein sorting in the photoreceptor cilium to photoreceptor electrophysiology.


Subject(s)
Intracellular Membranes/ultrastructure , Retinal Rod Photoreceptor Cells/ultrastructure , Animals , Cats , Cilia/metabolism , Cilia/ultrastructure , Intracellular Membranes/metabolism , Macaca mulatta , Mice , Retinal Rod Photoreceptor Cells/metabolism
12.
Bioinformatics ; 31(12): 2024-31, 2015 Jun 15.
Article in English | MEDLINE | ID: mdl-25686636

ABSTRACT

MOTIVATION: In addition to being involved in retinal vascular growth, astrocytes play an important role in diseases and injuries, such as glaucomatous neuro-degeneration and retinal detachment. Studying astrocytes, their morphological cell characteristics and their spatial relationships to the surrounding vasculature in the retina may elucidate their role in these conditions. RESULTS: Our results show that in normal healthy retinas, the distribution of observed astrocyte cells does not follow a uniform distribution. The cells are significantly more densely packed around the blood vessels than a uniform distribution would predict. We also show that compared with the distribution of all cells, large cells are more dense in the vicinity of veins and toward the optic nerve head whereas smaller cells are often more dense in the vicinity of arteries. We hypothesize that since veinal astrocytes are known to transport toxic metabolic waste away from neurons they may be more critical than arterial astrocytes and therefore require larger cell bodies to process waste more efficiently. AVAILABILITY AND IMPLEMENTATION: A 1/8th size down-sampled version of the seven retinal image mosaics described in this article can be found on BISQUE (Kvilekval et al., 2010) at http://bisque.ece.ucsb.edu/client_service/view?resource=http://bisque.ece.ucsb.edu/data_service/dataset/6566968.


Subject(s)
Astrocytes/cytology , Neurons/cytology , Retina/cytology , Animals , Cells, Cultured , Image Processing, Computer-Assisted , Mice
13.
J Clin Invest ; 125(1): 105-16, 2015 Jan.
Article in English | MEDLINE | ID: mdl-25415434

ABSTRACT

Alternative splicing of nucleoredoxin-like 1 (Nxnl1) results in 2 isoforms of the rod-derived cone viability factor. The truncated form (RdCVF) is a thioredoxin-like protein secreted by rods that promotes cone survival, while the full-length isoform (RdCVFL), which contains a thioredoxin fold, is involved in oxidative signaling and protection against hyperoxia. Here, we evaluated the effects of these different isoforms in 2 murine models of rod-cone dystrophy. We used adeno-associated virus (AAV) to express these isoforms in mice and found that both systemic and intravitreal injection of engineered AAV vectors resulted in RdCVF and RdCVFL expression in the eye. Systemic delivery of AAV92YF vectors in neonates resulted in earlier onset of RdCVF and RdCVFL expression compared with that observed with intraocular injection using the same vectors at P14. We also evaluated the efficacy of intravitreal injection using a recently developed photoreceptor-transducing AAV variant (7m8) at P14. Systemic administration of AAV92YF-RdCVF improved cone function and delayed cone loss, while AAV92YF-RdCVFL increased rhodopsin mRNA and reduced oxidative stress by-products. Intravitreal 7m8-RdCVF slowed the rate of cone cell death and increased the amplitude of the photopic electroretinogram. Together, these results indicate different functions for Nxnl1 isoforms in the retina and suggest that RdCVF gene therapy has potential for treating retinal degenerative disease.


Subject(s)
Eye Proteins/genetics , Retinal Degeneration/metabolism , Thioredoxins/genetics , Animals , Cell Survival , Dependovirus/genetics , Evoked Potentials, Visual , Eye Proteins/biosynthesis , Gene Expression , Gene Transfer Techniques , Genetic Therapy , Mice, Inbred C57BL , Photic Stimulation , Retinal Cone Photoreceptor Cells , Retinal Degeneration/pathology , Retinal Degeneration/therapy , Retinal Rod Photoreceptor Cells , Rhodopsin/genetics , Rhodopsin/metabolism , Thioredoxins/biosynthesis , Transduction, Genetic
14.
Clin Exp Ophthalmol ; 42(5): 480-5, 2014 Jul.
Article in English | MEDLINE | ID: mdl-24118698

