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1.
Med Phys ; 45(11): 4927-4941, 2018 Nov.
Article in English | MEDLINE | ID: mdl-30193407

ABSTRACT

PURPOSE: Turbid (powder or columnar-structured) scintillators are widely used in indirect flat panel detectors (I-FPDs) for scientific, industrial, and medical radiography. Light diffusion and absorption within these scintillators is expected to cause depth-dependent variations in their x ray conversion gain and spatial blur. These variations degrade the detective quantum efficiency of I-FPDs at all spatial frequencies. Despite their importance, there are currently no established methods for directly measuring scintillator depth effects. This work develops the instrumentation and methods to achieve this capability. METHODS: An ultra-high-sensitivity camera was assembled for imaging single x ray interactions in two commercial Gd2 O2 S:Tb (GOS) screens (Lanex Regular and Fast Back, Eastman Kodak Company). X ray interactions were localized to known depths in the screens using a slit beam of parallel synchrotron radiation (32 keV), with beam width (~20 µm) much narrower than the screen thickness. Depth-localized x ray interaction images were acquired in 30 µm depth-intervals, and analyzed to measure each scintillator's depth-dependent average gain g ¯ ( z ) and modulation transfer function MTF(z,f). These measurements were used to calculate each screen's expected MTF(f) in an energy-integrating detector (e.g., I-FPD). Calculations were compared to presampling MTF measurements made by coupling each screen to a high-resolution CMOS image sensor (48 µm pixel) and using the slanted-edge method. RESULTS: Both g ¯ ( z ) and MTF(z,f) continuously increased as interactions occurred closer to each screen's sensor-coupled surface. The Regular yielded 1351 ± 66 and 2117 ± 54 photons per absorbed x ray (42-66 keV-1 ) in interactions occurring furthest from and nearest to the image sensor, while the Fast Back yielded 833 ± 22 and 1910 ± 39 photons (26-60 keV-1 ). At f = 1 mm-1 , MTF(z,f) varied between 0.63 and 0.78 in the Regular and 0.30-0.76 in the Fast Back. Calculations of presampling MTF(f) using g ¯ ( z ) and MTF(z,f) showed excellent agreement with slanted-edge measurements. CONCLUSIONS: The developed instrument and method enable direct measurements of the depth-dependent gain and spatial resolution of turbid scintillators. This knowledge can be used to predict, understand, and potentially improve I-FPD imaging performance.


Subject(s)
Scintillation Counting/instrumentation , Calibration , Equipment Design
2.
Sci Rep ; 8(1): 10484, 2018 Jul 11.
Article in English | MEDLINE | ID: mdl-29992974

ABSTRACT

We analyze the dynamics of squeezing in a ballistic quantum wire with Rashba spin-orbit interaction in the presence of both strong and weak magnetic fields and for different initial states of the system. Compared to the more standard measure of squeezing based on variances, we show that entropy squeezing is a more sensitive measure. Our results show that there is a strong relationship between the spin-orbit interaction and the strength of entropy squeezing. Furthermore, there is a relationship between the initial state and the number of squeezed components. This allows new knobs to control the strength and the component of entropy squeezing in a nanowire system.

3.
Sci Rep ; 7(1): 9401, 2017 08 24.
Article in English | MEDLINE | ID: mdl-28839173

ABSTRACT

Solar cells based on hybrid perovskites have shown high efficiency while possessing simple processing methods. To gain a fundamental understanding of their properties on an atomic level, we investigate single crystals of CH3NH3PbI3 with a narrow transition (~5 K) near 327 K. Temperature dependent structural measurements reveal a persistent tetragonal structure with smooth changes in the atomic displacement parameters (ADPs) on crossing T*. We show that the ADPs for I ions yield extended flat regions in the potential wells consistent with the measured large thermal expansion parameter. Molecular dynamics simulations reveal that this material exhibits significant asymmetries in the Pb-I pair distribution functions. We also show that the intrinsically enhanced freedom of motion of the iodine atoms enables large deformations. This flexibility (softness) of the atomic structure results in highly localized atomic relaxation about defects and hence accounts for both the high carrier mobility as well as the structural instability.

