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1.
Pan Afr Med J ; 36: 309, 2020.
Article in English | MEDLINE | ID: mdl-33282092

ABSTRACT

INTRODUCTION: the objective was to evaluate the impact of IDH1 R132H mutation, MGMT methylation and PD-L1 expression in high grade glioma that received standard therapy (surgery, radiation and chemotherapy) to overall survival (OS). METHODS: this is a retrospective study of 35 high grade glioma cases. Genotyping of IDH1 gene alteration on the mutation hotspot R132 (Sanger sequencing method with Applied Biosystems 3500 Genetic Analyzer), EZ DNA Methylation-Gold kit (Zymo Research) is used to study the methylation, Cell line BT549 (ATCC HTB-122) and HCT-116 (ATCC CCL-247) were used as unmethylated control and partially methylated control respectively. Anti-human PD-L1 antibody clone E1L3N®from Cell Signalling Technology (USA) and Rabbit XP®were used to see PDL-1 expression. RESULTS: anaplastic astrocytoma cases had more MGMT promoter methylation (50%) than glioblastoma multiforme (GBM) (20%), more IDH1 R132H mutation (42%) than GBM (4.3%). Immunohistochemistry tumor proportion score method (TPS) identified 17% and 8.7% were PD-L1 positive in AA and GBM groups, respectively. Cases with IDH1 R132H mutation and MGMT methylation still showed better OS although with high PD-L1 expression. CONCLUSION: IDH1 R132H mutation and MGMT methylation were good prognostic markers. High expression of PD-L1 apparently might not indicate poor overall survival in the presence of IDH1 R132 mutation and MGMT methylation.


Subject(s)
Astrocytoma/pathology , B7-H1 Antigen/genetics , DNA Modification Methylases/genetics , DNA Repair Enzymes/genetics , Glioblastoma/pathology , Isocitrate Dehydrogenase/genetics , Tumor Suppressor Proteins/genetics , Adolescent , Adult , Aged , Astrocytoma/genetics , Astrocytoma/therapy , DNA Methylation , Female , Glioblastoma/genetics , Glioblastoma/therapy , Humans , Male , Middle Aged , Mutation , Prognosis , Promoter Regions, Genetic/genetics , Retrospective Studies , Survival Rate , Young Adult
2.
Sci Rep ; 9(1): 15160, 2019 10 22.
Article in English | MEDLINE | ID: mdl-31641164

ABSTRACT

Newcastle disease virus (NDV) strongly induces both type I and III antiviral interferons (IFNs-α/-ß and IFN-λ, respectively) in tumor cells while it induces mainly type III IFN in normal cells. Impairment of antiviral type I IFN signaling in tumor cells is thought to be the reason for effective oncolysis. However, there is lack of clarity why lentogenic strain NDV can also induce oncolysis. NDV infection caused apoptosis in normal and tumor cells as demonstrated with the caspase-3 enzyme activation and annexin-V detection. The apoptosis response was inhibited by B18R protein (a type I IFN inhibitor) in tumor cells i.e. A549 and U87MG, and not in normal cells i.e. NB1RGB and HEK293. Similarly, UV-inactivated medium from NDV infection was shown to induce apoptosis in corresponding cells and the response was inhibited in A549 and U87MG cells with the addition of B18R protein. Treatment with combination of IFNs-α/-ß/-λ or IFNs-α/-ß or IFN-λ in NB1RGB, HEK293, A549 and U87MG showed that caspase activity in IFNs-α/-ß/-λ group was the highest, followed with IFN-α/-ß group and IFN-λ group. This suggests that tumor-selectivity of NDV is mainly because of the cumulative effect of type I and III in tumor cells that lead to higher apoptotic effect.


Subject(s)
Antiviral Agents/pharmacology , Apoptosis/drug effects , Interferons/pharmacology , Neoplasms/pathology , Newcastle disease virus/physiology , Cell Line, Tumor , Humans , Models, Biological , Solubility , Viral Proteins/pharmacology , Virus Replication/drug effects
3.
Oncolytic Virother ; 6: 21-30, 2017.
Article in English | MEDLINE | ID: mdl-28293547

