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1.
J Biomol Screen ; 20(10): 1268-76, 2015 Dec.
Article in English | MEDLINE | ID: mdl-26160832

ABSTRACT

The everlasting pharmacological development is continuously producing new substances with potential doping abuse. Among these, secretagogues are very prone to misuse by athletes for their properties to release growth hormone (GH) and some limitations in the actual analytical methods to detect them. In this paper, an in-depth study on the key variables of the radio receptor method previously developed by our group is performed and a fit-for-purpose protocol is established. Thus, this sensitive and robust screening method is proposed as an intelligent and preventive antidoping method to detect new growth hormone secretagogues (GHSs) in exceptional suspicious urine samples obtained from athletes and will support the current detection methods based on liquid chromatography-mass spectrometry (LC-MS).


Subject(s)
Doping in Sports , Glycoproteins/urine , Growth Hormone/urine , Performance-Enhancing Substances/urine , Binding, Competitive , Chromatography, Liquid , Gas Chromatography-Mass Spectrometry , Ghrelin/metabolism , HEK293 Cells , Humans , Mass Spectrometry , Receptors, Ghrelin/metabolism
2.
J Thromb Haemost ; 12(7): 1131-40, 2014 Jul.
Article in English | MEDLINE | ID: mdl-24824609

ABSTRACT

BACKGROUND: The characterization of natural mutants identified in patients with antithrombin deficiency has helped to identify functional domains or regions of this key anticoagulant and the mechanisms involved in the deficiency, as well as to define the clinical prognosis. Recently, we described an abnormal glycosylation in a pleiotropic mutant (K241E) that explained the impaired heparin affinity and the mild risk of thrombosis in carriers. OBJECTIVES: To evaluate the effects of different natural pleiotropic mutations on the glycosylation of antithrombin and their functional effects. METHODS: Five pleiotropic mutations identified in patients with antithrombin deficiency and located at each one of the strands of the C-sheet were selected (K241E, M251I, M315K, F402L, and P429L). Recombinant mutants were generated and purified. Glycoform heterogeneity and conformational sensitivity were studied with electrophoresis, proteomic analysis, and glycomic analysis. Heparin affinity was evaluated from intrinsic fluorescence. Reactivity assays with factor Xa, thrombin and neutrophil elastase in the presence or absence of heparin were also performed. RESULTS AND CONCLUSIONS: Pleiotropic mutants, except for that with the M315K mutation, which affects a non-exposed residue, showed two glycoforms. Variant 1, with abnormal glycosylation, had reduced heparin affinity and severely affected reactivity with the target proteases. In contrast, variant 2, with similar electrophoretic mobility and heparin affinity to wild-type antithrombin, had impaired inhibitory activity that was partially compensated for by activation with heparin. Our results suggest the C-sheet of antithrombin as a new region that is relevant for proper maturation of the N-glycans. Therefore, pleiotropic mutations lead to glycosylation defects that are responsible for the reduced heparin affinity.


Subject(s)
Antithrombin III Deficiency/genetics , Antithrombins/chemistry , Mutation , Polysaccharides/chemistry , Adolescent , Adult , Antithrombin III Deficiency/metabolism , Electrophoresis , Glycosylation , Heparin/chemistry , Heterozygote , Humans , Leukocyte Elastase/metabolism , Middle Aged , Mutagenesis, Site-Directed , Prognosis , Protein Structure, Tertiary , Proteomics , Recombinant Proteins/chemistry , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Thrombin/chemistry , Thrombosis/genetics
3.
Analyst ; 139(12): 2944-67, 2014 Jun 21.
Article in English | MEDLINE | ID: mdl-24779027

ABSTRACT

Carbohydrates fulfil many common as well as extremely important functions in nature. They show a variety of molecular displays--e.g., free mono-, oligo-, and polysaccharides, glycolipids, proteoglycans, glycoproteins, etc.--with particular roles and localizations in living organisms. Structure-specific peculiarities are so many and diverse that it becomes virtually impossible to cover them all from an analytical perspective. Hence this manuscript, focused on mammalian glycosylation, rather than a complete list of analytical descriptors or recognized functions for carbohydrate structures, comprehensively reviews three central issues in current glycoscience, namely (i) structural analysis of glycoprotein glycans, covering both classical and novel approaches for teasing out the structural puzzle as well as potential pitfalls of these processes; (ii) an overview of functions attributed to carbohydrates, covering from monosaccharide to complex, well-defined epitopes and full glycans, including post-glycosylational modifications, and (iii) recent technical advances allowing structural identification of glycoprotein glycans with simultaneous assignation of biological functions.


