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1.
Front Microbiol ; 13: 1078972, 2022.
Article in English | MEDLINE | ID: mdl-36620034

ABSTRACT

Cyclins are a family of proteins characterized by possessing a cyclin box domain that mediates binding to cyclin dependent kinases (CDKs) partners. In this study, the search for a partner cyclin of the PHO85-1 CDK retrieved PCL-1 an ortholog of yeast Pcls (for Pho85 cyclins) that performs functions common to Pcls belonging to different cyclin families. We show here that PCL-1, as a typical cyclin, is involved in cell cycle control and cell progression. In addition, PCL-1 regulates glycogen metabolism; Δpcl-1 cells accumulate higher glycogen levels than wild-type cells and the glycogen synthase (GSN) enzyme is less phosphorylated and, therefore, more active in the mutant cells. Together with PHO85-1, PCL-1 phosphorylates in vitro GSN at the Ser636 amino acid residue. Modeling studies identified PHO85-1 and PCL-1 as a CDK/cyclin complex, with a conserved intermolecular region stabilized by hydrophobic and polar interactions. PCL-1 is also involved in calcium and NaCl stress response. Δpcl-1 cells are sensitive to high NaCl concentration; on the contrary, they grow better and overexpress calcium responsive genes under high calcium chloride concentration compared to the wild-type strain. The expression of the calcium-responsive CRZ-1 transcription factor is modulated by PCL-1, and this transcription factor seems to be less phosphorylated in Δpcl-1 cells since exhibits nuclear location in these cells in the absence of calcium. Our results show that PCL-1 locates at different cell regions suggesting that it may determine its activity by controlling its intracellular location and reveal an interesting functional divergence between yeast and filamentous fungus cyclins.

2.
Trends Parasitol ; 38(1): 80-94, 2022 01.
Article in English | MEDLINE | ID: mdl-34364805

ABSTRACT

Parasitic diseases affect millions of individuals worldwide, mainly in low-income regions. There is no cure for most of these diseases, and the treatment relies on drugs that have side effects and lead to drug resistance, emphasizing the urgency to find new treatments. Snake venom has been gaining prominence as a rich source of molecules with antiparasitic potentials, such as phospholipases A2 (PLA2s). Here, we compile the findings involving PLA2s with antiparasitic activities against helminths, Plasmodium, Toxoplasma, and trypanosomatids. We indicate their molecular features, highlighting the possible antiparasitic mechanisms of action of these proteins. We also demonstrate interactions between PLA2s and some parasite membrane components, shedding light on potential targets for drug design that may provide better treatment for the illnesses caused by parasites.


Subject(s)
Antiparasitic Agents , Snake Venoms , Antiparasitic Agents/pharmacology , Humans , Phospholipases A2/pharmacology , Polyesters , Snake Venoms/pharmacology
3.
Nat Commun ; 12(1): 3938, 2021 06 24.
Article in English | MEDLINE | ID: mdl-34168117

ABSTRACT

The membrane is an integral component of the G protein-coupled receptor signaling machinery. Here we demonstrate that lipids regulate the signaling efficacy and selectivity of the ghrelin receptor GHSR through specific interactions and bulk effects. We find that PIP2 shifts the conformational equilibrium of GHSR away from its inactive state, favoring basal and agonist-induced G protein activation. This occurs because of a preferential binding of PIP2 to specific intracellular sites in the receptor active state. Another lipid, GM3, also binds GHSR and favors G protein activation, but mostly in a ghrelin-dependent manner. Finally, we find that not only selective interactions but also the thickness of the bilayer reshapes the conformational repertoire of GHSR, with direct consequences on G protein selectivity. Taken together, this data illuminates the multifaceted role of the membrane components as allosteric modulators of how ghrelin signal could be propagated.


Subject(s)
Phosphatidylinositol 4,5-Diphosphate/metabolism , Receptors, Ghrelin/chemistry , Receptors, Ghrelin/metabolism , Allosteric Regulation , Binding Sites , Cell Membrane/chemistry , Cell Membrane/metabolism , Cysteine/genetics , Fluorescence Resonance Energy Transfer , G(M3) Ganglioside/metabolism , Humans , Lipid Bilayers/chemistry , Lipid Bilayers/metabolism , Lipid Metabolism , Lipids/chemistry , Mutation , Phosphatidylinositol 4,5-Diphosphate/chemistry , Protein Conformation , Receptors, Ghrelin/genetics , Signal Transduction
4.
Chem Biol Interact ; 280: 8-14, 2018 Jan 25.
Article in English | MEDLINE | ID: mdl-29208359

ABSTRACT

One of the promising fields for improving the effectiveness of antimicrobial agents is their combination with efflux pump inhibitors (EPIs), which besides expanding the use of existing antibiotics. The goal of this research was to evaluate a series of aminoguanidine hydrazones (AGH's, 1-19) as antibacterial agents and NorA efflux pump inhibitors in Staphylococcus aureus strain SA-1199B. Molecular modeling and docking studies were also performed in order to explain at the molecular level the interactions of the compounds with the generated NorA efflux pump model. The MICs of the antibiotic and ethidium bromide were determined by microdilution assay in absence or presence of a subinhibitory concentration of aminoguanidine hydrazones and macrophages viability was determined through MTT assay. Bioinformatic software Swiss-Model and AutoDock 4.2 were used to perform modeling and docking studies, respectively. As results, all AGH's were able to potentiate the action for the antibiotic norfloxacin, causing MIC's reduction of 16-fold and 32-fold to ethidium bromide. In the cell viability test, the concentration of 10 µg/mL showed better results than 90% and the concentration of 1000 µg/mL showed the lowest viability, reaching a maximum of 50% for the analyzed aminoguanidine hydrazones. Molecular docking studies showed that both norfloxacin and derivative 13 were recognized by the same binding site of NorA pump, suggesting a competitive mechanism. The present work demonstrated for the first time that AGH derivatives have potential to be putative inhibitors of NorA efflux pump, showing a promising activity as an antibacterial drug development.


Subject(s)
Anti-Bacterial Agents/pharmacology , Bacterial Proteins/metabolism , Drug Resistance, Bacterial/drug effects , Enzyme Inhibitors/pharmacology , Hydrazones/chemistry , Multidrug Resistance-Associated Proteins/metabolism , Staphylococcus aureus/metabolism , Animals , Bacterial Proteins/antagonists & inhibitors , Binding Sites , Cell Line , Cell Survival/drug effects , Enzyme Inhibitors/chemistry , Enzyme Inhibitors/toxicity , Guanidines/chemistry , Hydrazones/chemical synthesis , Hydrazones/pharmacology , Mice , Microbial Sensitivity Tests , Molecular Docking Simulation , Multidrug Resistance-Associated Proteins/antagonists & inhibitors , Norfloxacin/pharmacology , Protein Structure, Tertiary , Staphylococcus aureus/drug effects , Structure-Activity Relationship
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