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1.
Nature ; 627(8002): 130-136, 2024 Mar.
Article in English | MEDLINE | ID: mdl-38355793

ABSTRACT

Genomic instability arising from defective responses to DNA damage1 or mitotic chromosomal imbalances2 can lead to the sequestration of DNA in aberrant extranuclear structures called micronuclei (MN). Although MN are a hallmark of ageing and diseases associated with genomic instability, the catalogue of genetic players that regulate the generation of MN remains to be determined. Here we analyse 997 mouse mutant lines, revealing 145 genes whose loss significantly increases (n = 71) or decreases (n = 74) MN formation, including many genes whose orthologues are linked to human disease. We found that mice null for Dscc1, which showed the most significant increase in MN, also displayed a range of phenotypes characteristic of patients with cohesinopathy disorders. After validating the DSCC1-associated MN instability phenotype in human cells, we used genome-wide CRISPR-Cas9 screening to define synthetic lethal and synthetic rescue interactors. We found that the loss of SIRT1 can rescue phenotypes associated with DSCC1 loss in a manner paralleling restoration of protein acetylation of SMC3. Our study reveals factors involved in maintaining genomic stability and shows how this information can be used to identify mechanisms that are relevant to human disease biology1.


Subject(s)
Genomic Instability , Micronuclei, Chromosome-Defective , Animals , Humans , Mice , Chromosomes/genetics , DNA Damage , Genomic Instability/genetics , Phenotype , Sirtuin 1 , Synthetic Lethal Mutations
2.
J Anat ; 223(6): 603-9, 2013 Dec.
Article in English | MEDLINE | ID: mdl-24205910

ABSTRACT

The arteries of the skin have been postulated to form a profound plexus at the dermal/hypodermal junction and a superficial plexus in the papillary dermis. Our article aims to rebut this concept and to provide an alternative description of the arrangement of the dermal arteries. Employing a novel technique, we produced digital volume data (volume size: 2739 × 2054 × 3000 µm(3) ; voxel size: 1.07 × 1.07 × 2 µm(3) ) from biopsies of the skin of the thumb pads of 15 body donors. Utilizing these data, we analysed the arrangement of the dermal arteries with the aid of virtual re-sectioning tools, and, in three specimens, with high-quality three-dimensional (3D) surface models. In all specimens we observed a tree-like ramification of discrete dermal arteries. The terminal branches of the arterial trees gave rise to the ascending segments of the capillary loops of the dermal papillae. None of the specimens showed a superficial arterial plexus. This suggests that the skin of the human thumb pad can be split in discrete 'arterial units'. Each unit represents the zone of the papillary dermis and epidermal/dermal junction, to which blood is supplied exclusively by the branches of a single dermal artery. The concept of dermal arterial units is in contrast to all existing descriptions of the architecture of the dermal arteries. However, whether it can be transferred to the skin of other body parts, remains to be tested. Likewise, the consequences of arterial units for understanding the mechanisms of wound healing and the appearance and genesis of skin diseases remain to be examined.


Subject(s)
Adipose Tissue/blood supply , Thumb/blood supply , Aged , Aged, 80 and over , Arteries/anatomy & histology , Cadaver , Female , Humans , Image Processing, Computer-Assisted , Imaging, Three-Dimensional , Male , Middle Aged
3.
Anat Histol Embryol ; 42(3): 191-200, 2013 Jun.
Article in English | MEDLINE | ID: mdl-22971166

ABSTRACT

Cephalothoracopagus embryos are conjoined twins, who share parts of their heads, necks and bodies. Our study aims at presenting a detailed morphological analysis of a cephalothoracopagus chick embryo of developmental stage 31. Because none of the existing theories can explain the genesis of the phenotype of this embryo, we also suggest a hypothesis, which explains it. Beside the cephalothoracopagus embryo, we investigated five control embryos. With the aid of the high-resolution episcopic microscopy (HREM) technique, we created digital volume data and three-dimensional (3D) computer models of the organs and arteries of the embryos. We used the 3D models for topological analysis and for measuring the diameters of the great intrathoracic arteries. The malformed embryo showed two body backs, each containing a notochord, spinal cord and dorsal aorta. The body backs continued into separated lower bodies. The embryo had a single, four-chambered heart, single respiratory tract and single upper alimentary tract. The topology of the pharyngeal arch arteries was normal, and the diameters of these arteries were similar to that of the control embryos. We classified the embryo we investigated as a yet unknown malformation and suggest a hypothesis explaining its genesis.