ABSTRACT

BACKGROUND: To study the response of ON and OFF bipolar cells in experimental retinal detachment. METHODS: Domestic cat retinas were detached for 7 days. The retinas were prepared for immunocytochemical staining with antibodies to Go alpha (α), glutamate transporter GLT-1, protein kinase C and rod opsin, which serve as markers for ON bipolar cells, OFF bipolar cells, rod bipolar cells and rod photoreceptors, respectively. Both sections and whole-mounts were labelled with antibodies to Goα and GLT-1. RESULTS: Following 7 days of detachment, ON bipolar cell processes extended into the outer nuclear layer and had neurites extending beyond their target layer into the inner plexiform layer. In contrast, OFF bipolar cell processes were reduced in the outer plexiform layer following detachment. CONCLUSION: ON and OFF bipolar cells undergo significant remodelling of their processes in response to retinal detachment, and the ON and OFF pathways may be differentially affected. The remodelling may be due to morphological changes that have previously been shown to occur in photoreceptor synaptic terminals or as a result of loss of synaptic connections due to photoreceptor cell death.


Subject(s)
Retinal Bipolar Cells/physiology , Retinal Detachment/physiopathology , Animals , Biomarkers/metabolism , Cats , Disease Models, Animal , Excitatory Amino Acid Transporter 2/metabolism , Fluorescent Antibody Technique, Indirect , GTP-Binding Protein alpha Subunits, Gi-Go/metabolism , Protein Kinase C/metabolism , Rod Opsins/metabolism
15.
J Neurosci ; 33(45): 17847-62, 2013 Nov 06.
Article in English | MEDLINE | ID: mdl-24198374

ABSTRACT

The present study examined the consequences of eliminating horizontal cells from the outer retina during embryogenesis upon the organization and assembly of the outer plexiform layer (OPL). Retinal horizontal cells exhibit a migration defect in Lim1-conditional knock-out (Lim1-CKO) mice and become mispositioned in the inner retina before birth, redirecting their dendrites into the inner plexiform layer. The resultant (mature) OPL, developing in the absence of horizontal cells, shows a retraction of rod spherules into the outer nuclear layer and a sprouting of rod bipolar cell dendrites to reach ectopic ribbon-protein puncta. Cone pedicles and the dendrites of type 7 cone bipolar cells retain their characteristic stratification and colocalization within the collapsed OPL, although both are atrophic and the spatial distribution of the pedicles is disrupted. Developmental analysis of Lim1-CKO retina reveals that components of the rod and cone pathways initially co-assemble within their normal strata in the OPL, indicating that horizontal cells are not required for the correct targeting of photoreceptor terminals or bipolar cell dendrites. As the rod spherules begin to retract during the second postnatal week, rod bipolar cells initially show no signs of ectopic growth, sprouting only subsequently and continuing to do so well after the eighth postnatal week. These results demonstrate the critical yet distinctive roles for horizontal cells on the rod and cone pathways and highlight a unique and as-yet-unrecognized maintenance function of an inhibitory interneuron that is not required for the initial targeting and co-stratification of other components in the circuit.


Subject(s)
Neuronal Plasticity/physiology , Retinal Horizontal Cells/physiology , Retinal Neurons/physiology , Visual Pathways/growth & development , Animals , Female , Mice , Mice, Transgenic , Synapses/metabolism , Visual Pathways/physiology
16.
IEEE Trans Image Process ; 22(12): 4952-63, 2013 Dec.
Article in English | MEDLINE | ID: mdl-23996562

ABSTRACT

Segmentation based tracing algorithms detect the extent and borders of an object in a given frame IZ by propagating results from frames I1 ≤ z < Z. Although application specific tracers have been forthcoming, techniques that automatically adapt across applications have been less explored. We approach this problem by learning a prior model on topological dynamics that encourages segmentation transitions across frames that are most likely for a given application. Further, we augment a generic tracing technique with a locality sensitive prior derived from dense optic flow fields for deformation guidance. The proposed approach comprises two stages where the generic tracer initially yields multiple segmentation transitions when its parameters are perturbed, and the learnt topology prior subsequently propagates high scoring segmentations. Because the learnt topology model wraps around a generic tracer and adapts it by setting its free parameters, the need for careful parameter tuning is completely obviated. Through extensive experimental validation in surveillance, biological and medical image datasets, we verify the applicability of the proposed model while demonstrating good tracing performance under severe clutter.


