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1.
J Med Chem ; 64(18): 13327-13355, 2021 09 23.
Article in English | MEDLINE | ID: mdl-34469137

ABSTRACT

Inhibition of intracellular N-acylethanolamine-hydrolyzing acid amidase (NAAA) activity is a promising approach to manage the inflammatory response under disabling conditions. In fact, NAAA inhibition preserves endogenous palmitoylethanolamide (PEA) from degradation, thus increasing and prolonging its anti-inflammatory and analgesic efficacy at the inflamed site. In the present work, we report the identification of a potent, systemically available, novel class of NAAA inhibitors, featuring a pyrazole azabicyclo[3.2.1]octane structural core. After an initial screening campaign, a careful structure-activity relationship study led to the discovery of endo-ethoxymethyl-pyrazinyloxy-8-azabicyclo[3.2.1]octane-pyrazole sulfonamide 50 (ARN19689), which was found to inhibit human NAAA in the low nanomolar range (IC50 = 0.042 µM) with a non-covalent mechanism of action. In light of its favorable biochemical, in vitro and in vivo drug-like profile, sulfonamide 50 could be regarded as a promising pharmacological tool to be further investigated in the field of inflammatory conditions.


Subject(s)
Amidohydrolases/antagonists & inhibitors , Anti-Inflammatory Agents/pharmacology , Enzyme Inhibitors/pharmacology , Pyrazoles/pharmacology , Tropanes/pharmacology , Amidohydrolases/metabolism , Animals , Anti-Inflammatory Agents/chemical synthesis , Anti-Inflammatory Agents/metabolism , Anti-Inflammatory Agents/pharmacokinetics , Enzyme Inhibitors/chemical synthesis , Enzyme Inhibitors/metabolism , Enzyme Inhibitors/pharmacokinetics , Humans , Male , Mice, Inbred C57BL , Microsomes, Liver/metabolism , Molecular Docking Simulation , Molecular Structure , Protein Binding , Pyrazoles/chemical synthesis , Pyrazoles/metabolism , Pyrazoles/pharmacokinetics , Rats, Sprague-Dawley , Structure-Activity Relationship , Tropanes/chemical synthesis , Tropanes/metabolism , Tropanes/pharmacokinetics
2.
J Med Chem ; 63(19): 11169-11194, 2020 10 08.
Article in English | MEDLINE | ID: mdl-32946228

ABSTRACT

Cystic fibrosis (CF) is a life-threatening autosomal recessive disease, caused by mutations in the CF transmembrane conductance regulator (CFTR) chloride channel. CFTR modulators have been reported to address the basic defects associated with CF-causing mutations, partially restoring the CFTR function in terms of protein processing and/or channel gating. Small-molecule compounds, called potentiators, are known to ameliorate the gating defect. In this study, we describe the identification of the 2,3,4,5-tetrahydro-1H-pyrido[4,3-b]indole core as a novel chemotype of potentiators. In-depth structure-activity relationship studies led to the discovery of enantiomerically pure 39 endowed with a good efficacy in rescuing the gating defect of F508del- and G551D-CFTR and a promising in vitro druglike profile. The in vivo characterization of γ-carboline 39 showed considerable exposure levels and good oral bioavailability, with detectable distribution to the lungs after oral administration to rats. Overall, these findings may represent an encouraging starting point to further expand this chemical class, adding a new chemotype to the existing classes of CFTR potentiators.


Subject(s)
Cystic Fibrosis Transmembrane Conductance Regulator/drug effects , Indoles/pharmacology , Animals , Humans , Indoles/chemistry , Male , Rats , Rats, Sprague-Dawley , Structure-Activity Relationship
3.
Sci Rep ; 8(1): 3042, 2018 02 14.
Article in English | MEDLINE | ID: mdl-29445091

ABSTRACT

Amadoriases are a class of FAD-dependent enzymes that are found in fungi, yeast and bacteria and that are able to hydrolyze glycated amino acids, cleaving the sugar moiety from the amino acidic portion. So far, engineered Amadoriases have mostly found practical application in the measurement of the concentration of glycated albumin in blood samples. However, these engineered forms of Amadoriases show relatively low absolute activity and stability levels, which affect their conditions of use. Therefore, enzyme stabilization is desirable prior to function-altering molecular engineering. In this work, we describe a rational design strategy based on a computational screening method to evaluate a library of potentially stabilizing disulfide bonds. Our approach allowed the identification of two thermostable Amadoriase I mutants (SS03 and SS17) featuring a significantly higher T50 (55.3 °C and 60.6 °C, respectively) compared to the wild-type enzyme (52.4 °C). Moreover, SS17 shows clear hyperstabilization, with residual activity up to 95 °C, whereas the wild-type enzyme is fully inactive at 55 °C. Our computational screening method can therefore be considered as a promising approach to expedite the design of thermostable enzymes.


Subject(s)
Amino Acid Oxidoreductases/metabolism , Amino Acid Oxidoreductases/chemistry , Amino Acid Oxidoreductases/genetics , Amino Acid Sequence , Amino Acids , Bioengineering/methods , Enzyme Stability , Gene Library , Kinetics , Models, Molecular , Temperature
4.
Anal Biochem ; 495: 52-9, 2016 Feb 15.
Article in English | MEDLINE | ID: mdl-26686030

ABSTRACT

Nuclear magnetic resonance (NMR)-based screening has been recognized as a powerful approach for the identification and characterization of molecules interacting with pharmaceutical targets. Indeed, several NMR methods have been developed and successfully applied to many drug discovery projects. Whereas most of these approaches have targeted isolated biomolecular receptors, very few cases are reported with the screening performed in intact cells and cell extracts. Here we report the first successful application of the fluorine NMR-based assay n-FABS (n-fluorine atoms for biochemical screening) in living mammalian cells expressing the membrane protein fatty acid amide hydrolase (FAAH). This method allows the identification of both weak and potent inhibitors and the measurement of their potency in a physiological environment.


Subject(s)
Amidohydrolases/analysis , Nuclear Magnetic Resonance, Biomolecular , Amidohydrolases/metabolism , Benzamides/chemistry , Benzamides/metabolism , Carbamates/chemistry , Carbamates/metabolism , Fluorine/chemistry , HEK293 Cells , Humans , Inhibitory Concentration 50
5.
Org Lett ; 12(6): 1156-9, 2010 Mar 19.
Article in English | MEDLINE | ID: mdl-20166707

ABSTRACT

A new strategy to access highly enantioenriched cyclic compounds (up to 98%) is proposed using omega-ethylenic allylic substrates through a one-pot asymmetric allylic alkylation and ring-closing metathesis. Such starting compounds can be seen as synthetic equivalents of cyclic allylic substrates.


Subject(s)
Allyl Compounds/chemistry , Allyl Compounds/chemical synthesis , Copper/chemistry , Ethylenes/chemistry , Iridium/chemistry , Organometallic Compounds/chemistry , Alkylation , Catalysis , Cyclization , Molecular Structure , Stereoisomerism
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