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1.
J Invertebr Pathol ; 201: 107996, 2023 Nov.
Article in English | MEDLINE | ID: mdl-37783231

ABSTRACT

Host-associated microbial communities are an important determinant of individual fitness and have recently been highlighted as one of the factors influencing the success of invasive species. Invasive hosts introduce their microbes into the new environment, and then both the host and its associated microbes enter into a series of interactions with the native macroscopic and microscopic biota. As these processes are largely unexplored, we aimed to compare the exoskeletal microbial communities of co-occurring and phylogenetically related crayfish: the native narrow-clawed crayfish Pontastacus leptodactylus and the invasive signal crayfish Pacifastacus leniusculus from the recently invaded Korana River, Croatia. The results of high-throughput 16S rRNA sequencing showed that the exoskeletal microbiome of both species is very diverse, significantly influenced by the local environment and dominated by low abundance bacterial families from the phylum Proteobacteria. Furthermore, the exoskeletal microbiomes of the crayfish species differed significantly in the composition and abundance of Amplicon Sequence Variants (ASVs), suggesting that they are to some extent shaped by species-specific intrinsic factors, despite sharing a common habitat. However, over 95% of the bacterial genera associated with the exoskeleton were detected in the exoskeleton samples of both native and invasive crayfish. We paid particular attention to two known crayfish pathogens, Aphanomyces astaci and Saprolegnia parasitica, and find that both species carry low amounts of both pathogens. On the side, we find that a non-standard ddPCR protocol outperforms standard qPCR test for A. astaci under low concentration conditions. Taken together, our results indicate the possibility of bidirectional mixing and homogenisation of exoskeleton microbiome. As such, they can serve as a baseline in future detangling of the processes that act together to shape the microbiomes of co-occuring native and invasive congeners during biological invasions.


Subject(s)
Aphanomyces , Exoskeleton Device , Microbiota , Humans , Animals , Astacoidea/microbiology , Introduced Species , RNA, Ribosomal, 16S/genetics , Aphanomyces/genetics
2.
Microorganisms ; 10(9)2022 Aug 31.
Article in English | MEDLINE | ID: mdl-36144366

ABSTRACT

Vibrio spp. have an important role in biogeochemical cycles; some species are disease agents for aquatic animals and/or humans. Predicting population dynamics of Vibrio spp. in natural environments is crucial to predicting how the future conditions will affect the dynamics of these bacteria. The majority of existing Vibrio spp. population growth models were developed in controlled environments, and their applicability to natural environments is unknown. We collected all available functional models from the literature, and distilled them into 28 variants using unified nomenclature. Next, we assessed their ability to predict Vibrio spp. abundance using two new and five already published longitudinal datasets on Vibrio abundance in four different habitat types. Results demonstrate that, while the models were able to predict Vibrio spp. abundance to an extent, the predictions were not reliable. Models often underperformed, especially in environments under significant anthropogenic influence such as aquaculture and urban coastal habitats. We discuss implications and limitations of our analysis, and suggest research priorities; in particular, we advocate for measuring and modeling organic matter.

3.
Proc Natl Acad Sci U S A ; 117(30): 17650-17655, 2020 07 28.
Article in English | MEDLINE | ID: mdl-32669434

ABSTRACT

Collective risks permeate society, triggering social dilemmas in which working toward a common goal is impeded by selfish interests. One such dilemma is mitigating runaway climate change. To study the social aspects of climate-change mitigation, we organized an experimental game and asked volunteer groups of three different sizes to invest toward a common mitigation goal. If investments reached a preset target, volunteers would avoid all consequences and convert their remaining capital into monetary payouts. In the opposite case, however, volunteers would lose all their capital with 50% probability. The dilemma was, therefore, whether to invest one's own capital or wait for others to step in. We find that communicating sentiment and outlook helps to resolve the dilemma by a fundamental shift in investment patterns. Groups in which communication is allowed invest persistently and hardly ever give up, even when their current investment deficits are substantial. The improved investment patterns are robust to group size, although larger groups are harder to coordinate, as evidenced by their overall lower success frequencies. A clustering algorithm reveals three behavioral types and shows that communication reduces the abundance of the free-riding type. Climate-change mitigation, however, is achieved mainly by cooperator and altruist types stepping up and increasing contributions as the failure looms. Meanwhile, contributions from free riders remain flat throughout the game. This reveals that the mechanisms behind avoiding collective risks depend on an interaction between behavioral type, communication, and timing.


