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1.
Front Plant Sci ; 11: 879, 2020.
Article in English | MEDLINE | ID: mdl-32714345

ABSTRACT

Growth retardation and stress-induced premature plant senescence are accompanied by a severe yield reduction and raise a major agro-economic concern. To improve biomass and yield in agricultural crops under mild stress conditions, the survival must be changed to productivity mode. Our previous successful attempts to delay premature senescence and growth inhibition under abiotic stress conditions by autoregulation of cytokinins (CKs) levels constitute a generic technology toward the development of highly productive plants. Since this technology is based on the induction of CKs synthesis during the age-dependent senescence phase by a senescence-specific promoter (SARK), which is not necessarily regulated by abiotic stress conditions, we developed autoregulating transgenic plants expressing the IPT gene specifically under abiotic stress conditions. The Arabidopsis promoter of the stress-induced metallothionein gene (AtMT) was isolated, fused to the IPT gene and transformed into tobacco plants. The MT:IPT transgenic tobacco plants displayed comparable elevated biomass productivity and maintained growth under drought conditions. To decipher the role and the molecular mechanisms of CKs in reverting the survival transcriptional program to a sustainable plant growth program, we performed gene expression analysis of candidate stress-related genes and found unexpectedly clear downregulation in the CK-overproducing plants. We also investigated kinase activity after applying exogenous CKs to tobacco cell suspensions that were grown in salinity stress. In-gel kinase activity analysis demonstrated CK-dependent deactivation of several stress-related kinases including two of the MAPK components, SIPK and WIPK and the NtOSAK, a member of SnRK2 kinase family, a key component of the ABA signaling cascade. A comprehensive phosphoproteomics analysis of tobacco cells, treated with exogenous CKs under salinity-stress conditions indicated that >50% of the identified phosphoproteins involved in stress responses were dephosphorylated by CKs. We hypothesize that upregulation of CK levels under stress conditions desensitize stress signaling cues through deactivation of kinases that are normally activated under stress conditions. CK-dependent desensitization of environmental stimuli is suggested to attenuate various pathways of the avoidance syndrome including the characteristic growth arrest and the premature senescence while allowing normal growth and metabolic maintenance.

2.
Plant Physiol ; 173(1): 376-389, 2017 01.
Article in English | MEDLINE | ID: mdl-27837090

ABSTRACT

ß-Carotene adds nutritious value and determines the color of many fruits, including melon (Cucumis melo). In melon mesocarp, ß-carotene accumulation is governed by the Orange gene (CmOr) golden single-nucleotide polymorphism (SNP) through a yet to be discovered mechanism. In Arabidopsis (Arabidopsis thaliana), OR increases carotenoid levels by posttranscriptionally regulating phytoene synthase (PSY). Here, we identified a CmOr nonsense mutation (Cmor-lowß) that lowered fruit ß-carotene levels with impaired chromoplast biogenesis. Cmor-lowß exerted a minimal effect on PSY transcripts but dramatically decreased PSY protein levels and enzymatic activity, leading to reduced carotenoid metabolic flux and accumulation. However, the golden SNP was discovered to not affect PSY protein levels and carotenoid metabolic flux in melon fruit, as shown by carotenoid and immunoblot analyses of selected melon genotypes and by using chemical pathway inhibitors. The high ß-carotene accumulation in golden SNP melons was found to be due to a reduced further metabolism of ß-carotene. This was revealed by genetic studies with double mutants including carotenoid isomerase (yofi), a carotenoid-isomerase nonsense mutant, which arrests the turnover of prolycopene. The yofi F2 segregants accumulated prolycopene independently of the golden SNP Moreover, Cmor-lowß was found to inhibit chromoplast formation and chloroplast disintegration in fruits from 30 d after anthesis until ripening, suggesting that CmOr regulates the chloroplast-to-chromoplast transition. Taken together, our results demonstrate that CmOr is required to achieve PSY protein levels to maintain carotenoid biosynthesis metabolic flux but that the mechanism of the CmOr golden SNP involves an inhibited metabolism downstream of ß-carotene to dramatically affect both carotenoid content and plastid fate.


