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1.
Int J Biol Macromol ; 86: 302-8, 2016 May.
Article in English | MEDLINE | ID: mdl-26800900

ABSTRACT

Seeds from avocado (Persea americana Miller) fruit are a waste byproduct of fruit processing. Starch from avocado seed is a potential alternative starch source. Two different extraction solvents were used to isolate starch from avocado seeds, functional and rheological characteristics measured for these starches, and comparisons made to maize starch. Avocado seed powder was suspended in a solution containing 2 mM Tris, 7.5 mM NaCl and 80 mM NaHSO3 (solvent A) or sodium bisulphite solution (1500 ppm SO2, solvent B). Solvent type had no influence (p>0.05) on starch properties. Amylose content was 15-16%. Gelatinization temperature range was 56-74 °C, peak temperature was 65.7 °C, and transition enthalpy was 11.4-11.6J/g. At 90 °C, solubility was 19-20%, swelling power 28-30 g water/g starch, and water absorption capacity was 22-24 g water/g starch. Pasting properties were initial temperature 72 °C; maximum viscosity 380-390 BU; breakdown -2 BU; consistency 200 BU; and setback 198 BU. Avocado seed starch dispersions (5% w/v) were characterized as viscoelastic systems, with G'>G″. Avocado seed starch has potential applications as a thickening and gelling agent in food systems, as a vehicle in pharmaceutical systems and an ingredient in biodegradable polymers for food packaging.


Subject(s)
Chemical Phenomena , Persea/chemistry , Seeds/chemistry , Starch/chemistry , Starch/isolation & purification , Amylose/analysis , Solubility , Temperature , Water/chemistry
2.
Int J Mol Sci ; 13(8): 10010-10021, 2012.
Article in English | MEDLINE | ID: mdl-22949845

ABSTRACT

All the members of the triosephosphate isomerase (TIM) family possess a cystein residue (Cys126) located near the catalytically essential Glu165. The evolutionarily conserved Cys126, however, does not seem to play a significant role in the catalytic activity. On the other hand, substitution of this residue by other amino acid residues destabilizes the dimeric enzyme, especially when Cys is replaced by Ser. In trying to assess the origin of this destabilization we have determined the crystal structure of Saccharomyces cerevisiae TIM (ScTIM) at 1.86 Å resolution in the presence of PGA, which is only bound to one subunit. Comparisons of the wild type and mutant structures reveal that a change in the orientation of the Ser hydroxyl group, with respect to the Cys sulfhydryl group, leads to penetration of water molecules and apparent destabilization of residues 132-138. The latter results were confirmed by means of Molecular Dynamics, which showed that this region, in the mutated enzyme, collapses at about 70 ns.


Subject(s)
Cysteine/genetics , Mutation/genetics , Saccharomyces cerevisiae/enzymology , Serine/genetics , Triose-Phosphate Isomerase/chemistry , Binding Sites , Catalysis , Crystallography, X-Ray , Cysteine/chemistry , Cysteine/metabolism , Kinetics , Models, Molecular , Molecular Dynamics Simulation , Protein Conformation , Saccharomyces cerevisiae/genetics , Serine/chemistry , Serine/metabolism , Triose-Phosphate Isomerase/genetics , Triose-Phosphate Isomerase/metabolism
3.
J Microbiol Biotechnol ; 22(3): 292-300, 2012 Mar.
Article in English | MEDLINE | ID: mdl-22450783

ABSTRACT

We report the expression, purification, and characterization of L-asparaginase (AnsA) from Rhizobium etli. The enzyme was purified to homogeneity in a single-step procedure involving affinity chromatography, and the kinetic parameters K(m), V(max), and k(cat) for L-asparagine were determined. The enzymatic activity in the presence of a number of substrates and metal ions was investigated. The molecular mass of the enzyme was 47 kDa by SDS-PAGE. The enzyme showed a maximal activity at 50 degrees C, but the optimal temperature of activity was 37 degrees C. It also showed maximal and optimal activities at pH 9.0. The values of K(m), V(max), k(cat), and k(cat)/K(m) were 8.9 +/- 0.967 × 10⁻³ M, 128 +/- 2.8 U/mg protein, 106 +/- 2 s⁻¹, and 1.2 +/- 0.105 × 104 M⁻¹s⁻¹, respectively. The L-asparaginase activity was reduced in the presence of Mn²âº, Zn²âº, Ca²âº, and Mg²âº metal ions for about 52% to 31%. In addition, we found that NH4⁺, L-Asp, D-Asn, and beta-aspartyl-hydroxamate in the reaction buffer reduced the activity of the enzyme, whereas L-Gln did not modify its enzymatic activity. This is the first report on the expression and characterization of the L-asparaginase (AnsA) from R. etli. Phylogenetic analysis of asparaginases reveals an increasing group of known sequences of the Rhizobialtype asparaginase II family.