Subject(s)
Proteins/metabolism , Animals , Glycosylation , Mammals , Proteins/chemistry , Structure-Activity Relationship
4.
Anal Chim Acta ; 745: 118-23, 2012 Oct 01.
Article in English | MEDLINE | ID: mdl-22938615

ABSTRACT

Human growth hormone (hGH) abuse in sport is a challenge at present. The current strategy used, known as direct method, is based on the quantification of hGH variants in serum. An alternative strategy, known as indirect method, focuses on serum markers such as insulin-like growth factor I (IGF-I) and procollagen type III N-terminal propeptide (P-III-NP). The indirect method allows a longer window of detection (WOO) of hGH abuse. To evaluate the performance of the indirect method, in parallel to the direct method, a clinical trial with recombinant hGH (rhGH) was conducted on healthy male subjects during 7 days (0.026 mg(-1) kg(-1) person(-1) day(-1)). The data were fit to the discriminant formula proposed in the previously published GH-2000 project. The low sensitivity of the scores, judged from the high number of false negative outcomes, imposed a new discriminant analysis, standarised using local population subjects demographically similar to the ones of the study. The sensitivity of the method significantly increased, highlighting the importance of the standardisation. The indirect method allowed extended window of opportunity (WOO), although two false positive evaluations were observed derived from elevated basal IGF-I and P-III-NP concentrations stressing the need for an independent confirmation method. When direct and indirect methods were combined the best selectivity and sensitivity were achieved.


Subject(s)
Doping in Sports , Human Growth Hormone/blood , Insulin-Like Growth Factor I/analysis , Peptide Fragments/blood , Performance-Enhancing Substances/blood , Procollagen/blood , Recombinant Proteins/blood , Adult , Biomarkers/blood , Discriminant Analysis , Female , Human Growth Hormone/administration & dosage , Humans , Immunoassay , Male , Recombinant Proteins/administration & dosage , Reproducibility of Results , Sensitivity and Specificity
5.
J Proteomics ; 75(18): 5920-35, 2012 Oct 22.
Article in English | MEDLINE | ID: mdl-22842159

ABSTRACT

The zona pellucida (ZP) participates in sperm-egg interactions during the first steps of fertilization. Recent studies have shown that the ZP matrix of oocytes in several species is composed of four glycoproteins, designated as ZP1, ZP2, ZP3 and ZP4, rather than the three described in mouse, pig and cow. In this study, investigations were carried out to unveil a fourth glycoprotein in the rabbit (Oryctolagus cuniculus) ZP. Using total RNA isolated from rabbit ovaries, the complementary deoxyribonucleic acid (cDNA) encoding rabbit ZP1 was amplified by reverse transcribed polymerase chain reaction (RT-PCR). The ZP1 cDNA contains an open reading frame of 1825 nucleotides encoding a polypeptide of 608 amino acid residues. The deduced amino acid sequence of rabbit ZP1 showed high identity with other species: 70% identity with human and horse ZP1, and 67% identity with mouse and rat ZP1. At the proteomic level, peptides corresponding to the four proteins were detected by mass spectrometry. In addition, a molecular phylogenetic analysis of ZP1 showed that pseudogenization of this gene has occurred at least four times during the evolution of mammals. The data presented in this manuscript provide evidence, for the first time, that the rabbit ZP is composed of four glycoproteins.