Subject(s)
Carotenoids/metabolism , Cucumis melo/metabolism , Metabolic Flux Analysis , Plant Proteins/metabolism , Amino Acid Sequence , Biosynthetic Pathways/genetics , Chloroplasts/metabolism , Cucumis melo/genetics , Ecotype , Epistasis, Genetic , Ethyl Methanesulfonate , Fruit/genetics , Fruit/growth & development , Fruit/metabolism , Gene Expression Regulation, Plant , Genes, Plant , Genetic Variation , Genotype , Geranylgeranyl-Diphosphate Geranylgeranyltransferase/metabolism , Models, Biological , Mutation/genetics , Phenotype , Pigmentation/genetics , Plant Proteins/chemistry , Plant Proteins/genetics , Polymorphism, Single Nucleotide/genetics , RNA, Messenger/genetics , RNA, Messenger/metabolism
3.
BMC Plant Biol ; 15: 274, 2015 Nov 09.
Article in English | MEDLINE | ID: mdl-26553015

ABSTRACT

BACKGROUND: Melon fruit flesh color is primarily controlled by the "golden" single nucleotide polymorhism of the "Orange" gene, CmOr, which dominantly triggers the accumulation of the pro-vitamin A molecule, ß-carotene, in the fruit mesocarp. The mechanism by which CmOr operates is not fully understood. To identify cellular and metabolic processes associated with CmOr allelic variation, we compared the transcriptome of bulks of developing fruit of homozygous orange and green fruited F3 families derived from a cross between orange and green fruited parental lines. RESULTS: Pooling together F3 families that share same fruit flesh color and thus the same CmOr allelic variation, normalized traits unrelated to CmOr allelic variation. RNA sequencing analysis of these bulks enabled the identification of differentially expressed genes. These genes were clustered into functional groups. The relatively enriched functional groups were those involved in photosynthesis, RNA and protein regulation, and response to stress. CONCLUSIONS: The differentially expressed genes and the enriched processes identified here by bulk segregant RNA sequencing analysis are likely part of the regulatory network of CmOr. Our study demonstrates the resolution power of bulk segregant RNA sequencing in identifying genes related to commercially important traits and provides a useful tool for better understanding the mode of action of CmOr gene in the mediation of carotenoid accumulation.


Subject(s)
Cucumis melo/genetics , Gene Expression Profiling/methods , Gene Expression Regulation, Plant , Plant Proteins/genetics , Transcriptome , beta Carotene/metabolism , Cucumis melo/metabolism , Fruit/metabolism , Molecular Sequence Data , Plant Proteins/metabolism , Sequence Analysis, DNA
5.
Plant Mol Biol ; 82(6): 623-33, 2013 Aug.
Article in English | MEDLINE | ID: mdl-23595200

ABSTRACT

The plant senescence syndrome resembles, in many molecular and phenotypic aspects, plant responses to abiotic stresses. Both processes have an enormous negative global agro-economic impact and endanger food security worldwide. Premature plant senescence is the main cause of losses in grain filling and biomass yield due to leaf yellowing and deteriorated photosynthesis, and is also responsible for the losses resulting from the short shelf life of many vegetables and fruits. Under abiotic stress conditions the yield losses are often even greater. The primary challenge in agricultural sciences today is to develop technologies that will increase food production and sustainability of agriculture especially under environmentally limiting conditions. In this chapter, some of the mechanisms involved in abiotic stress-induced plant senescence are discussed. Recent studies have shown that crop yield and nutritional values can be altered as well as plant stress tolerance through manipulating the timing of senescence. It is often difficult to separate the effects of age-dependent senescence from stress-induced senescence since both share many biochemical processes and ultimately result in plant death. The focus of this review is on abiotic stress-induced senescence. Here, a number of the major approaches that have been developed to ameliorate some of the effects of abiotic stress-induced plant senescence are considered and discussed. Some approaches mimic the mechanisms already used by some plants and soil bacteria whereas others are based on development of new improved transgenic plants. While there may not be one simple strategy that can effectively decrease all losses of crop yield that accrue as a consequence of abiotic stress-induced plant senescence, some of the strategies that are discussed already show great promise.


