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1.
Biophys J ; 120(20): 4349-4359, 2021 10 19.
Article in English | MEDLINE | ID: mdl-34509509

ABSTRACT

Conversion of integrins from low to high affinity states, termed activation, is important in biological processes, including immunity, hemostasis, angiogenesis, and embryonic development. Integrin activation is regulated by large-scale conformational transitions from closed, low affinity states to open, high affinity states. Although it has been suggested that substrate stiffness shifts the conformational equilibrium of integrin and governs its unbinding, here, we address the role of integrin conformational activation in cellular mechanosensing. Comparison of wild-type versus activating mutants of integrin αVß3 show that activating mutants shift cell spreading, focal adhesion kinase activation, traction stress, and force on talin toward high stiffness values at lower stiffness. Although all activated integrin mutants showed equivalent binding affinity for soluble ligands, the ß3 S243E mutant showed the strongest shift in mechanical responses. To understand this behavior, we used coarse-grained computational models derived from molecular level information. The models predicted that wild-type integrin αVß3 displaces under force and that activating mutations shift the required force toward lower values, with S243E showing the strongest effect. Cellular stiffness sensing thus correlates with computed effects of force on integrin conformation. Together, these data identify a role for force-induced integrin conformational deformation in cellular mechanosensing.


Subject(s)
Integrins , Talin , Cell Adhesion , Integrin alphaVbeta3/metabolism , Integrins/genetics , Ligands , Mechanical Phenomena , Protein Binding , Talin/metabolism
2.
Biophys J ; 120(9): 1578-1591, 2021 05 04.
Article in English | MEDLINE | ID: mdl-33631203

ABSTRACT

During actin-based cell migration, the actin cytoskeleton in the lamellipodium both generates and responds to force, which has functional consequences for the ability of the cell to extend protrusions. However, the material properties of the lamellipodial actin network and its response to stress on the timescale of motility are incompletely understood. Here, we describe a dynamic wrinkling phenotype in the lamellipodium of fish keratocytes, in which the actin sheet buckles upward away from the ventral membrane of the cell, forming a periodic pattern of wrinkles perpendicular to the cell's leading edge. Cells maintain an approximately constant wrinkle wavelength over time despite new wrinkle formation and the lateral movement of wrinkles in the cell frame of reference, suggesting that cells have a preferred or characteristic wrinkle wavelength. Generation of wrinkles is dependent upon myosin contractility, and their wavelength scales directly with the density of the actin network and inversely with cell adhesion. These results are consistent with a simple physical model for wrinkling in an elastic sheet under compression and suggest that the lamellipodial cytoskeleton behaves as an elastic material on the timescale of cell migration despite rapid actin turnover.


Subject(s)
Myosins , Pseudopodia , Actins , Animals , Cell Movement , Cytoskeleton
3.
Cell Syst ; 11(3): 286-299.e4, 2020 09 23.
Article in English | MEDLINE | ID: mdl-32916096

ABSTRACT

Motile cells navigate complex environments by changing their direction of travel, generating left-right asymmetries in their mechanical subsystems to physically turn. Currently, little is known about how external directional cues are propagated along the length scale of the whole cell and integrated with its force-generating apparatus to steer migration mechanically. We examine the mechanics of spontaneous cell turning in fish epidermal keratocytes and find that the mechanical asymmetries responsible for turning behavior predominate at the rear of the cell, where there is asymmetric centripetal actin flow. Using experimental perturbations, we identify two linked feedback loops connecting myosin II contractility, adhesion strength and actin network flow in turning cells that are sufficient to explain the observed cell shapes and trajectories. Notably, asymmetries in actin polymerization at the cell leading edge play only a minor role in the mechanics of cell turning-that is, cells steer from the rear.