Subject(s)
Egg Proteins/analysis , Membrane Glycoproteins/analysis , Receptors, Cell Surface/analysis , Zona Pellucida/chemistry , Amino Acid Sequence , Animals , Base Sequence , Chromatography, High Pressure Liquid , Egg Proteins/genetics , Egg Proteins/isolation & purification , Female , Glycoproteins/analysis , Membrane Glycoproteins/genetics , Membrane Glycoproteins/isolation & purification , Molecular Sequence Data , Phylogeny , Proteomics , Pseudogenes/genetics , Rabbits , Receptors, Cell Surface/genetics , Receptors, Cell Surface/isolation & purification , Sequence Alignment , Tandem Mass Spectrometry , Zona Pellucida Glycoproteins
6.
Anal Chim Acta ; 733: 56-63, 2012 Jul 06.
Article in English | MEDLINE | ID: mdl-22704376

ABSTRACT

Detecting recombinant human growth hormone (rhGH) abuse in sport remains one of the major challenges in doping control. We have compared two different approaches to detect the hGH (human growth hormone) abuse. The first measures the concentrations of the 22 kDa hGH isoform (rec assay) and pituitary derived isoforms (pit assay) and a ratio rec/pit is obtained. The second measures the concentrations of 22 and 20 kDa hGH isoforms and also a ratio 22/20 kDa is derived. Using a single set (nine healthy male subjects, 7 days, 0.026 mg/kg/day of rhGH, 2 week wash out period) both approaches were compared. To quantify the agreement between the immunoassays, B.A. (Bland-Altman) analysis and P.r. (Pearson correlation) were used. To fully understand the assay readings, all relevant antibodies were characterised by surface plasmon resonance (SPR). In either approach the ratio numerator produces similar results and the denominator determines both signal-amplitude and time-frame of possible application. The rec vs pit approach displays a higher distinctive capacity to detect hGH abuse but the complex binding properties of the capture antibodies make it very difficult to evaluate the precise contributions of the individual hGH variants to the assay result. In the 22 vs 20 approach, the 20 kDa hGH concentration measures determine its applicability. Both approaches are based on a different principle, should be preferably applied within 24 h after rhGH administration, and are perfectly comparable given the results obtained. The reduced time frame of application indicates that their principle application should be preferably in an out-of-competition setting.


Subject(s)
Human Growth Hormone/analysis , Immunoassay/methods , Substance Abuse Detection/methods , Antibodies, Monoclonal/analysis , Antibodies, Monoclonal/immunology , Doping in Sports , Human Growth Hormone/immunology , Humans , Male , Protein Isoforms/analysis , Protein Isoforms/immunology , Recombinant Proteins/analysis , Recombinant Proteins/immunology , Single-Blind Method , Surface Plasmon Resonance
7.
Anal Bioanal Chem ; 401(2): 389-403, 2011 Aug.
Article in English | MEDLINE | ID: mdl-21448606

ABSTRACT

Doping analysis relies on the determination of prohibited substances that should not be present in the body of an athlete or that should be below a threshold value. In the case of xenobiotics their mere presence is sufficient to establish a doping offence. However, in the case of human biotics the analytical method faces the difficulty of distinguishing between endogenous and exogenous origin. For this purpose ingenious strategies have been implemented, often aided by state-of-the-art technological advancements such as mass spectrometry in all its possible forms. For larger molecules, i.e. protein hormones, the innate structural complexity, the heterogeneous nature, and the extremely low levels in biological fluids have rendered the analytical procedures heavily dependent of immunological approaches. Although approaches these confer specificity and sensitivity to the applications, most rely on the use of two, or even three, antibody incubations with the consequent increment in assay variability. Moreover, the requirement for different antibodies that separately recognise different epitopes in screening and confirmation assays further contributes to differences encountered in either measurement. The development of analytical techniques to measure interactions directly, such as atomic force microscopy, quartz crystal microbalance or surface plasmon resonance, have greatly contributed to the accurate evaluation of molecular interactions in all fields of biology, and expectations are that this will only increase. Here, an overview is provided of surface plasmon resonance, and its particular value in application to the field of doping analysis.