4.
Clin Transl Radiat Oncol ; 7: 62-70, 2017 Dec.
Article in English | MEDLINE | ID: mdl-29594231

ABSTRACT

Traditionally rectal symptoms following pelvic/prostate radiotherapy are correlated to the dosimetry of the anorectum or a substructure of this. It has been suggested that the perirectal fat space (PRS) surrounding the rectum may also be relevant. This study considers the delineation and dosimetry of the PRS related to both rectal bleeding and control-related toxicity. Initially, a case-control cohort of 100 patients from the RADAR study were chosen based on presence/absence of rectal control-related toxicity. Automated contouring was developed to delineate the PRS. 79 of the 100 auto-segmentations were considered successful. Balanced case-control cohorts were defined from these cases. Atlas of Complication Incidence (ACI) were generated to relate the DVH of the PRS with specific rectal symptoms; rectal bleeding and control-related symptoms (LENT/SOM). ACI demonstrated that control-related symptoms were related to the dose distribution to the PRS which was confirmed with Wilcoxon rank sum test (p < 0.05). To the authors knowledge this is the first study implicating the dose distribution to the PRS to the incidence of control-related symptoms of rectal toxicity.

6.
Cell Biochem Funct ; 33(5): 277-84, 2015 Jul.
Article in English | MEDLINE | ID: mdl-26059711

ABSTRACT

Biomimetic scaffolds hold great promise for therapeutic repair of cartilage, but although most scaffolds are tested with cells in vitro, there are very few ex vivo models (EVMs) where adult cartilage and scaffolds are co-cultured to optimize their interaction prior to in vivo studies. This study describes a simple, non-compressive method that is applicable to mammalian or human cartilage and provides a reasonable throughput of samples. Rings of full-depth articular cartilage slices were derived from human donors undergoing knee replacement for osteoarthritis and a 3 mm core of a collagen/glycosaminoglycan biomimetic scaffold (Tigenix, UK) inserted to create the EVM. Adult osteoarthritis chondrocytes were seeded into the scaffold and cultures maintained for up to 30 days. Ex vivo models were stable throughout experiments, and cells remained viable. Chondrocytes seeded into the EVM attached throughout the scaffold and in contact with the cartilage explants. Cell migration and deposition of extracellular matrix proteins in the scaffold was enhanced by growth factors particularly if the scaffold was preloaded with growth factors. This study demonstrates that the EVM represents a suitable model that has potential for testing a range of therapeutic parameters such as numbers/types of cell, growth factors or therapeutic drugs before progressing to costly pre-clinical trials.


Subject(s)
Cartilage, Articular/metabolism , Collagen/metabolism , Glycosaminoglycans/metabolism , Insulin-Like Growth Factor I/metabolism , Osteoarthritis/metabolism , Cartilage, Articular/pathology , Cell Movement , Chondrocytes/metabolism , Cytokines/metabolism , Decorin/metabolism , Extracellular Matrix/metabolism , Humans , In Vitro Techniques , Knee/pathology , Osteoarthritis/pathology , Tissue Scaffolds
7.
Mymensingh Med J ; 24(2): 356-65, 2015 Apr.
Article in English | MEDLINE | ID: mdl-26007266

ABSTRACT

This study was carried out to compare MRA and DSA in diagnosis of cerebral AVM. It was a retrospective observational study conducted in the Department of Neurology Dhaka Medical College Hospital (DMCH), Dhaka during the period of January 2010 to December 2010. Thirty patients with haemorrhagic stroke age ranging from 13 to 65 years were selected on the basis of inclusion and exclusion criteria as the study sample. MRA and DSA were done in all the selected patients. The mean age of the patients of haemorrhagic stroke was 30.3 ± 14.3 years and male female ratio was 2.7:1. Regarding the venous drainage of AVM 13 and 12 were superficial and deep respectively, and evaluated 100% by MRA. In the diagnosis of cerebral AVM nidus size S1: <3 and S2: 3-6 cm sensitivity was 100% but accuracy was 100% and 73.3% respectively. DSA was 100% sensitive in the diagnosis of superficial and deep venous drainage AVM. Regarding the eloquence of brain area 15 had no eloquence by both MRA and DSA and identification of eloquence of brain area sensitivity was 73.3% and accuracy was 86.7%. The main feeding vessels was found (22, 73.3%) in both DSA and MRA findings. Distal vessels was seen (8, 26.7%) in DSA but not seen in MRA findings. Intranidal aneurysm and Angiopathic AVM were seen in 3(10.0%) and 4(13.3%) respectively in DSA. This study was carried out to diagnose the patients presented with cerebral AVM by MRA and DSA. MRA could not be evaluated flow status of AVM, distal feeding arteries, intranidal aneurysm and angiopathic AVM which could be detected by DSA. So, DSA is superior to MRA in diagnosis of cerebral AVM.


