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1.
Nature ; 620(7974): 582-588, 2023 Aug.
Article in English | MEDLINE | ID: mdl-37558875

ABSTRACT

Owing to a long history of anthropogenic pressures, freshwater ecosystems are among the most vulnerable to biodiversity loss1. Mitigation measures, including wastewater treatment and hydromorphological restoration, have aimed to improve environmental quality and foster the recovery of freshwater biodiversity2. Here, using 1,816 time series of freshwater invertebrate communities collected across 22 European countries between 1968 and 2020, we quantified temporal trends in taxonomic and functional diversity and their responses to environmental pressures and gradients. We observed overall increases in taxon richness (0.73% per year), functional richness (2.4% per year) and abundance (1.17% per year). However, these increases primarily occurred before the 2010s, and have since plateaued. Freshwater communities downstream of dams, urban areas and cropland were less likely to experience recovery. Communities at sites with faster rates of warming had fewer gains in taxon richness, functional richness and abundance. Although biodiversity gains in the 1990s and 2000s probably reflect the effectiveness of water-quality improvements and restoration projects, the decelerating trajectory in the 2010s suggests that the current measures offer diminishing returns. Given new and persistent pressures on freshwater ecosystems, including emerging pollutants, climate change and the spread of invasive species, we call for additional mitigation to revive the recovery of freshwater biodiversity.


Subject(s)
Biodiversity , Conservation of Water Resources , Environmental Monitoring , Fresh Water , Invertebrates , Animals , Introduced Species/trends , Invertebrates/classification , Invertebrates/physiology , Europe , Human Activities , Conservation of Water Resources/statistics & numerical data , Conservation of Water Resources/trends , Hydrobiology , Time Factors , Crop Production , Urbanization , Global Warming , Water Pollutants/analysis
2.
Sci Total Environ ; 867: 161537, 2023 Apr 01.
Article in English | MEDLINE | ID: mdl-36640879

ABSTRACT

Europe has experienced a substantial increase in non-indigenous crayfish species (NICS) since the mid-20th century due to their extensive use in fisheries, aquaculture and, more recently, pet trade. Despite relatively long invasion histories of some NICS and negative impacts on biodiversity and ecosystem functioning, large spatio-temporal analyses of their occurrences are lacking. Here, we used a large freshwater macroinvertebrate database to evaluate what information on NICS can be obtained from widely applied biomonitoring approaches and how usable such data is for descriptions of trends in identified NICS species. We found 160 time-series containing NICS between 1983 and 2019, to infer temporal patterns and environmental drivers of species and region-specific trends. Using a combination of meta-regression and generalized linear models, we found no significant temporal trend for the abundance of any species (Procambarus clarkii, Pacifastacus leniusculus or Faxonius limosus) at the European scale, but identified species-specific predictors of abundances. While analysis of the spatial range expansion of NICS was positive (i.e. increasing spread) in England and negative (significant retreat) in northern Spain, no trend was detected in Hungary and the Dutch-German-Luxembourg region. The average invasion velocity varied among countries, ranging from 30 km/year in England to 90 km/year in Hungary. The average invasion velocity gradually decreased over time in the long term, with declines being fastest in the Dutch-German-Luxembourg region, and much slower in England. Considering that NICS pose a substantial threat to aquatic biodiversity across Europe, our study highlights the utility and importance of collecting high resolution (i.e. annual) biomonitoring data using a sampling protocol that is able to estimate crayfish abundance, enabling a more profound understanding of NICS impacts on biodiversity.


Subject(s)
Astacoidea , Ecosystem , Animals , Introduced Species , Biodiversity , Rivers
3.
Zootaxa ; 4981(1): 177187, 2021 Jun 03.
Article in English | MEDLINE | ID: mdl-34186949

ABSTRACT

Leptocerina is an endemic Afrotropical genus of Trichoptera, with 19 species documented but only five partially described at the larval stage. The first description of Leptocerina pauliani (Ross 1957) larva by Marlier Marlier (1982) included very few illustrations, making comparisons with other species challenging. I present a revised description of the L. pauliani larval stage, using specimens collected from the River Marsouins in La Réunion Island. I apply a focus stacking approach for emphasizing coloration patterns and providing a detailed description of larval characters. Criteria for distinguishing L. pauliani from the other species of Leptocerina already described or partially described for the larval stage are discussed.