Subject(s)
Asparaginase/chemistry , Bacterial Proteins/chemistry , Rhizobium etli/enzymology , Amino Acid Sequence , Asparaginase/genetics , Asparaginase/isolation & purification , Asparaginase/metabolism , Bacterial Proteins/genetics , Bacterial Proteins/isolation & purification , Bacterial Proteins/metabolism , Enzyme Stability , Kinetics , Molecular Sequence Data , Molecular Weight , Phylogeny , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Rhizobium/classification , Rhizobium/enzymology , Rhizobium/genetics , Rhizobium etli/chemistry , Rhizobium etli/classification , Rhizobium etli/genetics , Substrate Specificity
4.
Molecules ; 16(2): 1253-70, 2011 Jan 28.
Article in English | MEDLINE | ID: mdl-21278678

ABSTRACT

Capsaicin is a unique alkaloid found primarily in the fruit of the Capsicum genus and is what provides its spicy flavor. Generally extracted directly from fruit, high demand has driven the use of established methods to increase production through extraction and characterization. Over time these methods have improved, usually be applying existing techniques in conjunction. An increasingly wide range of potential applications has increased interest in capsaicin. Especially compelling are the promising results of medical studies showing possible beneficial effects in many diseases. Capsaicin's pungency has limited its use in clinical trials to support its biological activity. Characterization and extraction/ synthesis of non-pungent analogues is in progress. A review is made of capsaicin research focusing mainly on its production, synthesis, characterization and pharmacology, including some of its main potential clinical uses in humans.


Subject(s)
Capsaicin/chemistry , Capsaicin/pharmacology , Animals , Capsaicin/analogs & derivatives , Capsaicin/chemical synthesis , Capsaicin/metabolism , Capsicum/chemistry , Fruit/chemistry , Gastrointestinal Tract/drug effects , Humans , Molecular Structure
5.
Biochemistry ; 43(11): 3255-63, 2004 Mar 23.
Article in English | MEDLINE | ID: mdl-15023076

ABSTRACT

In triosephosphate isomerase, Cys126 is a conserved residue located close to the catalytic glutamate, Glu165. Although it has been mentioned that Cys126 and other nearby residues are required to maintain the active site geometry optimal for catalysis, no evidence supporting this idea has been reported to date. In this work, we studied the catalytic and stability properties of mutants C126A and C126S of Saccharomyces cerevisiae TIM (wtTIM). None of these amino acid replacements induced significant changes in the folding of wtTIM, as indicated by spectroscopic studies. C126S and C126A have K(M) and k(cat) values that are concomitantly reduced by only 4-fold and 1.5-fold, respectively, compared to those of wtTIM; in either case, however, the catalytic efficiency (k(cat)/K(M)) of the enzyme is barely affected. The affinity of mutated TIMs for the competitive inhibitor 2-phosphoglycolate augmented also slightly. In contrast, greater susceptibility to thermal denaturation resulted from mutation of Cys126, especially when it was changed to Ser. By using values of the rate constants for unfolding and refolding, we estimated that, at 25 degrees C, C126A and C126S are less stable than wtTIM by about 5.0 and 9.0 kcal mol(-)(1), respectively. Moreover, either of these mutations slows down the folding rate by a factor of 10 and decreases the recovery of the active enzyme after thermal unfolding. Thus, Cys126 is required for proper stability and efficient folding of TIM rather than for enzymatic catalysis.


Subject(s)
Conserved Sequence , Cysteine/chemistry , Protein Folding , Saccharomyces cerevisiae Proteins/chemistry , Triose-Phosphate Isomerase/chemistry , Amino Acid Substitution/genetics , Binding Sites/genetics , Catalysis , Conserved Sequence/genetics , Cysteine/genetics , Enzyme Activation/genetics , Enzyme Stability/genetics , Glycolates/chemistry , Hot Temperature , Kinetics , Models, Chemical , Mutagenesis, Site-Directed , Protein Binding/genetics , Protein Denaturation/genetics , Protein Renaturation , Saccharomyces cerevisiae Proteins/biosynthesis , Saccharomyces cerevisiae Proteins/genetics , Triose-Phosphate Isomerase/biosynthesis , Triose-Phosphate Isomerase/genetics
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