Subject(s)
Plant Development , Stress, Physiological , Adaptation, Physiological , Droughts , Reactive Oxygen Species/metabolism , Signal Transduction
6.
CBE Life Sci Educ ; 11(4): 402-12, 2012.
Article in English | MEDLINE | ID: mdl-23222836

ABSTRACT

This study offers an innovative and sustainable instructional model for an introductory undergraduate course. The model was gradually implemented during 3 yr in a research university in a large-lecture biology course that enrolled biology majors and nonmajors. It gives priority to sources not used enough to enhance active learning in higher education: technology and the students themselves. Most of the lectures were replaced with continuous individual learning and 1-mo group learning of one topic, both supported by an interactive online tutorial. Assessment included open-ended complex questions requiring higher-order thinking skills that were added to the traditional multiple-choice (MC) exam. Analysis of students' outcomes indicates no significant difference among the three intervention versions in the MC questions of the exam, while students who took part in active-learning groups at the advanced version of the model had significantly higher scores in the more demanding open-ended questions compared with their counterparts. We believe that social-constructivist learning of one topic during 1 mo has significantly contributed to student deep learning across topics. It developed a biological discourse, which is more typical to advanced stages of learning biology, and changed the image of instructors from "knowledge transmitters" to "role model scientists."


Subject(s)
Biology/education , Peer Group , Problem-Based Learning , Students , Technology/education , Achievement , Biology/standards , Cognition , Humans
7.
J Exp Bot ; 61(4): 1111-23, 2010 Feb.
Article in English | MEDLINE | ID: mdl-20065117

ABSTRACT

The unique aroma of melons (Cucumis melo L., Cucurbitaceae) is composed of many volatile compounds biosynthetically derived from fatty acids, carotenoids, amino acids, and terpenes. Although amino acids are known precursors of aroma compounds in the plant kingdom, the initial steps in the catabolism of amino acids into aroma volatiles have received little attention. Incubation of melon fruit cubes with amino acids and alpha-keto acids led to the enhanced formation of aroma compounds bearing the side chain of the exogenous amino or keto acid supplied. Moreover, L-[(13)C(6)]phenylalanine was also incorporated into aromatic volatile compounds. Amino acid transaminase activities extracted from the flesh of mature melon fruits converted L-isoleucine, L-leucine, L-valine, L-methionine, or L-phenylalanine into their respective alpha-keto acids, utilizing alpha-ketoglutarate as the amine acceptor. Two novel genes were isolated and characterized (CmArAT1 and CmBCAT1) encoding 45.6 kDa and 42.7 kDa proteins, respectively, that displayed aromatic and branched-chain amino acid transaminase activities, respectively, when expressed in Escherichia coli. The expression of CmBCAT1 and CmArAT1 was low in vegetative tissues, but increased in flesh and rind tissues during fruit ripening. In addition, ripe fruits of climacteric aromatic cultivars generally showed high expression of CmBCAT1 and CmArAT1 in contrast to non-climacteric non-aromatic fruits. The results presented here indicate that in melon fruit tissues, the catabolism of amino acids into aroma volatiles can initiate through a transamination mechanism, rather than decarboxylation or direct aldehyde synthesis, as has been demonstrated in other plants.


Subject(s)
Amino Acids, Aromatic/biosynthesis , Amino Acids, Branched-Chain/biosynthesis , Cucumis melo/metabolism , Amino Acids, Aromatic/chemistry , Amino Acids, Branched-Chain/chemistry , Cucumis melo/chemistry , Cucumis melo/genetics , Gene Expression Regulation, Plant , Plant Proteins/genetics , Plant Proteins/metabolism , Volatilization
8.
J Proteomics ; 73(4): 709-20, 2010 Feb 10.
Article in English | MEDLINE | ID: mdl-19857612

ABSTRACT

We have studied the proteome of the model plant Arabidopsis thaliana infected with a necrotrophic fungal pathogen, Alternaria brassicicola. The Arabidopsis-A. brassicicola host-pathogen pair is being developed as a model genetic system for incompatible plant-fungal interactions, in which the spread of disease is limited by plant defense responses. After confirming that a defense response was induced at the transcriptional level, we identified proteins whose abundance on 2-DE gels increased or decreased in infected leaves. At least 11 protein spots showed reproducible differences in abundance, increasing or decreasing during the progress of the infection. The pathogenesis-related protein PR4, a glycosyl hydrolase, and the antifungal protein osmotin are strongly up-regulated. Two members of the Arabidopsis glutathione S-transferase (GST) family increased in abundance in infected leaves. The spots in which these GST proteins were identified contain additional members of the GST family. Representation of GST family members in several protein spots migrating at similar molecular weight suggests post-translational modifications. The signature of GST regulation may be specific for the type of plant-pathogen interaction. The proteomic view of the defense response to A. brassicicola can be compared with other types of plant-pathogen interactions, and to leaf senescence, identifying unique regulatory patterns.