Subject(s)
Intracranial Arteriovenous Malformations , Adult , Angiography, Digital Subtraction , Bangladesh , Female , Humans , Magnetic Resonance Angiography , Male , Retrospective Studies
8.
APL Mater ; 3(1)2015 Jan.
Article in English | MEDLINE | ID: mdl-25506518

ABSTRACT

We describe the production of collagen fibre bundles through a multi-strand, semi-continuous extrusion process. Cross-linking using an EDC (1-ethyl-3-(3-dimethylaminopropyl)carbodiimide), NHS (N-hydroxysuccinimide) combination was considered. Atomic Force Microscopy (AFM) and Raman spectroscopy focused on how cross-linking affected the collagen fibrillar structure. In the cross-linked fibres, a clear fibrillar structure comparable to native collagen was observed which was not observed in the non-cross-linked fibre. The amide III doublet in the Raman spectra provided additional evidence of alignment in the cross-linked fibres. Raman spectroscopy also indicated no residual polyethylene glycol (from the fibre forming buffer) or water in any of the fibres.

9.
Mol Psychiatry ; 20(4): 433-9, 2015 Apr.
Article in English | MEDLINE | ID: mdl-24912493

ABSTRACT

Hippocampal dysfunction in schizophrenia is widely acknowledged, yet the mechanism of such dysfunction remains debated. In this study we investigate the excitatory and inhibitory hippocampal neurotransmission using two complementary methodologies, proton magnetic resonance spectroscopy (MRS) and tissue biochemistry, sampling individuals with schizophrenia in vivo and postmortem hippocampal tissue in vitro. The results show significantly lower glutamate concentrations in hippocampus in schizophrenia, an in vivo finding mirrored by lower GluN1 protein levels selectively in the dentate gyrus (DG) in vitro. In a mouse model with a DG knockout of the GRIN1 gene, we further confirmed that a selective decrease in DG GluN1 is sufficient to decrease the glutamate concentrations in the whole hippocampus. Gamma-aminobutyric acid (GABA) concentrations and GAD67 protein were not significantly different in hippocampus in schizophrenia. Similarly, GABA concentrations in the hippocampi of mice with a DG knockout of the GRIN1 gene were not significantly different from wild type. These findings provide strong evidence implicating the excitatory system within hippocampus in the pathophysiology of schizophrenia, particularly indicating the DG as a site of pathology.


Subject(s)
Dentate Gyrus/metabolism , Glutamic Acid/metabolism , Schizophrenia/pathology , Signal Transduction/physiology , Adolescent , Adult , Animals , Aspartic Acid/analogs & derivatives , Aspartic Acid/metabolism , Disease Models, Animal , Gene Expression Regulation , Humans , Magnetic Resonance Spectroscopy , Mice , Mice, Knockout , Middle Aged , Nerve Tissue Proteins/deficiency , Nerve Tissue Proteins/genetics , Postmortem Changes , Protons , Receptors, N-Methyl-D-Aspartate/deficiency , Receptors, N-Methyl-D-Aspartate/genetics , Young Adult
10.
Cell Death Dis ; 5: e1358, 2014 Jul 31.
Article in English | MEDLINE | ID: mdl-25077544