Subject(s)
Algorithms , Image Processing, Computer-Assisted/methods , Connectome , Humans , Markov Chains , Microscopy, Electron, Transmission , Models, Theoretical , Reproducibility of Results , Video Recording
17.
Bioinformatics ; 29(7): 940-6, 2013 Apr 01.
Article in English | MEDLINE | ID: mdl-23396124

ABSTRACT

MOTIVATION: Microscopy advances have enabled the acquisition of large-scale biological images that capture whole tissues in situ. This in turn has fostered the study of spatial relationships between cells and various biological structures, which has proved enormously beneficial toward understanding organ and organism function. However, the unique nature of biological images and tissues precludes the application of many existing spatial mining and quantification methods necessary to make inferences about the data. Especially difficult is attempting to quantify the spatial correlation between heterogeneous structures and point objects, which often occurs in many biological tissues. RESULTS: We develop a method to quantify the spatial correlation between a continuous structure and point data in large (17 500 × 17 500 pixel) biological images. We use this method to study the spatial relationship between the vasculature and a type of cell in the retina called astrocytes. We use a geodesic feature space based on vascular structures and embed astrocytes into the space by spatial sampling. We then propose a quantification method in this feature space that enables us to empirically demonstrate that the spatial distribution of astrocytes is often correlated with vascular structure. Additionally, these patterns are conserved in the retina after injury. These results prove the long-assumed patterns of astrocyte spatial distribution and provide a novel methodology for conducting other spatial studies of similar tissue and structures. AVAILABILITY: The Matlab code for the method described in this article can be found at http://www.cs.ucsb.edu/∼dbl/software.php. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.


Subject(s)
Image Processing, Computer-Assisted/methods , Retina/cytology , Animals , Astrocytes/cytology , Mice , Retinal Vessels/cytology
18.
Exp Eye Res ; 104: 65-73, 2012 Nov.
Article in English | MEDLINE | ID: mdl-23036564

ABSTRACT

The aim of this study was to examine the temporal relationship between behaviorally measured visual thresholds, photoreceptor degeneration and dysfunction, synaptic and neuronal morphology changes in the retina in the S334ter line 4 rat. Specifically, we examined the optokinetic tracking (OKT) behavior in S334ter rats daily and found that OKT thresholds reflected normal values at eye opening but quickly reduced to a non-response level by postnatal day (P) 22. By contrast, the scotopic electroretinogram (ERG) showed a much slower degeneration, with substantial scotopic function remaining after P90 as previously demonstrated for this line of rats. Photopic b-wave amplitudes revealed functional levels between 70 and 100% of normal between P30 and P90. Histological evidence demonstrated that photoreceptor degeneration occurred over many months, with an outer nuclear layer (ONL) roughly half the thickness of a normal age-matched control at P90. Immunohistochemical analysis revealed a number of changes in retinal morphology in the Tg S334ter line 4 rat that occur at or before P40 including: elevated levels of rod opsin expression in the ONL, cone photoreceptor morphology changes, glial cell activation, inner retinal neuron sprouting, and microglial cell activation. Many of these changes were evident at P30 and in some cases as early as eye opening (P15). Thus, the morphological changes occurred in concert with or before the very rapid loss of the behavioral (OKT) responses, and significantly before the loss of photoreceptors and photoreceptor function.


Subject(s)
Mutation , Nystagmus, Optokinetic/physiology , Photoreceptor Cells, Vertebrate/pathology , Retinal Degeneration/physiopathology , Rhodopsin/genetics , Animals , Biomarkers/metabolism , Cell Survival , Electroretinography , Fluorescent Antibody Technique, Indirect , Microscopy, Confocal , Neuroglia/metabolism , Neuroglia/pathology , Photoreceptor Cells, Vertebrate/metabolism , Rats , Rats, Long-Evans , Rats, Transgenic , Retinal Degeneration/metabolism , Retinal Ganglion Cells/metabolism , Retinal Ganglion Cells/pathology , Sensory Thresholds/physiology , Visual Perception/physiology
19.
Mol Vis ; 17: 2634-48, 2011.
Article in English | MEDLINE | ID: mdl-22065916

ABSTRACT

PURPOSE: Retinal detachment leads to the widespread cellular remodeling of the retina. The purpose of this study was to identify protein changes that accompany these cellular alterations by comparing the proteomic profiles of sham and experimentally detached rabbit retina. Elucidation of the proteins most dramatically affected by retinal detachment would add further understanding to the pathophysiology of this condition, and potentially identify therapeutic targets useful in preventing the deleterious effects of detachment, including photoreceptor cell death and the activation of non-neuronal microglial and Müller cells. METHODS: Retinal detachments were induced in the right eyes of six New Zealand Red pigmented rabbits. Sham surgery was performed in the right eyes of six other rabbits that were used as controls. At seven days, the eyes were enucleated and the retinal tissue was harvested. The individual retinal samples were subjected to high resolution two-dimensional polyacrylamide gel electrophoresis. Differentially expressed protein spots were processed for identification by liquid chromatography-tandem mass spectrometry. Further investigation was undertaken with western blotting, and immunocytochemical studies on a further set of four sham and four detached retinas. RESULTS: Eighteen protein spots were found to be at least twofold differentially expressed between the sham and detached retinas. These protein spots were identified as: vimentin; tubulin ß-2C; fragments of α-enolase; fructose-bisphosphate aldolase A; ATP synthase subunit ß; mitochondrial creatine kinase; N-terminal fragments of albumin; prohibitin; and transducin-ß(1). CONCLUSIONS: The differentially expressed proteins determined in this study may play an important role in the cellular responses of the retina after its detachment, subsequent ability to recover following surgical reattachment, as well as in serious complications such as subretinal fibrosis and proliferative vitreoretinopathy.