Subject(s)
Chick Embryo/abnormalities , Animals , Cardiovascular Abnormalities/embryology , Cardiovascular Abnormalities/pathology , Cardiovascular Abnormalities/veterinary , Computer Simulation , Imaging, Three-Dimensional/methods , Microscopy, Acoustic/methods , Models, Anatomic , Twins, Conjoined/embryology , Twins, Conjoined/pathology
4.
Cell Death Differ ; 19(1): 121-31, 2012 Jan.
Article in English | MEDLINE | ID: mdl-21637294

ABSTRACT

Skeletal myogenesis is precisely regulated by multiple transcription factors. Previously, we demonstrated that enhancer of polycomb 1 (Epc1) induces skeletal muscle differentiation by potentiating serum response factor (SRF)-dependent muscle gene activation. Here, we report that an interacting partner of Epc1, ret finger protein (RFP), blocks skeletal muscle differentiation. Our findings show that RFP was highly expressed in skeletal muscles and was downregulated during myoblast differentiation. Forced expression of RFP delayed myoblast differentiation, whereas knockdown enhanced it. Epc1-induced enhancements of SRF-dependent multinucleation, transactivation of the skeletal α-actin promoter, binding of SRF to the serum response element, and muscle-specific gene induction were blocked by RFP. RFP interfered with the physical interaction between Epc1 and SRF. Muscles from rfp knockout mice (Rfp(-/-)) mice were bigger than those from wild-type mice, and the expression of SRF-dependent muscle-specific genes was upregulated. Myotube formation and myoblast differentiation were enhanced in Rfp(-/-) mice. Taken together, our findings highlight RFP as a novel regulator of muscle differentiation that acts by modulating the expression of SRF-dependent skeletal muscle-specific genes.


Subject(s)
DNA-Binding Proteins/metabolism , Muscle Cells/metabolism , Muscle Development/genetics , Nuclear Proteins/metabolism , Repressor Proteins/metabolism , Serum Response Factor/metabolism , Actins/genetics , Actins/metabolism , Animals , Binding Sites , Cell Differentiation , Cell Line , DNA-Binding Proteins/genetics , Gene Expression Regulation, Developmental , Mice , Mice, Knockout , Muscle Cells/cytology , Muscle Fibers, Skeletal/cytology , Muscle Fibers, Skeletal/metabolism , Myoblasts/cytology , Myoblasts/metabolism , Nuclear Proteins/genetics , Promoter Regions, Genetic , Repressor Proteins/genetics , Serum Response Factor/genetics , Transcription Factors , Transcriptional Activation , Ubiquitin-Protein Ligases
5.
J Microsc ; 234(2): 173-90, 2009 May.
Article in English | MEDLINE | ID: mdl-19397746

ABSTRACT

The great arteries of embryos are small channels of a complex three-dimensional arrangement. Measurements of their diameters, as required for understanding cardiovascular morphogenesis and the genesis of malformations, cannot be performed in two-dimensional histological sections. We present and evaluate a quick and simple method for performing highly significant and objective measurements of the diameters of blood vessels in vertebrate embryos and used this method for providing statistics of the diameter of the semi-lunar valves and the lumina of the great arteries of early chick and mouse foetus. We employed the high-resolution episcopic microscopy technique for generating volume data and three-dimensional computer models of the arterial trees of 30 chick embryos (Hamburger Hamilton stage 34), 30 mouse embryos of the OF1 strain harvested on 14.5 dpc, 30 embryos of the OF1 strain harvested on 15.5 dpc and 28 mouse embryos of the PARKES strain harvested on 14.5 dpc. The three-dimensional models (voxel size 2 mum x 2 mum x 2 mum and 3 mum x 3 mum x 3 mum) were used for defining virtual resection planes perpendicular to the longitudinal axis of the blood vessels at comparable positions. In these planes, we measured the lumen areas and the lumen perimeters. We also calculated the lumen diameter and the true lumen area from the perimeter and present statistical analysis. Finally, we evaluate and discuss the reliability and reproducibility of our method and present all measurements in a form that minimizes the influence of specimen size variation, specimen processing and data generation methods.


Subject(s)
Aorta/embryology , Aortic Valve/embryology , Embryo, Mammalian/blood supply , Embryo, Nonmammalian/blood supply , Pulmonary Artery/embryology , Animals , Aorta/ultrastructure , Aortic Valve/ultrastructure , Biometry/methods , Chick Embryo , Image Processing, Computer-Assisted/methods , Mice , Microscopy/methods , Models, Cardiovascular , Pulmonary Artery/ultrastructure , Pulmonary Valve/embryology , Pulmonary Valve/ultrastructure , Reproducibility of Results , Statistics, Nonparametric
6.
Radiologe ; 43(12): 1036-44, 2003 Dec.
Article in German | MEDLINE | ID: mdl-14668991

ABSTRACT

Morphogenesis of most thoracic organs and structures is not finished with birth but perpetuates in postnatal life. The postnatal growth is partly associated with enormous changes in structure, morphology, and function. Our study presents an overview of morphological, topological and functional peculiarities of thoracic anatomy during infancy, childhood and adolescence. It focuses on the development of the mammary gland, osseous structures of the chest wall, thymus, heart, and lungs. Most of the presented data are based on post-mortem studies. Measurements and numerical data are mainly included for illustration of growth-associated changes.


Subject(s)
Image Processing, Computer-Assisted , Imaging, Three-Dimensional , Radiography, Thoracic , Thorax/growth & development , Adolescent , Age Factors , Child , Child, Preschool , Female , Gestational Age , Humans , Infant , Infant, Newborn , Male , Pregnancy , Reference Values , Thorax/embryology
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