Subject(s)
Behavior , Climate Change , Communication , Models, Theoretical , Humans
4.
J R Soc Interface ; 17(164): 20190789, 2020 03.
Article in English | MEDLINE | ID: mdl-32126192

ABSTRACT

Cooperation is the backbone of modern human societies, making it a priority to understand how successful cooperation-sustaining mechanisms operate. Cyclic dominance, a non-transitive set-up comprising at least three strategies wherein the first strategy overrules the second, which overrules the third, which, in turn, overrules the first strategy, is known to maintain biodiversity, drive competition between bacterial strains, and preserve cooperation in social dilemmas. Here, we present a novel route to cyclic dominance in voluntary social dilemmas by adding to the traditional mix of cooperators, defectors and loners, a fourth player type, risk-averse hedgers, who enact tit-for-tat upon paying a hedging cost to avoid being exploited. When this cost is sufficiently small, cooperators, defectors and hedgers enter a loop of cyclic dominance that preserves cooperation even under the most adverse conditions. By contrast, when the hedging cost is large, hedgers disappear, consequently reverting to the traditional interplay of cooperators, defectors, and loners. In the interim region of hedging costs, complex evolutionary dynamics ensues, prompting transitions between states with two, three or four competing strategies. Our results thus reveal that voluntary participation is but one pathway to sustained cooperation via cyclic dominance.


Subject(s)
Cooperative Behavior , Game Theory , Biodiversity , Biological Evolution , Humans
5.
PLoS One ; 13(6): e0197932, 2018.
Article in English | MEDLINE | ID: mdl-29897924

ABSTRACT

Managing the disturbance of visitors due to crowding is an important management task in protected areas with high use levels. To achieve this, managers need to know how the use level affects the perceived disturbance due to crowding. Here we present a method to predict the level of disturbance as a function of use level measured by number of visitors. In contrast to the visual approach where subjects are asked to evaluate acceptability of use levels from manipulated images of scenery, our approach uses data gathered from actual experiences: actual (measured) use levels and concurrent on-site data on levels of disturbance experienced by visitors. Using the example of Nature Park Telascica, we show how these data can be acquired with limited resources (a smart-phone and short, time-stamped questionnaires), and demonstrate the subsequent analysis and model fitting. The resulting model estimates the probability that a visitor experiencing a given use level will report certain level of disturbance. We suggest a way of using the probability density functions to define an inherent limit of acceptable disturbance (LAD) due to crowding; the LAD can also be set to a desired value by management. Regardless of the definition, LAD can be used to determine the maximum acceptable use level as dictated by crowding considerations. The method gives predictions consistent with previous literature and can be used even when data are collected at low use levels.


Subject(s)
Conservation of Natural Resources , Crowding , Recreation , Humans , Models, Statistical , Perception , Surveys and Questionnaires
7.
Harmful Algae ; 51: 16-25, 2016 Jan.
Article in English | MEDLINE | ID: mdl-28003059

ABSTRACT

Frequency, severity, and geographic range of harmful blooms caused by a dinoflagellate Prorocentrum minimum have been increasing significantly over the past few decades. The ability to adapt nutrient quotas and carbon content to a wide range of environmental conditions is one of the key factors for the proliferation of P. minimum. Understanding the limits of stoichiometric variability in terms of nutrient quotas and carbon content would help explain the observed trends and assist in P. minimum growth model creation. This manuscript aggregates information from 15 studies to investigate variability in nutrient quotas and carbon content for a broad range of P. minimum isolates and clonal lines. Nitrogen quota, phosphorus quota, and carbon content in the studies varied between 11-107.5pgNcell-1, 1.45-17.58pgPcell-1, and 70-656.36pgCcell-1, respectively. Regression analysis was used to estimate average nitrogen and phosphorus quotas as functions of carbon, and to show that carbon content variability explains 55% of nitrogen and 23% of phosphorus quota variability. Confidence intervals for data (CID) found during the analysis were used to define maximal and minimal nutrient quotas as functions of carbon content. The ratios of the upper and lower CID ranges can, therefore, be used to estimate nutrient storage capacity as a function of carbon content. The new results and comparison with other species show that, at least for P. minimum, carbon-based quotas are more suitable for modelling than cell-based quotas. Finally, results indicate that environmental nutrient availability affects quotas more than light does: while quota variability due to light remains within 80% CID, nutrient variability covers the 95% CID.

8.
J Theor Biol ; 307: 96-103, 2012 Aug 21.
Article in English | MEDLINE | ID: mdl-22575971

ABSTRACT

A system of n competing logistical species of the Volterra type under proportional harvesting strategy is analyzed. In case of selective harvesting, when the effort is adjusted to each species, the optimum effort may result in the total maximum sustainable yield (TMSY(1)). When it exists, reaching TMSY(1) does not affect the system stability character, but it does affect the state, and hence some populations may reach too small a value to persist in nature. If competition is strong, species with smaller biotic potential may be driven to extinction. In case the system is harvested with a common harvesting effort, such as in trawler fishery, the total maximum sustainable yield (TMSY(2)) is smaller than TMSY(1), and all the species with lower or equal biotic potential to the optimum harvesting effort will be driven to extinction. In this case a call for implementation of the MSY is equivalent to a call for the extermination of some species and it runs directly against the Convention on Biological Diversity (CBD, 1992). Therefore, all legal documents advocating MSY in ecosystems starting with the Johannesburg Plan of Implementation (JPI, 2002) must be urgently retracted and replaced with adaptive management which will respect CBD.


Subject(s)
Biota , Competitive Behavior , Extinction, Biological , Population Dynamics
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