Subject(s)
Doping in Sports , Peptide Hormones/analysis , Substance Abuse Detection/methods , Surface Plasmon Resonance , Humans , Immunoassay , Peptide Hormones/immunology , Sensitivity and Specificity
8.
J Chromatogr B Analyt Technol Biomed Life Sci ; 878(23): 2117-22, 2010 Aug 01.
Article in English | MEDLINE | ID: mdl-20630810

ABSTRACT

A method is described to isolate human erythropoietin (hEPO) from plasma using an EPO-specific immunoaffinity micro well plate (IAP). The operating conditions of the method (binding, blocking and elution) were optimised to avoid isoform discrimination and cross-contamination with other glycoproteins. The overall hEPO recovery was ca. 56% and significant clean-up for plasmatic hEPO was achieved. Polyvinylpyrrolidone (PVP) was used as a blocking reagent and elution took place at pH 11.0. Under these conditions all isoforms from recombinant human EPOs (rhEPOs) and analogues were uniformly recovered guaranteeing lack of discrimination. The resulting procedure allowed isolating erythropoietin from plasma in conditions amenable to hEPO analysis by other techniques such as SDS-PAGE or IEF. Moreover, avoiding contamination with other glycosylated material allowed the identification in human plasma samples of the non-human N-glycolyl-neuraminic acid (Neu5Gc) using HPLC-FLD. Neu5Gc is present as 1-2% of the sialic acid content in rhEPO so this approach could be used to unequivocally detect abuse of rhEPOs or analogues as part of the doping control.


Subject(s)
Enzyme-Linked Immunosorbent Assay/instrumentation , Enzyme-Linked Immunosorbent Assay/methods , Erythropoietin/blood , Erythropoietin/isolation & purification , Chromatography, High Pressure Liquid , Humans , Isoelectric Focusing , Reference Standards
9.
Anal Biochem ; 399(2): 174-81, 2010 Apr 15.
Article in English | MEDLINE | ID: mdl-20060802

ABSTRACT

Receptor binding techniques have been widely used in different biochemical applications, with isolated membranes being the most used receptor preparation in this type of assays. In this study, intact cells were compared with isolated membranes as receptor support for radioligand receptor binding assay. The growth hormone secretagogue receptor 1a (GHSR-1a) expressed in human embryonic kidney 293 (HEK293) cells was used as a model of G-protein-coupled receptors. Differences between using intact cells in suspension and using isolated membranes were evaluated for different aspects of the receptor binding assay: total binding variations while both receptor preparations remain on ice, modifications in incubation conditions, saturation, and competition using different agonists. Intact cells are more prone to variability. Although under optimized settings both preparations were equivalent, the K(d) value for intact cells was three times higher than that using isolated membranes. However, no significant differences were observed in competition assays obtaining practically identical K(i) values for all ligands tested. For the GHSR-1a, isolated membranes are the better choice if particular incubation conditions are required (less variability), whereas intact cells yield easy, fast, and physiological conditions for receptor binding assays.


Subject(s)
Radioligand Assay/methods , Receptors, Ghrelin/metabolism , Binding, Competitive , Cell Line , Cell Membrane/chemistry , Humans , Ligands , Protein Binding , Receptors, Ghrelin/agonists , Receptors, Ghrelin/chemistry
10.
J Pharm Biomed Anal ; 51(1): 255-9, 2010 Jan 05.
Article in English | MEDLINE | ID: mdl-19716252

ABSTRACT

A screening method able to differentiate recombinant human erythropoietins (rhEPOs) and analogues like CERA from human urinary erythropoietin (uhEPO) is described. The method is based on the discrimination between isoforms observed when the protein is eluted under acidic followed by basic conditions from immunoaffinity microtiter wells. From a comparison with the complex IEF protocol currently applied in anti-doping analysis, the newly developed assay procedure is amenable to wide screening application and presents good resolving power between rhEPOs and uhEPO.