Subject(s)
Alternaria/physiology , Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Arabidopsis/microbiology , Plant Diseases/microbiology , Proteomics , Alternaria/genetics , Alternaria/growth & development , Alternaria/pathogenicity , Antifungal Agents/metabolism , Arabidopsis/genetics , Arabidopsis Proteins/genetics , Arabidopsis Proteins/isolation & purification , Electrophoresis, Gel, Two-Dimensional , Gene Expression Regulation, Plant , Glutathione Transferase/metabolism , Glycoside Hydrolases/metabolism , Host-Pathogen Interactions/genetics , Host-Pathogen Interactions/physiology , Mass Spectrometry , Plant Diseases/genetics , Plant Leaves/genetics , Plant Leaves/metabolism , Plant Leaves/microbiology , Protein Processing, Post-Translational/genetics , Protein Processing, Post-Translational/physiology , Reverse Transcriptase Polymerase Chain Reaction
9.
BMC Plant Biol ; 9: 31, 2009 Mar 18.
Article in English | MEDLINE | ID: mdl-19296849

ABSTRACT

BACKGROUND: The interaction of Arabidopsis with Alternaria brassicicola provides a model for disease caused by necrotrophs, but a drawback has been the lack of a compatible pathosystem. Infection of most ecotypes, including the widely-studied line Col-0, with this pathogen generally leads to a lesion that does not expand beyond the inoculated area. This study examines an ecotype, Dijon G (DiG), which is considered sensitive to A. brassicicola. RESULTS: We show that the interaction has the characteristics of a compatible one, with expanding rather than limited lesions. To ask whether DiG is merely more sensitive to the pathogen or, rather, interacts in distinct manner, we identified genes whose regulation differs between Col-0 and DiG challenged with A. brassicicola. Suppression subtractive hybridization was used to identify differentially expressed genes, and their expression was verified using semi-quantitative PCR. We also tested a set of known defense-related genes for differential regulation in the two plant-pathogen interactions. Several known pathogenesis-related (PR) genes are up-regulated in both interactions. PR1, and a monooxygenase gene identified in this study, MO1, are preferentially up-regulated in the compatible interaction. In contrast, GLIP1, which encodes a secreted lipase, and DIOX1, a pathogen-response related dioxygenase, are preferentially up-regulated in the incompatible interaction. CONCLUSION: The results show that DiG is not only more susceptible, but demonstrate that its interaction with A. brassicicola has a specific transcriptional signature.


Subject(s)
Alternaria/pathogenicity , Arabidopsis Proteins/metabolism , Arabidopsis/genetics , Arabidopsis/microbiology , Plant Diseases/genetics , Arabidopsis/metabolism , Arabidopsis Proteins/genetics , Gene Expression Profiling , Gene Expression Regulation, Plant , Genes, Plant , Genetic Markers , Genotype , RNA, Plant/genetics
10.
Plant Mol Biol ; 66(6): 647-61, 2008 Apr.
Article in English | MEDLINE | ID: mdl-18264780

ABSTRACT

A combined chemical, biochemical and molecular study was conducted to understand the differential accumulation of volatile sesquiterpenes in melon fruits. Sesquiterpenes were present mainly in the rinds of climacteric varieties, and a great diversity in their composition was found among varieties. Sesquiterpenes were generally absent in non-climacteric varieties. Two climacteric melon varieties, the green-fleshed 'Noy Yizre'el', and the orange-fleshed 'Dulce' were further examined. In 'Noy Yizre'el' the main sesquiterpenes accumulated are delta-cadinene, gamma-cadinene and alpha-copaene, while alpha-farnesene is the main sesquiterpene in 'Dulce'. Sesquiterpene synthase activities, mainly restricted to rinds of mature fruits, were shown to generate different sesquiterpenes in each variety according to the compositions found in rinds. EST melon database mining yielded two novel cDNAs coding for members of the Tps gene family termed CmTpsNY and CmTpsDul respectively, that are 43.2% similar. Heterologous expression in E. coli of CmTpsNY produced mainly delta-copaene, alpha-copaene, beta-caryophyllene, germacrene D, alpha-muurolene, gamma-cadinene, delta-cadinene, and alpha-cadinene, while CmTpsDul produced alpha-farnesene only. CmTpsNY was mostly expressed in 'Noy Yizre'el' rind while CmTpsDul expression was specific to 'Dulce' rind. None of these genes was expressed in rinds of the non-climacteric 'Tam Dew' cultivar. Our results indicate that different sesquiterpene synthases encoded by different members of the Tps gene family are active in melon varieties and this specificity modulates the accumulation of sesquiterpenes. The genes are differentially transcriptionally regulated during fruit development and according to variety and are likely to be associated with chemical differences responsible for the unique aromas of melon varieties.