ABSTRACT

BH3 interacting-domain death agonist (Bid) is a BH3-only pro-apoptotic member of the Bcl-2 family of proteins. Its function in apoptosis is associated with the proteolytic cleavage to the truncated form tBid, mainly by caspase-8. tBid translocates to mitochondria and assists Bax and Bak in induction of apoptosis. c-Jun N-terminal kinase (JNK)-dependent alternative processing of Bid to jBid was also reported. We have previously shown that the folate stress enzyme 10-formyltetrahydrofolate dehydrogenase (ALDH1L1) activates JNK1 and JNK2 in cancer cells as a pro-apoptotic response. Here we report that in PC-3 prostate cancer cells, JNK1/2 phosphorylate Bid at Thr59 within the caspase cleavage site in response to ALDH1L1. In vitro, all three JNK isoforms, JNK 1-3, phosphorylated Thr59 of Bid with JNK1 being the least active. Thr59 phosphorylation protected Bid from cleavage by caspase-8, resulting in strong accumulation of the full-length protein and its translocation to mitochondria. Interestingly, although we did not observe jBid in response to ALDH1L1 in PC-3 cells, transient expression of Bid mutants lacking the caspase-8 cleavage site resulted in strong accumulation of jBid. Of note, a T59D mutant mimicking constitutive phosphorylation revealed more profound cleavage of Bid to jBid. JNK-driven Bid accumulation had a pro-apoptotic effect in our study: small interfering RNA silencing of either JNK1/2 or Bid prevented Bid phosphorylation and accumulation, and rescued ALDH1L1-expressing cells. As full-length Bid is a weaker apoptogen than tBid, we propose that the phosphorylation of Bid by JNKs, followed by the accumulation of the full-length protein, delays attainment of apoptosis, and allows the cell to evaluate the stress and make a decision regarding the response strategy. This mechanism perhaps can be modified by the alternative cleavage of phospho-T59 Bid to jBid at some conditions.


Subject(s)
Aldehyde Dehydrogenase/chemistry , Aldehyde Dehydrogenase/metabolism , BH3 Interacting Domain Death Agonist Protein/metabolism , Mitogen-Activated Protein Kinase 8/metabolism , Mitogen-Activated Protein Kinase 9/metabolism , Prostatic Neoplasms/enzymology , Aldehyde Dehydrogenase/genetics , Amino Acid Motifs , BH3 Interacting Domain Death Agonist Protein/genetics , Caspase 8/metabolism , Cell Line, Tumor , Humans , Male , Mitogen-Activated Protein Kinase 8/genetics , Mitogen-Activated Protein Kinase 9/genetics , Oxidoreductases Acting on CH-NH Group Donors , Phosphorylation , Prostatic Neoplasms/genetics , Threonine/genetics , Threonine/metabolism
11.
Mol Psychiatry ; 19(3): 342-50, 2014 Mar.
Article in English | MEDLINE | ID: mdl-23399917

ABSTRACT

Mice with a mutation in the Clock gene (ClockΔ19) have been identified as a model of mania; however, the mechanisms that underlie this phenotype, and the changes in the brain that are necessary for lithium's effectiveness on these mice remain unclear. Here, we find that cholecystokinin (Cck) is a direct transcriptional target of CLOCK and levels of Cck are reduced in the ventral tegmental area (VTA) of ClockΔ19 mice. Selective knockdown of Cck expression via RNA interference in the VTA of wild-type mice produces a manic-like phenotype. Moreover, chronic treatment with lithium restores Cck expression to near wild-type and this increase is necessary for the therapeutic actions of lithium. The decrease in Cck expression in the ClockΔ19 mice appears to be due to a lack of interaction with the histone methyltransferase, MLL1, resulting in decreased histone H3K4me3 and gene transcription, an effect reversed by lithium. Human postmortem tissue from bipolar subjects reveals a similar increase in Cck expression in the VTA with mood stabilizer treatment. These studies identify a key role for Cck in the development and treatment of mania, and describe some of the molecular mechanisms by which lithium may act as an effective antimanic agent.


Subject(s)
Bipolar Disorder/drug therapy , Bipolar Disorder/metabolism , Bipolar Disorder/physiopathology , CLOCK Proteins/physiology , Cholecystokinin/physiology , Lithium Chloride/therapeutic use , Animals , Behavior, Animal/physiology , CLOCK Proteins/genetics , Cholecystokinin/biosynthesis , Gene Knockdown Techniques , Histone-Lysine N-Methyltransferase/metabolism , Humans , Lithium Chloride/pharmacology , Male , Mice , Mutation , Myeloid-Lymphoid Leukemia Protein/metabolism , Ventral Tegmental Area/drug effects , Ventral Tegmental Area/metabolism
12.
Mol Psychiatry ; 19(5): 573-9, 2014 May.
Article in English | MEDLINE | ID: mdl-23628987