Subject(s)
Doping in Sports , Enzyme-Linked Immunosorbent Assay/methods , Erythropoietin/urine , Erythropoietin/chemistry , Humans , Hydrogen-Ion Concentration , Isoelectric Focusing/methods , Polyethylene Glycols , Protein Isoforms/chemistry , Protein Isoforms/urine , Recombinant Proteins
11.
Growth Horm IGF Res ; 19(4): 388-98, 2009 Aug.
Article in English | MEDLINE | ID: mdl-19473863

ABSTRACT

Human growth hormone (GH) represents an extremely challenging task from an anti-doping viewpoint. GH is an endogenously produced substance, present at very low levels in circulation (for the most abundant 22kDa isoform approximately 50pM in plasma and 100fM in urine) either as monomer or homo- and heterodimers, comprises a family of distinct isoforms, and obeys a pulsatile secretion routine that is affected by many different internal and external factors. Upon administration of the recombinant, single-isoform pharmaceutical, the feedback mechanism reduces the endogenous heterogeneity resulting in altered ratios between the different GH isoforms. Thus, measuring the isoform ratios through immuno assays appears the approach of choice. Conventional assays do not provide information on isoform-specific association and dissociation events of the individual primary antibody-isoform or isoform-secondary antibody interactions. This particular information can be obtained using the technology of surface plasmon resonance (SPR) which enables monitoring of biomolecular interactions in a dynamic and label-free setting. In this paper the different aspects of SPR are described, how the technology may be beneficial for understanding today's anti-GH immunoassays, and whether the approach could be employed for measuring GH in the near future.


Subject(s)
Doping in Sports , Human Growth Hormone/metabolism , Immunoassay/methods , Peptide Fragments/blood , Peptide Fragments/urine , Substance Abuse Detection/methods , Surface Plasmon Resonance/methods , Antibodies/chemistry , Biosensing Techniques , Dimerization , Human Growth Hormone/analysis , Human Growth Hormone/blood , Human Growth Hormone/urine , Humans , Kinetics , Models, Chemical , Peptide Fragments/analysis , Protein Array Analysis , Protein Binding , Protein Isoforms
12.
J Proteome Res ; 8(2): 926-41, 2009 Feb.
Article in English | MEDLINE | ID: mdl-19159282

ABSTRACT

The zona pellucida (ZP) is an extracellular glycoprotein matrix that surrounds all mammalian oocytes. Recent data have shown the presence of four glycoproteins (ZP1, ZP2, ZP3, and ZP4) in the ZP of human and rat rather than the three glycoproteins proposed in the mouse model. In the hamster (Mesocricetus auratus), it was previously described that ZP was composed of three different glycoproteins, called ZP1, ZP2, and ZP3, even though only ZP2 and ZP3 have been cloned thus far. The aim of the study was to determine whether hamster might also express four, rather than three, ZP proteins. The full-length cDNAs encoding hamster ZP glycoproteins 1 and 4 were isolated using rapid amplification cDNA ends (RACE). The cDNA of ZP1 contains an open reading frame of 1851 nucleotides encoding a polypeptide of 616 amino acid residues. The amino acid sequence of ZP1 revealed a high homology with other mammalian species like human (66%), rat (80%), and mouse (80%). The cDNA of ZP4 contains an open reading frame of 1632 nucleotides encoding a polypeptide of 543 amino acid residues. The deduced amino acid sequence of ZP4 revealed high overall homology with rat (82%) and human (78%). Subsequent mass spectrometric analysis of the hamster ZP allowed identification of peptides from all four glycoproteins. The data presented in this study provide evidence, for the first time, that the hamster ZP matrix is composed of four glycoproteins.


Subject(s)
Egg Proteins/chemistry , Membrane Glycoproteins/chemistry , Mesocricetus , Protein Isoforms/chemistry , Receptors, Cell Surface/chemistry , Zona Pellucida/chemistry , Amino Acid Sequence , Animals , Base Sequence , Cricetinae , Egg Proteins/classification , Egg Proteins/genetics , Female , Humans , Membrane Glycoproteins/classification , Membrane Glycoproteins/genetics , Mice , Molecular Sequence Data , Open Reading Frames , Phylogeny , Protein Isoforms/classification , Protein Isoforms/genetics , Rats , Receptors, Cell Surface/classification , Receptors, Cell Surface/genetics , Sequence Alignment , Zona Pellucida Glycoproteins
13.
J Mass Spectrom ; 43(7): 936-48, 2008 Jul.
Article in English | MEDLINE | ID: mdl-18563855