Subject(s)
Carbon-Carbon Lyases/metabolism , Cucumis melo/metabolism , Plant Proteins/metabolism , Sesquiterpenes/metabolism , Amino Acid Sequence , Blotting, Northern , Carbon-Carbon Lyases/classification , Carbon-Carbon Lyases/genetics , Cloning, Molecular , Cucumis melo/enzymology , Cucumis melo/genetics , Gas Chromatography-Mass Spectrometry , Gene Expression Regulation, Enzymologic , Gene Expression Regulation, Plant , Molecular Sequence Data , Molecular Structure , Phylogeny , Plant Proteins/genetics , Polycyclic Sesquiterpenes , Polymerase Chain Reaction , Recombinant Proteins/metabolism , Sequence Homology, Amino Acid , Sesquiterpenes/chemistry , Solid Phase Microextraction , Species Specificity
11.
Proc Natl Acad Sci U S A ; 104(49): 19631-6, 2007 Dec 04.
Article in English | MEDLINE | ID: mdl-18048328

ABSTRACT

Drought, the most prominent threat to agricultural production worldwide, accelerates leaf senescence, leading to a decrease in canopy size, loss in photosynthesis and reduced yields. On the basis of the assumption that senescence is a type of cell death program that could be inappropriately activated during drought, we hypothesized that it may be possible to enhance drought tolerance by delaying drought-induced leaf senescence. We generated transgenic plants expressing an isopentenyltransferase gene driven by a stress- and maturation-induced promoter. Remarkably, the suppression of drought-induced leaf senescence resulted in outstanding drought tolerance as shown by, among other responses, vigorous growth after a long drought period that killed the control plants. The transgenic plants maintained high water contents and retained photosynthetic activity (albeit at a reduced level) during the drought. Moreover, the transgenic plants displayed minimal yield loss when watered with only 30% of the amount of water used under control conditions. The production of drought-tolerant crops able to grow under restricted water regimes without diminution of yield would minimize drought-related losses and ensure food production in water-limited lands.


Subject(s)
Disasters , Nicotiana/growth & development , Plant Leaves/growth & development , Plants, Genetically Modified/growth & development , Water/metabolism , Agrobacterium tumefaciens/genetics , Alkyl and Aryl Transferases/genetics , Bacterial Proteins/genetics , Cytokinins/metabolism , Flowers , Hydrogen Peroxide/metabolism , Oxidation-Reduction , Plant Leaves/genetics , Plants, Genetically Modified/genetics , Protein Serine-Threonine Kinases/genetics , Receptors, Cell Surface/genetics , Nicotiana/genetics
12.
Methods Mol Biol ; 371: 289-305, 2007.
Article in English | MEDLINE | ID: mdl-17634589

ABSTRACT

Molecular and cellular processes related to the senescence syndrome are determined by programs of differential gene expression. Subtractive cDNA hybridization is a powerful approach to identify and isolate differentially expressed genes in various systems. A highly effective method, termed suppression subtractive hybridization (SSH), has been applied for the generation of subtracted cDNA library of senescing leaves. The method consists of two main stages, the normalization step that equalizes the abundance of cDNAs within the target population and the subtraction step that eliminates the common sequences between the target and the driver populations. The successful generation of library containing high numbered of rare and abundant cDNA clones in senescing plant cells proves the applicability of this method for global identification of differentially expressed genes during cellular senescence.


Subject(s)
Cellular Senescence/genetics , Cloning, Molecular , Gene Library , Plant Physiological Phenomena , Plants/genetics , Nucleic Acid Hybridization
13.
Plant Physiol ; 140(2): 603-12, 2006 Feb.
Article in English | MEDLINE | ID: mdl-16384904

