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1.
Proc Natl Acad Sci U S A ; 119(6)2022 02 08.
Article in English | MEDLINE | ID: mdl-35115399

ABSTRACT

The RecQ-like helicase BLM cooperates with topoisomerase IIIα, RMI1, and RMI2 in a heterotetrameric complex (the "Bloom syndrome complex") for dissolution of double Holliday junctions, key intermediates in homologous recombination. Mutations in any component of the Bloom syndrome complex can cause genome instability and a highly cancer-prone disorder called Bloom syndrome. Some heterozygous carriers are also predisposed to breast cancer. To understand how the activities of BLM helicase and topoisomerase IIIα are coupled, we purified the active four-subunit complex. Chemical cross-linking and mass spectrometry revealed a unique architecture that links the helicase and topoisomerase domains. Using biochemical experiments, we demonstrated dimerization mediated by the N terminus of BLM with a 2:2:2:2 stoichiometry within the Bloom syndrome complex. We identified mutations that independently abrogate dimerization or association of BLM with RMI1, and we show that both are dysfunctional for dissolution using in vitro assays and cause genome instability and synthetic lethal interactions with GEN1/MUS81 in cells. Truncated BLM can also inhibit the activity of full-length BLM in mixed dimers, suggesting a putative mechanism of dominant-negative action in carriers of BLM truncation alleles. Our results identify critical molecular determinants of Bloom syndrome complex assembly required for double Holliday junction dissolution and maintenance of genome stability.


Subject(s)
Bloom Syndrome/genetics , DNA, Cruciform/genetics , Genomic Instability/genetics , Alleles , Carrier Proteins/genetics , Cell Line , DNA Topoisomerases, Type I/genetics , Humans , Mutation/genetics , Protein Binding/genetics , RecQ Helicases/genetics , Recombination, Genetic/genetics , Solubility
2.
Mol Ther ; 29(9): 2841-2853, 2021 09 01.
Article in English | MEDLINE | ID: mdl-33940155

ABSTRACT

A primary challenge in lentiviral gene therapy of ß-hemoglobinopathies is to maintain low vector copy numbers to avoid genotoxicity while being reliably therapeutic for all genotypes. We designed a high-titer lentiviral vector, LVß-shα2, that allows coordinated expression of the therapeutic ßA-T87Q-globin gene and of an intron-embedded miR-30-based short hairpin RNA (shRNA) selectively targeting the α2-globin mRNA. Our approach was guided by the knowledge that moderate reduction of α-globin chain synthesis ameliorates disease severity in ß-thalassemia. We demonstrate that LVß-shα2 reduces α2-globin mRNA expression in erythroid cells while keeping α1-globin mRNA levels unchanged and ßA-T87Q-globin gene expression identical to the parent vector. Compared with the first ßA-T87Q-globin lentiviral vector that has received conditional marketing authorization, BB305, LVß-shα2 shows 1.7-fold greater potency to improve α/ß ratios. It may thus result in greater therapeutic efficacy and reliability for the most severe types of ß-thalassemia and provide an improved benefit/risk ratio regardless of the ß-thalassemia genotype.


Subject(s)
Genetic Vectors/administration & dosage , RNA, Small Interfering/genetics , alpha-Globins/genetics , beta-Globins/genetics , beta-Thalassemia/genetics , Cell Line , Cells, Cultured , Down-Regulation , Erythroid Cells/cytology , Erythroid Cells/metabolism , Genotype , Humans , K562 Cells , Lentivirus/genetics , Lentivirus/physiology , MicroRNAs/antagonists & inhibitors , Primary Cell Culture , Viral Load , beta-Thalassemia/therapy
3.
Stem Cell Reports ; 7(3): 508-517, 2016 09 13.
Article in English | MEDLINE | ID: mdl-27499201

ABSTRACT

While Cas9 nucleases permit rapid and efficient generation of gene-edited cell lines, the CRISPR-Cas9 system can introduce undesirable "on-target" mutations within the second allele of successfully modified cells via non-homologous end joining (NHEJ). To address this, we fused the Streptococcus pyogenes Cas9 (SpCas9) nuclease to a peptide derived from the human Geminin protein (SpCas9-Gem) to facilitate its degradation during the G1 phase of the cell cycle, when DNA repair by NHEJ predominates. We also use mRNA transfection to facilitate low and transient expression of modified and unmodified versions of Cas9. Although the frequency of homologous recombination was similar for SpCas9-Gem and SpCas9, we observed a marked reduction in the capacity for SpCas9-Gem to induce NHEJ-mediated indels at the target locus. Moreover, in contrast to native SpCas9, we demonstrate that transient SpCas9-Gem expression enables reliable generation of both knockin reporter cell lines and genetically repaired patient-specific induced pluripotent stem cell lines free of unwanted mutations at the targeted locus.