ABSTRACT

Doping with (glyco)protein hormones represent an extremely challenging, analytical problem as nearly all are constitutively present at low concentrations that fluctuate according to circadian or alternative periodical, or external stimuli. Thus the mere concentration in a biological sample is only resolutive when this surpasses extreme values. As the vast majority of these molecules are produced by recombinant DNA technology it is believed that the exogenous molecules could bear the signature of the host cell. In particular, these could comprise structural differences originated from co or post-translational differences. In this study we have employed both proteomics and glycomics strategies to compare recombinant and urinary human chorionic gonadotrophin in order to evaluate this hypothesis. As anticipated the recombinant hormone could be shown to contain N-glycolyl neuraminic acid, a sialic acid that cannot be produced by humans. Furthermore, differences were observed in the overall glycosylation, in particular the presence of abundant hybrid-type glycans that were much less pronounced in the recombinant species. These differences were determined to occur predominantly in the alpha-subunit for which antidoping strategies focussed on these elements could be used for both chorionic gonadotrophin and lutrophin as they share the same alpha-subunit.


Subject(s)
Chorionic Gonadotropin/urine , Doping in Sports , Glycoprotein Hormones, alpha Subunit/urine , Polysaccharides/urine , Substance Abuse Detection/methods , Chorionic Gonadotropin/chemistry , Electrophoresis, Polyacrylamide Gel , Glycoprotein Hormones, alpha Subunit/chemistry , Glycosylation , Humans , Neuraminic Acids/chemistry , Neuraminic Acids/urine , Polysaccharides/chemistry , Protein Processing, Post-Translational , Proteomics , Recombinant Proteins/chemistry , Recombinant Proteins/urine
14.
Chembiochem ; 2(12): 884-94, 2001 Dec 03.
Article in English | MEDLINE | ID: mdl-11948877

ABSTRACT

The enzymatic oxidation of uridine 5'-diphospho-alpha-D-galactose (UDP-Gal) and uridine 5'-diphospho-N-acetyl-alpha-D-galactosamine (UDP-GalNAc) with galactose oxidase was combined with a chemical biotinylation step involving biotin-epsilon-amidocaproylhydrazide in a one-pot synthesis. The novel nucleotide sugar derivatives uridine 5'-diphospho-6-biotin-epsilon-amidocaproylhydrazino-alpha-D-galactose (UDP-6-biotinyl-Gal) and uridine 5'-diphospho-6-biotin-epsilon-amidocaproylhydrazino-N-acetyl-alpha-D-galactosamine (UDP-6-biotinyl-GalNAc) were synthesized on a 100-mg scale and characterized by mass spectrometry (fast atom bombardment and matrix-assisted laser desorption/ionization time of flight) and one/two dimensional NMR spectroscopy. It could be demonstrated for the first time, by use of UDP-6-biotinyl-Gal as a donor substrate, that the human recombinant galactosyltransferases beta3Gal-T5, beta4Gal-T1, and beta4Gal-T4 mediate biotinylation of the neoglycoconjugate bovine serum albumin-p-aminophenyl N-acetyl-beta-D-glucosaminide (BSA-(GlcNAc)17) and ovalbumin. The detection of the biotin tag transferred by beta3Gal-T5 onto BSA-(GlcNAc)17 with streptavidin-enzyme conjugates gave detection limits of 150 pmol of tagged GlcNAc in a Western blot analysis and 1 pmol of tagged GlcNAc in a microtiter plate assay. The degree of Gal-biotin tag transfer onto agalactosylated hybrid N-glycans present at the single glycosylation site of ovalbumin was dependent on the Gal-T used (either beta3Gal-T5, beta4Gal-T4, or beta4Gal-T1), which indicates that the acceptor specificity may direct the transfer of the Gal-biotin tag. The potential of this biotinylated UDP-Gal as a novel donor substrate for human galactosyltransferases lies in the targeting of distinct acceptor structures, for example, under-galactosylated glycoconjugates, which are related to diseases, or in the quality control of glycosylation of recombinant and native glycoproteins.