ABSTRACT

Neuronal firing is a fundamental element of cerebral function; and, voltage-gated potassium (K(+)) channels regulate that firing through the repolarization of action potentials. Kv3-type channels (Kv3.1-Kv3.4) represent a family of voltage-gated K(+) channels that have fast-spiking properties. Kv3.1 channel subunits are predominantly localized to cortical parvalbumin (PV)-positive, inhibitory interneurons. The firing properties of these interneurons participate in establishing the normal gamma oscillations and synchrony of cortical neuronal populations, thought to be the signature of higher information processing in human brain. Schizophrenia (SZ) is associated with abnormalities in cortical gamma synchrony and in information processing, particularly with dysfunction in working memory and executive function. Here, we report the distribution of Kv3.1b and Kv3.2 protein in normal human brain, showing that Kv3.1b is limited to neocortical areas, whereas Kv3.2 is abundantly represented in neo- and subcortical regions. In SZ cases, levels of Kv3.1b protein are decreased in the neocortex, but only in cases without antipsychotic drug (APD) treatment; Kv3.1 levels are normal in antipsychotic-treated cases. Kv3.2 is not different in distribution or in level between normal and SZ cases, nor influenced by APD, in any region tested. The apparent increase in Kv3.1b protein levels by APDs in SZ neocortex was confirmed in laboratory rodents treated with chronic APDs. These findings show a decrease in Kv3.1b channel protein in SZ neocortex, a deficit that is restored by APDs. This alteration could be fundamentally involved in the cortical manifestations of SZ and in the therapeutic response to APDs.


Subject(s)
Antipsychotic Agents/pharmacology , Brain/drug effects , Brain/metabolism , Schizophrenia/drug therapy , Schizophrenia/metabolism , Shaw Potassium Channels/metabolism , Animals , Cohort Studies , Haloperidol/pharmacology , Humans , Neocortex/drug effects , Neocortex/metabolism , RNA, Messenger/metabolism , Rats , Risperidone/pharmacology , Treatment Outcome
13.
J Biomed Mater Res A ; 101(1): 176-84, 2013 Jan.
Article in English | MEDLINE | ID: mdl-22829541

ABSTRACT

Porous collagen-glycosaminoglycan structures are bioactive and exhibit a pore architecture favorable for both cellular infiltration and attachment; however, their inferior mechanical properties limit use, particularly in load-bearing situations. Reinforcement with collagen fibers may be a feasible route for enhancing the mechanical characteristics of these materials, providing potential for composites used for the repair and regeneration of soft tissue such as tendon, ligaments, and cartilage. Therefore, this study investigates the reinforcement of collagen-chondroitin-6-sulfate (C6S) porous structures with bundles of extruded, reconstituted type I collagen fibers. Fiber bundles were produced through extrusion and then, where applicable, crosslinked using a solution of 1-ethyl-3-(3-dimethylaminopropyl) carbodiimide/N-hydroxysuccinimide. Fibers were then submerged in the collagen-C6S matrix slurry before being lyophilized. A second 1-ethyl-3-(3-dimethylaminopropyl) carbodiimide and N-hydroxysuccinimide crosslinking process was then applied to the composite material before a secondary lyophilization cycle. Where bundles had been previously crosslinked, composites withstood a load of approximately 60 N before failure, the reinforcing fibers remained dense and a favorable matrix pore structure resulted, with good interaction between fiber and matrix. Fibers that had not been crosslinked before lyophilization showed significant internal porosity and a channel existed between them and the matrix. Mechanical properties were significantly reduced, but the additional porosity could prove favorable for cell migration and has potential for directing aligned tissue growth.


Subject(s)
Biocompatible Materials/pharmacology , Chondroitin Sulfates/pharmacology , Cross-Linking Reagents/pharmacology , Fibrillar Collagens/pharmacology , Regeneration/drug effects , Animals , Cattle , Compressive Strength , Elastic Modulus , Freeze Drying , Materials Testing , Microscopy, Electron, Scanning , Tensile Strength , Weight-Bearing
14.
Transl Psychiatry ; 2: e199, 2012 Nov 27.
Article in English | MEDLINE | ID: mdl-23188199