ABSTRACT

Water deficit caused by addition of polyethylene glycol 6000 at -0.5 MPa water potential to well-aerated nutrient solution for 48 h inhibited the elongation of maize (Zea mays) seedling primary roots. Segmental growth rates in the root elongation zone were maintained 0 to 3 mm behind the tip, but in comparison with well-watered control roots, progressive growth inhibition was initiated by water deficit as expanding cells crossed the region 3 to 9 mm behind the tip. The mechanical extensibility of the cell walls was also progressively inhibited. We investigated the possible involvement in root growth inhibition by water deficit of alterations in metabolism and accumulation of wall-linked phenolic substances. Water deficit increased expression in the root elongation zone of transcripts of two genes involved in lignin biosynthesis, cinnamoyl-CoA reductase 1 and 2, after only 1 h, i.e. before decreases in wall extensibility. Further increases in transcript expression and increased lignin staining were detected after 48 h. Progressive stress-induced increases in wall-linked phenolics at 3 to 6 and 6 to 9 mm behind the root tip were detected by comparing Fourier transform infrared spectra and UV-fluorescence images of isolated cell walls from water deficit and control roots. Increased UV fluorescence and lignin staining colocated to vascular tissues in the stele. Longitudinal bisection of the elongation zone resulted in inward curvature, suggesting that inner, stelar tissues were also rate limiting for root growth. We suggest that spatially localized changes in wall-phenolic metabolism are involved in the progressive inhibition of wall extensibility and root growth and may facilitate root acclimation to drying environments.


Subject(s)
Cell Wall/physiology , Lignin/metabolism , Phenols/metabolism , Water/metabolism , Zea mays/growth & development , Blotting, Northern , Cell Wall/drug effects , Cell Wall/ultrastructure , Microscopy, Fluorescence , Plant Proteins/metabolism , Plant Roots/cytology , Plant Roots/drug effects , Plant Roots/growth & development , Polyethylene Glycols/pharmacology , Reverse Transcriptase Polymerase Chain Reaction , Spectroscopy, Fourier Transform Infrared , Zea mays/cytology , Zea mays/metabolism
14.
J Biotechnol ; 121(3): 346-50, 2006 Feb 10.
Article in English | MEDLINE | ID: mdl-16183160

ABSTRACT

Phytopathogenic fungi penetrate plants by breaking down the cuticular barrier with cutinase. Cutinases are extracellular hydrolytic enzymes that degrade cutin, a polyester composed of hydroxy and epoxy fatty acids. Until now, cutinase has been recognized by its ability to release labeled cutin monomers or by a non-specific esterase assay based on the hydrolysis of p-nitrophenyl esters of short fatty acids. In this work, an insoluble p-nitrophenyl derivative was synthesized and purified, and its structure was determined to be 4-nitrophenyl (16-methyl sulfone ester) hexadecanoate (pNMSEH) by nuclear magnetic resonance (H+ NMR) analysis. pNMSEH was tested as a new cutinase substrate with Pseudomonas mandocino cutinase and porcine liver esterase. While a linear release over time of p-nitrophenol (pNP) was recorded in the presence of cutinase, no response was obtained with the esterase. The calculated kinetic parameters of pNMSEH hydrolysis by cutinase revealed a high specificity (Km=1.8mM), albeit a low catalytic rate (Vmax=10.5 micromol min(-l)l(-1)). This new synthetic substrate may be helpful for detecting and assaying cutinase activity in mixed solutions, such as crude fungal extracellular extracts.


Subject(s)
Carboxylic Ester Hydrolases/chemistry , Carboxylic Ester Hydrolases/chemical synthesis , Palmitates/chemistry , Sulfones/chemistry , Sulfones/chemical synthesis , Animals , Catalysis , Chromatography, High Pressure Liquid , Dimethyl Sulfoxide , Esters , Kinetics , Liver/enzymology , Magnetic Resonance Spectroscopy , Molecular Structure , Pseudomonas mendocina/enzymology , Substrate Specificity , Sulfones/isolation & purification , Swine
15.
Transgenic Res ; 14(3): 227-36, 2005 Jun.
Article in English | MEDLINE | ID: mdl-16145831

ABSTRACT

Parasitic plants present some of the most intractable weed problems for agriculture in much of the world. Species of root parasites such as Orobanche can cause enormous yield losses, yet few control measures are effective and affordable. An ideal solution to this problem is the development of parasite-resistant crops, but this goal has been elusive for most susceptible crops. Here we report a mechanism for resistance to the parasitic angiosperm Orobanche based on expression of sarcotoxin IA in transgenic tobacco. Sarcotoxin IA is a 40-residue peptide with antibiotic activity, originally isolated from the fly, Sarcophaga peregrina. The sarcotoxin IA gene was fused to an Orobanche-inducible promoter, HMG2, which is induced locally in the host root at the point of contact with the parasite, and used to transform tobacco. The resulting transgenic plants accumulated more biomass than non-transformed plants in the presence of parasites. Furthermore, plants expressing sarcotoxin IA showed enhanced resistance to O. aegyptiaca as evidenced by abnormal parasite development and higher parasite mortality after attachment as compared to non-transformed plants. The transgenic plants were similar in appearance to non-transformed plants suggesting that sarcotoxin IA is not detrimental to the host.