Subject(s)
Biotin/analogs & derivatives , Galactose Oxidase/chemistry , Galactosyltransferases/metabolism , Glycosyltransferases/metabolism , Uridine Diphosphate Galactose/chemistry , Uridine Diphosphate N-Acetylglucosamine/chemistry , Biotin/chemistry , Biotin/metabolism , Biotinylation , Blotting, Western , Gas Chromatography-Mass Spectrometry , Glycosyltransferases/chemistry , Magnetic Resonance Spectroscopy , Ovalbumin/chemistry , Streptavidin/chemistry
15.
Proc Natl Acad Sci U S A ; 96(2): 406-11, 1999 Jan 19.
Article in English | MEDLINE | ID: mdl-9892646

ABSTRACT

Human and mouse cDNAs encoding a new beta-1, 3-N-acetylglucosaminyltransferase (beta3GnT) have been isolated from fetal and newborn brain libraries. The human and mouse cDNAs included ORFs coding for predicted type II transmembrane polypeptides of 329 and 325 aa, respectively. The human and mouse beta3GnT homologues shared 90% similarity. The beta3GnT gene was widely expressed in human and mouse tissues, although differences in the transcript levels were visible, thus indicating possible tissue-specific regulation mechanisms. The beta3GnT enzyme showed a marked preference for Gal(beta1-4)Glc(NAc)-based acceptors, whereas no activity was detected on type 1 Gal(beta1-3)GlcNAc and O-glycan core 1 Gal(beta1-3)GalNAc acceptors. The new beta3GnT enzyme was capable of both initiating and elongating poly-N-acetyllactosamine chains, which demonstrated its identity with the poly-N-acetyllactosamine synthase enzyme (E.C. 2.4.1.149), showed no similarity with the i antigen beta3GnT enzyme described recently, and, strikingly, included several amino acid motifs in its protein that have been recently identified in beta-1,3-galactosyltransferase enzymes. The comparison between the new UDP-GlcNAc:betaGal beta3GnT and the three UDP-Gal:betaGlcNAc beta-1,3-galactosyltransferases-I, -II, and -III reveals glycosyltransferases that share conserved sequence motifs though exhibiting inverted donor and acceptor specificities. This suggests that the conserved amino acid motifs likely represent residues required for the catalysis of the glycosidic (beta1-3) linkage.


Subject(s)
Galactosyltransferases/chemistry , N-Acetylglucosaminyltransferases/chemistry , Polysaccharides/biosynthesis , Amino Acid Sequence , Animals , Base Sequence , Brain/enzymology , Cloning, Molecular , Conserved Sequence/genetics , Humans , Magnetic Resonance Spectroscopy , Mice , Molecular Sequence Data , N-Acetylglucosaminyltransferases/genetics , RNA, Messenger/genetics , Sequence Analysis, DNA , Sequence Homology, Amino Acid , Substrate Specificity
16.
Carbohydr Res ; 288: 203-18, 1996 Jul 19.
Article in English | MEDLINE | ID: mdl-8765732

ABSTRACT

The exopolysaccharide produced by Lactobacillus acidophilus LMG9433 in a semi-defined medium was found to be a charged heteropolymer, with a composition of D-glucose, D-galactose, D-glucuronic acid, and 2-acetamido-2-deoxy-D-glucose in molar ratios of 2:1:1:1. By means of methylation analysis, uronic acid degradation, de-N-acetylation/deamination, partial acid hydrolysis, and 1D/2D NMR studies the polysaccharide was demonstrated to consist of repeating units with the following structure: [Table: see text]


Subject(s)
Lactobacillus acidophilus/chemistry , Polysaccharides, Bacterial/chemistry , Carbohydrate Conformation , Carbohydrate Sequence , Chromatography, High Pressure Liquid , Hydrolysis , Magnetic Resonance Spectroscopy , Methylation , Molecular Sequence Data , Monosaccharides/analysis , Oligosaccharides/analysis , Oligosaccharides/chemistry , Polysaccharides, Bacterial/isolation & purification , Uronic Acids
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