ABSTRACT

Clinical studies report associations between cannabis use during adolescence and later onset of schizophrenia. We examined the causal relationship between developmental cannabinoid administration and long-term behavioral and molecular alterations in mice. Mice were administered either WIN 55,212-2 (WIN), a cannabinoid receptor 1 (CB1) agonist or vehicle (Veh) during adolescence (postnatal day 30-35) or early adulthood (postnatal day 63-70). Behavioral testing was conducted after postnatal day 120 followed by biochemical assays. Adolescent cannabinoid treatment (ACU) leads to deficits in prepulse inhibition and fear conditioning in adulthood. Metabotropic glutamate receptors type 5 (mGluR5), a receptor critically involved in fear conditioning and endocannabinoid (eCB) signaling, is significantly reduced in the ACU mouse hippocampus. Next, we examined expression profiles of genes involved in eCB synthesis (diacylglycerol lipase (DGL)) and uptake (monoacylglycerol lipase (MGL) and fatty acid amide hydrolase (FAAH)) in the experimental mice. We find evidence of increased MGL and FAAH in ACU mice, reflecting increases in eCB uptake and degradation. These data suggest that administration of cannabinoids during adolescence leads to a behavioral phenotype associated with a rodent model of schizophrenia, as indexed by alterations in sensorimotor gating and hippocampal-dependent learning and memory deficits. Further, these deficits are associated with a reduction in hippocampal mGluR5 and a sustained change in eCB turnover, suggesting reduced eCB signaling in the ACU hippocampus. These data suggest that significant cannabis use during adolescence may be a contributory causal factor in the development of certain features of schizophrenia and may offer mGluR5 as a potential therapeutic target.


Subject(s)
Behavior, Animal/drug effects , Cannabinoids/pharmacology , Conditioning, Psychological/drug effects , Hippocampus , Schizophrenia , Animals , Benzoxazines/administration & dosage , Benzoxazines/pharmacology , Disease Models, Animal , Disease Susceptibility/chemically induced , Fear/drug effects , Hippocampus/drug effects , Hippocampus/physiopathology , Inhibition, Psychological , Mice , Mice, Inbred C57BL , Morpholines/administration & dosage , Morpholines/pharmacology , Naphthalenes/administration & dosage , Naphthalenes/pharmacology , Receptor, Cannabinoid, CB1/drug effects , Receptor, Metabotropic Glutamate 5 , Receptors, Metabotropic Glutamate/drug effects , Schizophrenia/chemically induced , Schizophrenia/physiopathology
15.
Br J Dermatol ; 167(3): 583-90, 2012 Sep.
Article in English | MEDLINE | ID: mdl-22458737

ABSTRACT

BACKGROUND: E-cadherin and ß-catenin are crucial components of the cell-cell adhesion complex. Their loss has often been associated with tumour metastasis and poor clinical outcome. Both loss of E-cadherin at the cell membrane and a stabilizing mutation in CTNNB1 (ß-catenin gene) have been associated with ovarian, colorectal, hepatocellular and nonmelanoma skin cancer, such as squamous and basal cell carcinomas. Absence of E-cadherin may be caused by promoter hypermethylation of the E-cadherin gene (CDH1). OBJECTIVES: To determine the role of E-cadherin promoter hypermethylation and CTNNB1 gene mutation in the aggressive behaviour of sebaceous gland carcinoma of the eyelid. METHODS: Thirty-six cases of sebaceous gland carcinoma were subjected to E-cadherin methylation-specific polymerase chain reaction and mutational analysis for the CTNNB1 gene. E-cadherin and ß-catenin staining was evaluated by immunohistochemistry. Results were correlated with the clinicopathological features of sebaceous gland carcinoma. RESULTS: nMethylation of the E-cadherin promoter region was detected in 72% of eyelid sebaceous gland carcinoma cases and loss of E-cadherin immunostaining in 83%. E-cadherin promoter hypermethylation showed a significant association with the loss of membranous E-cadherin (P = 0·038) and it was of borderline significance with reduced disease-free survival (P = 0·05). It was also found to be associated with advanced age (73%), tumour size ≥ 2 cm (77%), orbital invasion (83%), lymph node metastasis (60%), tumour recurrence (60%) and poor histological differentiation (90%). DNA sequencing revealed no stabilizing ß-catenin gene mutation in sebaceous gland carcinoma. Loss of membranous ß-catenin was observed in 61% cases, which associated significantly with both E-cadherin promoter methylation (P = 0·0262) and loss of E-cadherin membranous localization (P=0·0015). CONCLUSION: Epigenetic inactivation of the E-cadherin gene causes loss of membrane-bound E-cadherin and could contribute to the reduced disease-free survival in eyelid sebaceous gland carcinoma. Mutations in the ß-catenin gene do not seem to be involved in the pathogenesis of eyelid sebaceous gland carcinoma.