Subject(s)
Holometabola/classification , Animals , Holometabola/anatomy & histology , Larva , Reunion
4.
Syst Biol Reprod Med ; 67(1): 64-78, 2021 Feb.
Article in English | MEDLINE | ID: mdl-33719832

ABSTRACT

The aim of this work was to construct a score issued from a machine learning system with self-improvement capacity able to predict the fate of an ART embryo incubated in a time lapse monitoring (TLM) system. A retrospective study was performed. For the training data group, 110 couples were included and, 891 embryos were cultured. For the global setting data group, 201 couples were included, and 1186 embryos were cultured. No image analysis was used; morphokinetic parameters from the first three days of embryo culture were used to perform a logistic regression between the cell number and time. A score named DynScore was constructed, the prediction power of the DynScore on blastocyst formation and the baby delivery were tested via the area under the curve (AUC) obtained from the receiver operating characteristic (ROC). In the training data group, the DynScore allowed the blastocyst formation prediction (AUC = 0.634, p < 0.001), this approach was the higher among the set of the tested scores. Similar results were found with the global setting data group (AUC = 0.638, p < 0.001) and it was possible to increase the AUC of the DynScore with a regular update of the prediction system by reinforcement, with an AUC able to reach a value above 0.9. As only the best blastocysts were transferred, none of the tested scores was able to predict delivery. In conclusion, the DynScore seems to be able to predict the fate of an embryo. The reinforcement of the prediction system allows maintaining the predictive capacity of DynScore irrespective of the various events that may occur during the ART process. The DynScore could be implemented in any TLM system and adapted by itself to the data of any ART center.Abbreviations: ART: assisted reproduction technology; TLM: time lapse monitoring system; AUC: area under the curve; ROC: receiver operating characteristic; eSET: elective single embryo transfer; AIS: artificial intelligence system; KID: known implantation data; AMH: anti-Müllerian hormone; BMI: body mass index; WHO: World Health Organization; c-IVF: conventional in-vitro fertilization; ICSI: intracytoplasmic sperm injection; PNf: pronuclear formation; D3: day 3; D5: day 5; D6: day 6; GnRH: gonadotrophin releasing hormone; FSH: follicle stimulating hormone; LH: luteinizing hormone; hCG: human chorionic gonadotropin; PVP: polyvinyl pyrrolidone; PNf: time of pronuclear fading; tx: time of cleavage to x blastomeres embryo; ICM: inner cell mass; TE: trophectoderm; NbCellt: number of cells at t time; FIFO: first in first out; TD: training data group; SD: setting data group; R: real world.


Subject(s)
Embryonic Development , Machine Learning , Reproductive Techniques, Assisted , Adult , Embryo Culture Techniques , Embryo, Mammalian/cytology , Female , Humans , Kinetics , Male , Maternal Age , Models, Biological , Predictive Value of Tests , Retrospective Studies , Single Embryo Transfer
5.
Sci Data ; 7(1): 386, 2020 11 11.
Article in English | MEDLINE | ID: mdl-33177529

ABSTRACT

Dispersal is an essential process in population and community dynamics, but is difficult to measure in the field. In freshwater ecosystems, information on biological traits related to organisms' morphology, life history and behaviour provides useful dispersal proxies, but information remains scattered or unpublished for many taxa. We compiled information on multiple dispersal-related biological traits of European aquatic macroinvertebrates in a unique resource, the DISPERSE database. DISPERSE includes nine dispersal-related traits subdivided into 39 trait categories for 480 taxa, including Annelida, Mollusca, Platyhelminthes, and Arthropoda such as Crustacea and Insecta, generally at the genus level. Information within DISPERSE can be used to address fundamental research questions in metapopulation ecology, metacommunity ecology, macroecology and evolutionary ecology. Information on dispersal proxies can be applied to improve predictions of ecological responses to global change, and to inform improvements to biomonitoring, conservation and management strategies. The diverse sources used in DISPERSE complement existing trait databases by providing new information on dispersal traits, most of which would not otherwise be accessible to the scientific community.