Subject(s)
Eye Proteins/metabolism , Proteomics , Retina/metabolism , Retinal Detachment/metabolism , Animals , Blotting, Western , Chromatography, Liquid , Disease Models, Animal , Electrophoresis, Gel, Two-Dimensional , Eye Proteins/genetics , Gene Expression Profiling , Rabbits , Retina/physiopathology , Retinal Detachment/genetics , Retinal Detachment/physiopathology , Tandem Mass Spectrometry
20.
Mol Vis ; 17: 1794-805, 2011.
Article in English | MEDLINE | ID: mdl-21750605

ABSTRACT

PURPOSE: To quantify the extent of cellular proliferation and immunohistochemically characterize the proliferating cell types in epiretinal membranes (ERMS) from four different conditions: proliferative vitreoretinopathy (PVR), proliferative diabetic retinopathy, post-retinal detachment, and idiopathic ERM. METHODS: Forty-six ERMs were removed from patients undergoing vitrectomy and immediately fixed in paraformaldehyde. The membranes were processed whole and immunolabeled with either anti-MIB-1 or anti-SP6 to detect the K(i)-67 protein in proliferating cells, in combination with anti-glial fibrillary acidic protein or anti-vimentin to identify glia, anti-ezrin to identify retinal pigment epithelial cells, Ricinus communis to identify immune cells, and Hoechst to label nuclei. Digital images were collected using a laser scanning confocal microscope. The cell types were identified, their combined proliferative indices were tabulated as the average number of anti-K(i)-67-positive cells/mm(2) of tissue, and the number of dividing cells was related to the specific ocular condition and estimated disease duration. RESULTS: ERMs of all four types were shown to be highly cellular and contained proliferating cells identified as glia, retinal pigment epithelium, and of immune origin. In general, membranes identified as PVR had many more K(i)-67-positive cells in comparison to those in the other three categories, with the average number of K(i)-67-positive cells identified per mm(2) of tissue being 20.9 for proliferative diabetic retinopathy, 138.3 for PVR, 12.2 for post-retinal detachment, and 19.3 for idiopathic ERM. While all membrane types had dividing cells, their number was a relatively small fraction of the total number of cells present. CONCLUSIONS: The four ERM types studied demonstrated different cell types actively dividing at the time of removal, confirming that proliferation is a common event and does continue over many months. The low number of dividing cells at the time of removal in comparison to the total number of cells present, however, is an indicator that proliferation alone may not be responsible for the problems observed with the ERMs. Treatment strategies may need to take into consideration the timing of drug administration, as well as the contractile and possibly the inflammatory characteristics of the membranes to prevent the ensuing effects on the retina.


Subject(s)
Cell Proliferation , Diabetic Retinopathy/pathology , Epiretinal Membrane/pathology , Neuroglia/pathology , Retina/pathology , Retinal Detachment/pathology , Retinal Pigment Epithelium/pathology , Vitreoretinopathy, Proliferative/pathology , Vitreous Body/pathology , Cytoskeletal Proteins/analysis , Cytoskeletal Proteins/biosynthesis , Diabetic Retinopathy/metabolism , Diabetic Retinopathy/surgery , Epiretinal Membrane/metabolism , Epiretinal Membrane/surgery , Female , Glial Fibrillary Acidic Protein/analysis , Glial Fibrillary Acidic Protein/biosynthesis , Humans , Immunohistochemistry , Ki-67 Antigen/analysis , Ki-67 Antigen/biosynthesis , Male , Microscopy, Fluorescence , Neuroglia/metabolism , Retina/metabolism , Retina/surgery , Retinal Detachment/metabolism , Retinal Detachment/surgery , Retinal Pigment Epithelium/metabolism , Retinal Pigment Epithelium/surgery , Time Factors , Vimentin/analysis , Vimentin/biosynthesis , Vitrectomy , Vitreoretinopathy, Proliferative/metabolism , Vitreoretinopathy, Proliferative/surgery , Vitreous Body/metabolism , Vitreous Body/surgery
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