Subject(s)
Cadherins/genetics , Eyelid Neoplasms/genetics , Gene Silencing/physiology , Mutation/genetics , Sebaceous Gland Neoplasms/genetics , beta Catenin/genetics , Adult , Aged , Cadherins/deficiency , Cadherins/metabolism , DNA Methylation/genetics , DNA Mutational Analysis , Epigenesis, Genetic/genetics , Female , Humans , Immunohistochemistry , Kaplan-Meier Estimate , Male , Middle Aged , Polymerase Chain Reaction , Prognosis , Promoter Regions, Genetic/genetics , beta Catenin/metabolism
16.
Singapore Med J ; 53(2): 128-35; quiz 136, 2012 Feb.
Article in English | MEDLINE | ID: mdl-22337189

ABSTRACT

Retinoblastoma is the most common intraocular malignancy in children and one of the very few life-threatening ophthalmic conditions. Genetically, the disease may be heritable or non-heritable. It can have unilateral or bilateral involvement and can present either sporadically or with a positive family history. Leukocoria and strabismus are the most common presentations. Diagnosis is made by indirect ophthalmoscopy aided by imaging techniques. Multidisciplinary management is aimed at saving lives, salvaging the globe and maintaining good vision. The use of neoadjuvant chemotherapy and focal treatments, such as cryotherapy, laser photocoagulation, transpupillary thermotherapy, brachytherapy and periocular chemotherapy, form the mainstay of globe preserving treatment in retinoblastoma. In developing countries, retinoblastoma is unfortunately accompanied by a high mortality rate due to delayed diagnosis made at advanced stages of the disease. Early diagnosis and timely management are vital for a good prognosis.


Subject(s)
Retinal Neoplasms/therapy , Retinoblastoma/therapy , Child , Humans , Retina/pathology , Retinal Neoplasms/diagnosis , Retinal Neoplasms/pathology , Retinoblastoma/diagnosis , Retinoblastoma/pathology
17.
J Environ Radioact ; 105: 70-5, 2012 Feb.
Article in English | MEDLINE | ID: mdl-22230023

ABSTRACT

Migration behavior of radionuclide is one of the most important factors to be considered for the long-term safety assessment of a radioactive waste disposal facility in a wet geological formation. In the present study, laboratory based column experiments have been carried out to assess the radionuclide migration behavior of ¹³7Cs and 6°Co and to evaluate the retardation factor through a clay soil layers using gamma spectrometry. Investigation was performed for a range of particle sizes and fixed column lengths to determine an appropriate value of migration rate of ¹³7Cs and 6°Co. The distribution pattern of particle size in soil samples were measured by sieved method. Two different particle sizes (≤ 90 µm and mixed size) were used in the column experiments. The migration rate in the clay type soil layer of particle size ≤ 90 µm was found by the order of 6°Co > ¹³7Cs. The maximum migration length of 6°Co in the soil layer was found to be 0-25 cm, however in the case of ¹³7Cs it was found at a maximum length of 0-10 cm. The distribution coefficient of 6°Co was found nearly same as that of ¹³7Cs. The retardation factor was found to be 1.79 and 1.94 for 6°Co and ¹³7Cs, respectively. The experimental breakthrough from this study indicates that the amount of radioactive cesium and cobalt released depends upon the composition of the soils.