Subject(s)
Insect Proteins/genetics , Nicotiana/genetics , Orobanche/physiology , Plant Diseases , Animals , Diptera/genetics , HMGB2 Protein/genetics , Insect Proteins/metabolism , Plants, Genetically Modified , Promoter Regions, Genetic , Nicotiana/metabolism , Transfection
16.
J Exp Bot ; 56(412): 695-702, 2005 Feb.
Article in English | MEDLINE | ID: mdl-15611144

ABSTRACT

The process of leaf senescence is biochemically characterized by the transition from nutrient assimilation to nutrient remobilization. The nutrient drain by developing vegetative and reproductive structures has been implicated in senescence induction. The steady-state levels of amino acids in senescing leaves are dependent on the rate of their release during protein degradation and on the rate of efflux into growing structures. To determine the possible regulatory role of amino acid content in leaf senescence, an in planta non-destructive, semi-quantitative method for the analysis of endogenous levels of free amino acids has been developed. The method is based on in vivo bioluminescence of amino acid-requiring strains of recombinant Escherichia coli carrying the lux gene. The luminescence signal was found to be proportional to the levels of added exogenous tryptophan and to the free amino acid levels in the plant tissues analysed. During the senescence of tobacco flowers and of detached leaves of oats and Arabidopsis, a progressive increase in the levels of free amino acids was monitored. By contrast to the detached leaves, the attached oat leaves displayed a decrease in the levels of free amino acids during senescence. In Arabidopsis, both the attached and detached leaves exhibited a similar pattern of gradual increase in amino acid content during senescence. The differences between the sink-source balance of the two species and the possible relationships between amino acid content and leaf senescence are discussed.


Subject(s)
Amino Acids/metabolism , Arabidopsis/physiology , Avena/physiology , Plant Leaves/physiology , Amino Acids/physiology , Escherichia coli/genetics , Luminescent Proteins/metabolism , Organisms, Genetically Modified , Plant Leaves/growth & development , Plant Leaves/metabolism , Recombinant Proteins/metabolism , Time Factors , Nicotiana/physiology , Tryptophan/physiology
17.
Plant Mol Biol ; 56(3): 367-80, 2004 Oct.
Article in English | MEDLINE | ID: mdl-15604750

ABSTRACT

Growth in the apical elongation zone of plant roots is central to the development of functional root systems. Rates of root segmental elongation change from accelerating to decelerating as cell development proceeds from newly formed to fully elongated status. One of the primary variables regulating these changes in elongation rates is the extensibility of the elongating cell walls. To help decipher the complex molecular mechanisms involved in spatially variable root growth, we performed a gene identification study along primary root tips of maize (Zea mays) seedlings using suppression subtractive hybridization (SSH) and candidate gene approaches. Using SSH we isolated 150 non-redundant cDNA clones representing root growth-related genes (RGGs) that were preferentially expressed in the elongation zone. Differential expression patterns were revealed by Northern blot analysis for 41 of the identified genes and several candidate genes. Many of the genes have not been previously reported to be involved in root growth processes in maize. Genes were classified into groups based on the predicted function of the encoded proteins: cell wall metabolism, cytoskeleton, general metabolism, signaling and unknown. In-situ hybridization performed for two selected genes, confirmed the spatial distribution of expression shown by Northern blots and revealed subtle differences in tissue localization. Interestingly, spatial profiles of expression for some cell wall related genes appeared to correlate with the profile of accelerating root elongation and changed appropriately under growth-inhibitory water deficit.


Subject(s)
Gene Expression Profiling , Plant Roots/genetics , Zea mays/genetics , DNA, Complementary/chemistry , DNA, Complementary/genetics , Expressed Sequence Tags , Gene Expression Regulation, Developmental/drug effects , Gene Expression Regulation, Plant/drug effects , In Situ Hybridization , Plant Proteins/genetics , Plant Roots/growth & development , RNA, Plant/genetics , RNA, Plant/metabolism , Sequence Analysis, DNA , Water/pharmacology , Zea mays/growth & development
18.
Genome Biol ; 5(3): 212, 2004.
Article in English | MEDLINE | ID: mdl-15003110

ABSTRACT

A recent, genome-wide study shows that the transcriptional program underlying leaf senescence is active and complex, reflecting the activation of more than 2,000 genes in Arabidopsis, with gene products involved in a broad spectrum of regulatory, biochemical and cellular events.