Subject(s)
Animal Distribution , Aquatic Organisms , Invertebrates , Animals , Conservation of Natural Resources , Ecology , Environmental Monitoring , Europe
6.
Environ Sci Pollut Res Int ; 26(11): 11496-11502, 2019 Apr.
Article in English | MEDLINE | ID: mdl-30864032

ABSTRACT

Growth regulator insecticides with juvenoid activity can affect the development and reproduction of non-target organisms such as crustaceans. In this perspective, our previous studies revealed deleterious effects of the juvenoid fenoxycarb at 5 µg L-1 on the embryogenesis and at 50 µg L-1 on the reproductive behavior of the amphipod Gammarus fossarum. In the present study, to determine whether data generated with one amphipod species can be extended to other gammarid species, we tested the effects of a 5 µg L-1 fenoxycarb exposure on three European amphipod species: G. fossarum, Gammarus roeseli, and Echinogammarus longisetosus. We exposed individually 60 freshly fertilized females to fenoxycarb throughout the entire oogenesis/embryogenesis cycle (i.e., 19 days). In newborn individuals from exposed embryos, we measured both pigmentation and lipid reserve impairments while in exposed females, we observed reproductive behavior. At 5 µg L-1 fenoxycarb, reproductive behavior was only altered in G. fossarum. This study demonstrates the variability of the toxic response among the three gammaridae species, underlining the need for acquiring data with a broad phylogenetic representation to better predict toxic effects on freshwater ecosystems.


Subject(s)
Amphipoda/drug effects , Insecticides/toxicity , Phenylcarbamates/toxicity , Water Pollutants, Chemical/toxicity , Amphipoda/physiology , Animals , Embryonic Development/drug effects , Female , France , Rivers/chemistry , Species Specificity
7.
Zootaxa ; 4402(1): 91-112, 2018 Mar 27.
Article in English | MEDLINE | ID: mdl-29690279

ABSTRACT

The morphology of the larvae of three French species of Psychomyiinae: Psychomyia pusilla, Metalype fragilis and Paduniella vandeli are described. A set of characters on the head, the prothorax, and the anal prolegs makes it possible to identify the larvae of the fourth and fifth instars. A brief study of the world distribution of the genera Psychomyia, Metalype, and Paduniella is presented. An examination of the larvae of these three genera from literature data and personal observations offered us the possibility to test the validity of the set of characters obtained for the three French species. A key (with comments) of the three genera is provided.


Subject(s)
Holometabola , Animal Structures , Animals , Insecta , Larva
8.
Zootaxa ; 3682: 191-9, 2013.
Article in English | MEDLINE | ID: mdl-25243283

ABSTRACT

Co-occurrence of mature larvae and male pharate pupae in benthos samples from the Loire River enabled descriptions of the larva of Homilia leucophaea. Using characters of the head capsule, the labrum, the meso- and metanotum, and the pro- and metathoracic legs, we compared H. leucophaea with larvae of six western European Athripsodes species, including a larval key to these species. The larva of H. leucophaea shares characters with some of the six Athripsodes species. However, without a phylogenetic analysis including larvae, pupae, and adults of Homilia species from the Afrotropical Region, it is currently impossible to decide about a potential synonymy between Athripsodes and Homilia.


Subject(s)
Insecta/anatomy & histology , Insecta/classification , Animals , Europe , France , Insecta/growth & development , Larva/anatomy & histology , Larva/classification , Male , Pupa/anatomy & histology , Pupa/classification
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