Subject(s)
Cesium Radioisotopes/analysis , Cobalt Radioisotopes/analysis , Radioactive Waste , Soil Pollutants, Radioactive/analysis , Water Pollutants, Radioactive/analysis , Bangladesh , Particle Size , Refuse Disposal , Soil
18.
Article in English | MEDLINE | ID: mdl-23366392

ABSTRACT

Imaging artifacts in Transrectal Ultrasound (TRUS) images and inter-patient variations in prostate shape and size challenge computer-aided automatic or semi-automatic segmentation of the prostate. In this paper, we propose to use multiple mean parametric models derived from principal component analysis (PCA) of shape and posterior probability information to segment the prostate. In contrast to traditional statistical models of shape and intensity priors, we use posterior probability of the prostate region determined from random forest classification to build, initialize and propagate our model. Multiple mean models derived from spectral clustering of combined shape and appearance parameters ensure improvement in segmentation accuracies. The proposed method achieves mean Dice similarity coefficient (DSC) value of 0.96±0.01, with a mean segmentation time of 0.67±0.02 seconds when validated with 46 images from 23 datasets in a leave-one-patient-out validation framework.


Subject(s)
Image Interpretation, Computer-Assisted/methods , Pattern Recognition, Automated/methods , Prostate/diagnostic imaging , Subtraction Technique , Ultrasonography/methods , Computer Simulation , Humans , Male , Models, Biological , Models, Statistical , Reproducibility of Results , Sensitivity and Specificity
19.
Article in English | MEDLINE | ID: mdl-23367154

ABSTRACT

This paper presents a novel method to identify the 2D axial Magnetic Resonance (MR) slice from a pre-acquired MR prostate volume that closely corresponds to the 2D axial Transrectal Ultrasound (TRUS) slice obtained during prostate biopsy. The method combines both shape and image intensity information. The segmented prostate contours in both the imaging modalities are described by shape-context representations and matched using the Chi-square distance. Normalized mutual information and correlation coefficient between the TRUS and MR slices are computed to find image similarities. Finally, the joint probability values comprising shape and image similarities are used in a rule-based framework to provide the MR slice that closely resembles the TRUS slice acquired during the biopsy procedure. The method is evaluated for 20 patient datasets, of which 18 results match at least one of the two clinical expert choices.


Subject(s)
Magnetic Resonance Imaging/methods , Probability , Prostatic Neoplasms/diagnosis , Biopsy , Humans , Male , Prostatic Neoplasms/pathology
20.
Eye (Lond) ; 26(3): 448-53, 2012 Mar.
Article in English | MEDLINE | ID: mdl-22157916

ABSTRACT

PURPOSE: To study the effect of orbital tumors on visual functions and highlight the factors predictive of visual outcome after surgery. METHODS: A prospective interventional study compared visual function parameters and fundus changes, before and after surgery, in eyes having well-defined orbital tumors with the normal fellow eye. These included visual acuity (VA), refractive error, keratometry changes, color vision, Goldmann visual field (GVF), and visual evoked response (VER). RESULTS: In total 28 cases (age range 7-56 years), of which the majority of tumors were vascular (46%) and lacrimal (18%) in origin, had a mean VA of 0.54±0.33 in the affected eye, which improved postoperatively to 0.66±0.31 (P=0.002). The affected eye had a median refractive error of +0.00 DS (-2.00 to 5.13), which was significantly more hyperopic than the normal eye (median +0.00 DS; range -1.25 to +1.63 DS) and normalized postoperatively. Keratometry showed higher astigmatism in the involved eye (P=0.004). The fundus showed disc pallor, edema, and/or choroidal folds, of which disc edema resolved in all cases after surgery. In all, 40% of the affected eyes had a deficient color vision and this partially improved postoperatively (P=0.25). GVF had abnormalities in 10 cases, half of which normalized postoperatively (P=0.04). The VER of affected eyes had a mean amplitude of 8.91±4.59 µv and latency of 116.3±14.7 ms, with improvement after surgery (P=0.005 and 0.001, respectively). CONCLUSION: Orbital tumors adversely affected visual functions. The presenting acuity depended on disc changes, color vision abnormalities, and prolonged VER latency. The postoperative VA depended on VA at presentation, amount of proptosis, degree of hyperopia, and clinically significant VER abnormalities.


Subject(s)
Orbital Neoplasms/physiopathology , Orbital Neoplasms/surgery , Visual Perception/physiology , Adolescent , Adult , Child , Color Vision/physiology , Evoked Potentials, Visual/physiology , Female , Humans , Male , Middle Aged , Predictive Value of Tests , Prospective Studies , Refractive Errors/physiopathology , Visual Acuity/physiology , Visual Fields/physiology , Young Adult
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