Subject(s)
Aging/genetics , Genes, Plant/physiology , Plant Leaves/genetics , Animals
19.
J Biotechnol ; 107(3): 265-73, 2004 Feb 05.
Article in English | MEDLINE | ID: mdl-14736462

ABSTRACT

Cellulose-binding domains (CBDs) are characterized by their ability to strongly bind to different forms of cellulose. This study examined the use of a recombinant CBD fused to the reporter enzyme beta-glucuronidase (CBD-GUS) to determine the extent of removal of the water-repellent waxy component of cotton fiber cuticles following hydrolytic treatment, i.e., scouring. The CBD-GUS test displayed higher sensitivity and repeatability than conventional water absorb techniques applied in the textile industry. Increases in the levels of CBD-GUS bound to the exposed cellulose correlated to increases in the fabric's hydrophilicity as a function of the severity of the scouring treatment applied, clearly indicating that the amount of bound enzyme increases proportionally with the amount of available binding sites. The binding of CBD-GUS also gave measurable and repeatable results when used on untreated or raw fabrics in comparison with conventional water drop techniques. The quantitative response of the reaction as bound enzyme activity was optimized for fully wettable fabrics. A minimal free enzyme concentration-to-swatch weight ratio of 75:1 was found to be necessary to ensure enzyme saturation (i.e., a linear response), corresponding to a free enzyme-to-bound enzyme ratio of at least 3:5.


Subject(s)
Carboxylic Ester Hydrolases/metabolism , Cotton Fiber/methods , Glucuronidase/metabolism , Artificial Gene Fusion , Carboxylic Ester Hydrolases/genetics , Cellulose/metabolism , Chromogenic Compounds/analysis , Escherichia coli/genetics , Genetic Vectors , Glucuronidase/genetics , Polysaccharide-Lyases , Protein Binding , Protein Structure, Tertiary/genetics , Pseudomonas/genetics , Recombinant Proteins/genetics , Recombinant Proteins/metabolism
20.
Appl Environ Microbiol ; 69(11): 6500-6, 2003 Nov.
Article in English | MEDLINE | ID: mdl-14602606

ABSTRACT

We studied oxidative stress in lignin peroxidase (LIP)-producing cultures (cultures flushed with pure O(2)) of Phanerochaete chrysosporium by comparing levels of reactive oxygen species (ROS), cumulative oxidative damage, and antioxidant enzymes with those found in non-LIP-producing cultures (cultures grown with free exchange of atmospheric air [control cultures]). A significant increase in the intracellular peroxide concentration and the degree of oxidative damage to macromolecules, e.g., DNA, lipids, and proteins, was observed when the fungus was exposed to pure O(2) gas. The specific activities of manganese superoxide dismutase, catalase, glutathione reductase, and glutathione peroxidase and the consumption of glutathione were all higher in cultures exposed to pure O(2) (oxygenated cultures) than in cultures grown with atmospheric air. Significantly higher gene expression of the LIP-H2 isozyme occurred in the oxygenated cultures. A hydroxyl radical scavenger, dimethyl sulfoxide (50 mM), added to the culture every 12 h, completely abolished LIP expression at the mRNA and protein levels. This effect was confirmed by in situ generation of hydroxyl radicals via the Fenton reaction, which significantly enhanced LIP expression. The level of intracellular cyclic AMP (cAMP) was correlated with the starvation conditions regardless of the oxygenation regimen applied, and similar cAMP levels were obtained at high O(2) concentrations and in cultures grown with atmospheric air. These results suggest that even though cAMP is a prerequisite for LIP expression, high levels of ROS, preferentially hydroxyl radicals, are required to trigger LIP synthesis. Thus, the induction of LIP expression by O(2) is at least partially mediated by the intracellular ROS.


Subject(s)
Oxidative Stress , Oxygen/pharmacology , Peroxidases/biosynthesis , Phanerochaete/drug effects , Phanerochaete/enzymology , Reactive Oxygen Species/metabolism , Culture Media , Cyclic AMP/metabolism , Enzyme Induction , Gene Expression Regulation, Fungal , Peroxidases/genetics , Phanerochaete/growth & development , Phanerochaete/physiology , Transcription, Genetic
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