Subject(s)
Cell Movement/physiology , Cell Shape/physiology , Models, Biological , Humans
4.
Small ; 15(45): e1904203, 2019 11.
Article in English | MEDLINE | ID: mdl-31482695

ABSTRACT

Nerve growth factor (NGF) plays a vital role in reducing the loss of cholinergic neurons in Alzheimer's disease (AD). However, its delivery to the brain remains a challenge. Herein, NGF is loaded into degradable oxidized porous silicon (PSiO2 ) carriers, which are designed to carry and continuously release the protein over a 1 month period. The released NGF exhibits a substantial neuroprotective effect in differentiated rat pheochromocytoma PC12 cells against amyloid-beta (Aß)-induced cytotoxicity, which is associated with Alzheimer's disease. Next, two potential localized administration routes of the porous carriers into murine brain are investigated: implantation of PSiO2 chips above the dura mater, and biolistic bombardment of PSiO2 microparticles through an opening in the skull using a pneumatic gene gun. The PSiO2 -implanted mice are monitored for a period of 8 weeks and no inflammation or adverse effects are observed. Subsequently, a successful biolistic delivery of these highly porous microparticles into a live-mouse brain is demonstrated for the first time. The bombarded microparticles are observed to penetrate the brain and reach a depth of 150 µm. These results pave the way for using degradable PSiO2 carriers as potential localized delivery systems for NGF to the brain.


Subject(s)
Alzheimer Disease/drug therapy , Alzheimer Disease/metabolism , Brain/metabolism , Nanostructures/chemistry , Nerve Growth Factor/chemistry , Nerve Growth Factor/therapeutic use , Silicon/chemistry , Animals , Cell Survival/drug effects , Mice , Microscopy, Confocal , Microscopy, Fluorescence , Nanostructures/therapeutic use , Nerve Growth Factor/pharmacokinetics , PC12 Cells , Porosity , Rats , X-Ray Microtomography
5.
Nature ; 560(7719): E31, 2018 08.
Article in English | MEDLINE | ID: mdl-29973728

ABSTRACT

Change history: In this Letter, Alexander Groisman should have been listed as an author. This error has been corrected online.

6.
Nature ; 557(7703): 86-91, 2018 05.
Article in English | MEDLINE | ID: mdl-29720635

ABSTRACT

The formation of condensed matter typically involves a trade-off between structural order and flexibility. As the extent and directionality of interactions between atomic or molecular components increase, materials generally become more ordered but less compliant, and vice versa. Nevertheless, high levels of structural order and flexibility are not necessarily mutually exclusive; there are many biological (such as microtubules1,2, flagella 3 , viruses4,5) and synthetic assemblies (for example, dynamic molecular crystals6-9 and frameworks10-13) that can undergo considerable structural transformations without losing their crystalline order and that have remarkable mechanical properties8,14,15 that are useful in diverse applications, such as selective sorption 16 , separation 17 , sensing 18 and mechanoactuation 19 . However, the extent of structural changes and the elasticity of such flexible crystals are constrained by the necessity to maintain a continuous network of bonding interactions between the constituents of the lattice. Consequently, even the most dynamic porous materials tend to be brittle and isolated as microcrystalline powders 14 , whereas flexible organic or inorganic molecular crystals cannot expand without fracturing. Owing to their rigidity, crystalline materials rarely display self-healing behaviour 20 . Here we report that macromolecular ferritin crystals with integrated hydrogel polymers can isotropically expand to 180 per cent of their original dimensions and more than 500 per cent of their original volume while retaining periodic order and faceted Wulff morphologies. Even after the separation of neighbouring ferritin molecules by 50 ångströms upon lattice expansion, specific molecular contacts between them can be reformed upon lattice contraction, resulting in the recovery of atomic-level periodicity and the highest-resolution ferritin structure reported so far. Dynamic bonding interactions between the hydrogel network and the ferritin molecules endow the crystals with the ability to resist fragmentation and self-heal efficiently, whereas the chemical tailorability of the ferritin molecules enables the creation of chemically and mechanically differentiated domains within single crystals.