Subject(s)
CRISPR-Cas Systems , Gene Knock-In Techniques , Pluripotent Stem Cells/metabolism , Targeted Gene Repair , Base Sequence , Cell Line , Cellular Reprogramming/genetics , DNA End-Joining Repair , Fibroblasts/cytology , Fibroblasts/metabolism , Geminin/genetics , Geminin/metabolism , Gene Expression , Genes, Reporter , Humans , INDEL Mutation , Pluripotent Stem Cells/cytology , Sequence Analysis, DNA , Transfection
5.
F1000Res ; 42015.
Article in English | MEDLINE | ID: mdl-26918126

ABSTRACT

The rapid advances in the field of genome editing using targeted endonucleases have called considerable attention to the potential of this technology for human gene therapy. Targeted correction of disease-causing mutations could ensure lifelong, tissue-specific expression of the relevant gene, thereby alleviating or resolving a specific disease phenotype. In this review, we aim to explore the potential of this technology for the therapy of ß-thalassemia. This blood disorder is caused by mutations in the gene encoding the ß-globin chain of hemoglobin, leading to severe anemia in affected patients. Curative allogeneic bone marrow transplantation is available only to a small subset of patients, leaving the majority of patients dependent on regular blood transfusions and iron chelation therapy. The transfer of gene-corrected autologous hematopoietic stem cells could provide a therapeutic alternative, as recent results from gene therapy trials using a lentiviral gene addition approach have demonstrated. Genome editing has the potential to further advance this approach as it eliminates the need for semi-randomly integrating viral vectors and their associated risk of insertional mutagenesis. In the following pages we will highlight the advantages and risks of genome editing compared to standard therapy for ß-thalassemia and elaborate on lessons learned from recent gene therapy trials.

6.
J Immunol ; 188(4): 1583-91, 2012 Feb 15.
Article in English | MEDLINE | ID: mdl-22231699

ABSTRACT

Dendritic cells (DCs) not only exhibit the unique capacity to evoke primary immune responses, but may also acquire TLR-triggered cytotoxic activity. We and others have previously shown that TLR7/8- and TLR9-stimulated plasmacytoid DCs (pDCs) isolated from human peripheral blood express the effector molecule TRAIL. The exact mechanisms through which pDCs acquire and elicit their cytotoxic activity are still not clear. We now show that in the absence of costimulators, TRAIL induction on pDCs occurs with agonists to intracellular TLRs only and is accompanied by a phenotypic as well as functional maturation, as evidenced by a comparatively superior MLR stimulatory capacity. pDCs acquired TRAIL in an IFN-α/ß-dependent fashion and, notably, TRAIL expression on pDCs could be induced by IFN-α stimulation alone. At a functional level, both TLR7/8- (imiquimod [IMQ]) and TLR9-stimulated (CpG2216) pDCs lysed Jurkat T cells in a TRAIL- and cell contact-dependent fashion. More importantly, IFN-α-activated pDCs acquired similar cytotoxic properties, independent of TLR stimulation and maturation. Both IMQ- and IFN-α-activated pDCs could also lyse certain melanoma cell lines in a TRAIL-dependent fashion. Interestingly, suboptimal doses of IMQ and IFN-α exhibited synergistic action, leading to optimal TRAIL expression and melanoma cell lysis by pDCs. Our data imply that tumor immunity in patients receiving adjuvant IMQ and/or IFN-α may involve the active participation of cytotoxic pDCs.


Subject(s)
Aminoquinolines/pharmacology , Dendritic Cells/immunology , Interferon-alpha/immunology , Neoplasms/immunology , TNF-Related Apoptosis-Inducing Ligand/immunology , Cell Line, Tumor , Dendritic Cells/metabolism , Humans , Imiquimod , Interferon Inducers/pharmacology , Interferon-alpha/biosynthesis , Interferon-alpha/metabolism , Jurkat Cells , Melanoma , TNF-Related Apoptosis-Inducing Ligand/biosynthesis , TNF-Related Apoptosis-Inducing Ligand/metabolism , Toll-Like Receptor 7/immunology , Toll-Like Receptor 7/metabolism , Toll-Like Receptor 8/immunology , Toll-Like Receptor 8/metabolism , Toll-Like Receptor 9/immunology , Toll-Like Receptor 9/metabolism
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