ABSTRACT

PURPOSE: To investigate the specific role of immune responses induced by lentogenic Newcastle disease virus (NDV) for its antitumor effect. MATERIALS AND METHODS: NDV LaSota strain was used to infect the following human cells: non-small cell lung carcinoma (A549), glioblastoma (U87MG and T98G), mammary gland adenocarcinoma (MCF7 and MDA-MB-453), hepatocellular carcinoma (Huh7), transformed embryonic kidney cells (HEK293), primary monocytes, lung fibroblast (HF19), skin fibroblast (NB1RGB) and rat astroglia (RCR-1) at 0.001 multiplicity of infection. NDV-induced cytotoxicity and expression of proinflammatory cytokines were analyzed using 3-(4,5-dimethylthiazol-2-Yl)-2,5-diphenyltetrazolium bromide assay and multiplex enzyme-linked immunosorbent assay, respectively. RESULTS: Tumor cells (A549, U87MG, T98G, Huh7, MDA-MB-453, and MCF7) showed viability of <44%, while normal cell lines HEK293, NB1RGB, and RCR-1 showed 84%, 73%, and 69% viability at 72 hours postinfection, respectively. Proinflammatory cytokine profiling showed that NDV mainly induced the secretion of interferon (IFN)-α, IFN-ß, and IFN-λ in tumor cells and only IFN-λ in normal cells. In addition, NDV infection induced the production of interleukin (IL)-6 in most cells. CONCLUSION: Our findings suggest a new perspective regarding the role of IFN-λ and IL-6 in the mechanism of tumor selectivity and oncolysis of NDV.

4.
J Virol ; 86(1): 121-7, 2012 Jan.
Article in English | MEDLINE | ID: mdl-22013054

ABSTRACT

Oseltamivir-resistant H1N1 influenza viruses emerged in 2007 to 2008 and have subsequently circulated widely. However, prior to 2007 to 2008, viruses possessing the neuraminidase (NA) H274Y mutation, which confers oseltamivir resistance, generally had low growth capability. NA mutations that compensate for the deleterious effect of the NA H274Y mutation have since been identified. Given the importance of the functional balance between hemagglutinin (HA) and NA, we focused on amino acid changes in HA. Reverse genetic analysis showed that a mutation at residue 82, 141, or 189 of the HA protein promotes virus replication in the presence of the NA H274Y mutation. Our findings thus identify HA mutations that contributed to the replacement of the oseltamivir-sensitive viruses of 2007 to 2008.


Subject(s)
Amino Acid Substitution , Antiviral Agents/pharmacology , Drug Resistance, Viral , Hemagglutinin Glycoproteins, Influenza Virus/genetics , Influenza A Virus, H1N1 Subtype/physiology , Influenza, Human/virology , Oseltamivir/pharmacology , Virus Replication , Amino Acid Sequence , Amino Acid Substitution/drug effects , Animals , Cell Line , Drug Resistance, Viral/drug effects , Hemagglutinin Glycoproteins, Influenza Virus/chemistry , Hemagglutinin Glycoproteins, Influenza Virus/metabolism , Humans , Influenza A Virus, H1N1 Subtype/classification , Influenza A Virus, H1N1 Subtype/drug effects , Influenza A Virus, H1N1 Subtype/genetics , Molecular Sequence Data , Mutation, Missense , Neuraminidase/genetics , Neuraminidase/metabolism , Phylogeny , Sequence Alignment , Viral Proteins/genetics , Viral Proteins/metabolism , Virus Replication/drug effects
5.
Microbiol Immunol ; 55(9): 666-72, 2011 Sep.
Article in English | MEDLINE | ID: mdl-21699556

ABSTRACT

The isolation of an H5N1 influenza A virus from a tree sparrow (Passer montanus) captured in East Java, Indonesia in 2010 is reported here. Its hemagglutinin and neuraminidase were genetically similar to those of human isolates from 2006-2007 in Indonesia. The finding of a tree sparrow H5N1 virus that possesses genetically similar surface molecules to those of human viruses highlights the importance of monitoring resident wild birds, as well as migratory birds, for pandemic preparedness.


Subject(s)
Influenza A Virus, H5N1 Subtype/isolation & purification , Influenza in Birds/virology , Sparrows/virology , Animals , Cluster Analysis , Hemagglutinin Glycoproteins, Influenza Virus/genetics , Indonesia , Influenza A Virus, H5N1 Subtype/genetics , Influenza A Virus, H5N1 Subtype/pathogenicity , Molecular Sequence Data , Neuraminidase/genetics , Phylogeny , Sequence Analysis, DNA , Sequence Homology, Amino Acid , Viral Proteins/genetics
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