7.
Proc Natl Acad Sci U S A ; 114(41): 10888-10893, 2017 10 10.
Article in English | MEDLINE | ID: mdl-28973880

ABSTRACT

Asexual freshwater planarians reproduce by tearing themselves into two pieces by a process called binary fission. The resulting head and tail pieces regenerate within about a week, forming two new worms. Understanding this process of ripping oneself into two parts poses a challenging biomechanical problem. Because planarians stop "doing it" at the slightest disturbance, this remained a centuries-old puzzle. We focus on Dugesia japonica fission and show that it proceeds in three stages: a local constriction ("waist formation"), pulsation-which increases waist longitudinal stresses-and transverse rupture. We developed a linear mechanical model with a planarian represented by a thin shell. The model fully captures the pulsation dynamics leading to rupture and reproduces empirical time scales and stresses. It asserts that fission execution is a mechanical process. Furthermore, we show that the location of waist formation, and thus fission, is determined by physical constraints. Together, our results demonstrate that where and how a planarian rips itself apart during asexual reproduction can be fully explained through biomechanics.


Subject(s)
Planarians/physiology , Regeneration/physiology , Reproduction, Asexual/physiology , Animals , Fresh Water , Planarians/growth & development
9.
J Cell Biol ; 213(3): 371-83, 2016 05 09.
Article in English | MEDLINE | ID: mdl-27161398

ABSTRACT

Integrin-dependent adhesions are mechanosensitive structures in which talin mediates a linkage to actin filaments either directly or indirectly by recruiting vinculin. Here, we report the development and validation of a talin tension sensor. We find that talin in focal adhesions is under tension, which is higher in peripheral than central adhesions. Tension on talin is increased by vinculin and depends mainly on actin-binding site 2 (ABS2) within the middle of the rod domain, rather than ABS3 at the far C terminus. Unlike vinculin, talin is under lower tension on soft substrates. The difference between central and peripheral adhesions requires ABS3 but not vinculin or ABS2. However, differential stiffness sensing by talin requires ABS2 but not vinculin or ABS3. These results indicate that central versus peripheral adhesions must be organized and regulated differently, and that ABS2 and ABS3 have distinct functions in spatial variations and stiffness sensing. Overall, these results shed new light on talin function and constrain models for cellular mechanosensing.


Subject(s)
Mechanotransduction, Cellular , Talin/physiology , Actin Cytoskeleton/metabolism , Animals , Binding Sites , Fluorescence Resonance Energy Transfer , Focal Adhesions , Mice , Models, Biological , NIH 3T3 Cells , Talin/metabolism , Vinculin/metabolism , Vinculin/physiology
10.
Science ; 342(6162): 1237435, 2013 Nov 29.
Article in English | MEDLINE | ID: mdl-24288338

ABSTRACT

To predict the emergence of antibiotic resistance, quantitative relations must be established between the fitness of drug-resistant organisms and the molecular mechanisms conferring resistance. These relations are often unknown and may depend on the state of bacterial growth. To bridge this gap, we have investigated Escherichia coli strains expressing resistance to translation-inhibiting antibiotics. We show that resistance expression and drug inhibition are linked in a positive feedback loop arising from an innate, global effect of drug-inhibited growth on gene expression. A quantitative model of bacterial growth based on this innate feedback accurately predicts the rich phenomena observed: a plateau-shaped fitness landscape, with an abrupt drop in the growth rates of cultures at a threshold drug concentration, and the coexistence of growing and nongrowing populations, that is, growth bistability, below the threshold.


Subject(s)
Adaptation, Physiological , Drug Resistance, Bacterial , Escherichia coli/drug effects , Escherichia coli/growth & development , Genetic Fitness , Protein Synthesis Inhibitors/pharmacology , Chloramphenicol/metabolism , Chloramphenicol/pharmacology , Chloramphenicol O-Acetyltransferase/biosynthesis , Escherichia coli/genetics , Gene Expression Regulation, Bacterial/drug effects , Models, Biological , Protein Biosynthesis/drug effects , Protein Synthesis Inhibitors/metabolism
11.
Mol Syst Biol ; 8: 616, 2012.
Article in English | MEDLINE | ID: mdl-23010999

ABSTRACT

The efficient sequestration of nutrients is vital for the growth and survival of microorganisms. Some nutrients, such as CO2 and NH3, are readily diffusible across the cell membrane. The large membrane permeability of these nutrients obviates the need of transporters when the ambient level is high. When the ambient level is low, however, maintaining a high intracellular nutrient level against passive back diffusion is both challenging and costly. Here, we study the delicate management of ammonium (NH4+/NH3) sequestration by E. coli cells using microfluidic chemostats. We find that as the ambient ammonium concentration is reduced, E. coli cells first maximize their ability to assimilate the gaseous NH3 diffusing into the cytoplasm and then abruptly activate ammonium transport. The onset of transport varies under different growth conditions, but always occurring just as needed to maintain growth. Quantitative modeling of known interactions reveals an integral feedback mechanism by which this need-based uptake strategy is implemented. This novel strategy ensures that the expensive cost of upholding the internal ammonium concentration against back diffusion is kept at a minimum.


Subject(s)
Escherichia coli/metabolism , Quaternary Ammonium Compounds/metabolism , Cation Transport Proteins/metabolism , Escherichia coli/cytology , Escherichia coli/genetics , Escherichia coli/growth & development , Escherichia coli Proteins/metabolism , Feedback, Physiological/drug effects , Gene Expression Regulation, Bacterial/drug effects , Glutamate-Ammonia Ligase/metabolism , Glutamine/pharmacology , Models, Biological , Nitrogen/metabolism , Quaternary Ammonium Compounds/pharmacology , Up-Regulation/drug effects
12.
Nat Methods ; 7(10): 821-4, 2010 Oct.
Article in English | MEDLINE | ID: mdl-20871617

ABSTRACT

We introduce quantitative dynamic footprinting microscopy to resolve neutrophil rolling on P-selectin. We observed that the footprint of a rolling neutrophil was fourfold larger than previously thought, and that P-selectin-PSGL-1 bonds were relaxed at the leading edge of the rolling cell, compressed under the cell center, and stretched at the trailing edge. Each rolling neutrophil formed three to four long tethers that extended up to 16 µm behind the rolling cell.


Subject(s)
Leukocyte Rolling/physiology , Membrane Glycoproteins/genetics , Microscopy, Fluorescence/methods , Neutrophils/physiology , P-Selectin/genetics , Protein Footprinting/methods , Animals , Green Fluorescent Proteins/genetics , Mice , Mice, Transgenic , Microfluidic Analytical Techniques/instrumentation , Microfluidic Analytical Techniques/methods , Microscopy, Fluorescence/instrumentation , Muramidase/genetics , Neutrophils/metabolism , Neutrophils/ultrastructure , Protein Footprinting/instrumentation
13.
Methods Enzymol ; 445: 255-79, 2008.
Article in English | MEDLINE | ID: mdl-19022063

ABSTRACT

Intravital microscopy is a method to study the microcirculation in living tissues. Transillumination, oblique reflected light illumination, continuous and stroboscopic epifluorescence microscopy can be used to visualized specific cells and molecules. Intravital microscopy is further enhanced by the advent of laser scanning.spinning disk confocal and multi-photon microscopy. Recent advances include blood-perfused flow chambers and microfluidic devises for the study of blood cell interactions with molecularly defined substrates. This chapter focuses on the application of these techniques to study leukocyte interactions with the vascular wall and molecular surfaces.


Subject(s)
Endothelium, Vascular/cytology , Leukocytes/cytology , Leukocytes/physiology , Microcirculation/physiology , Animals , Cell Adhesion/physiology , Cell Communication/physiology , Endothelium, Vascular/physiology , Humans , Microscopy, Fluorescence/methods
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