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1.
Eur J Clin Microbiol Infect Dis ; 42(7): 803-818, 2023 Jul.
Article in English | MEDLINE | ID: mdl-37093325

ABSTRACT

A ring trial among five European laboratories was organized to reach consistency in microsatellite (MS) typing of the zoonotic parasite Toxoplasma gondii. Three sample sets were circulated and analyzed by each laboratory following a previously published method that is based on fragment length polymorphism of 15 MS markers. The first sample set compared typing results in general and focused on effects of DNA concentration; the second sample set focused on the polymorphic fingerprinting markers that can differentiate T. gondii strains within the same archetypal lineage; and the third set focused on non-archetypal genotypes. Methodological variations between laboratories, including the software programs used to determine MS fragment length, were collated using a questionnaire. Overall, lineage-level typing results reached a high level of agreement, especially in samples with the highest DNA concentrations. However, laboratory-specific differences were observed for particular markers. Major median differences in fragment length, of up to 6 base pairs, were related to the fluorophore used to label fragment-specific primers. In addition, primer pairs with identical sequences obtained from different suppliers resulted in fragments of differing length. Furthermore, differences in the way the sequencing profiles were assessed and interpreted may have led to deviating results in fragment length determination. Harmonization of MS typing, for example, by using the same fluorophores or by numerical adjustments applied to the fragment-lengths determined, could improve the uniformity of the results across laboratories. This is the first interlaboratory comparison, providing guidelines (added as a supplement) for the optimization of this technique.


Subject(s)
Toxoplasma , Toxoplasmosis, Animal , Humans , Animals , Toxoplasma/genetics , Genetic Variation , Polymorphism, Restriction Fragment Length , DNA, Protozoan/genetics , Microsatellite Repeats , Genotype
2.
J Comp Pathol ; 174: 58-62, 2020 Jan.
Article in English | MEDLINE | ID: mdl-31955804

ABSTRACT

A 1.5-year-old ewe was presented with neurological signs that had been observed from about 2 days prior to death. There had been no clinical response to anti-inflammatory and antibiotic treatment. Histopathological examination of the brain revealed a severe and widespread eosinophilic meningoencephalomyelitis of unknown aetiology. Defining histological features included diffuse angiocentric eosinophilic infiltrates in the neuroparenchyma and meninges, neuronal necrosis, astrocytosis, neuropil vacuolation and occasional glial scars. Differential diagnostics for eosinophilic meningoencephalitis were taken into account and investigated by means of special stains, immunohistochemistry, bacteriology and polymerase chain reaction. No pathological changes or ancillary tests were supportive or revealed a specific aetiology for the condition and therefore it was considered idiopathic. Idiopathic meningoencephalitis is a rare disease, mainly described in man and rarely in dogs, with no apparent aetiological cause or potential breed predisposition. To our knowledge this is the first case of idiopathic eosinophilic meningoencephalitis in a sheep and provides a histopathological guideline for prospective comparative pathology studies.


Subject(s)
Meningoencephalitis/veterinary , Sheep Diseases/pathology , Animals , Brain/pathology , Eosinophilia/pathology , Eosinophilia/veterinary , Female , Meningoencephalitis/pathology , Sheep
3.
Acta Parasitol ; 64(4): 738-744, 2019 Dec.
Article in English | MEDLINE | ID: mdl-31111358

ABSTRACT

PURPOSE: Toxoplasma gondii is a zoonotic parasite capable of infecting a wide range of hosts. Free-range chickens are important sentinels in the epidemiology of this parasite as they feed from the ground and are likely to ingest oocysts shed in the faeces of infected cats. Atypical strains of T. gondii are known to dominate in South America where they are associated with more severe disease in humans, yet relatively little is known about the strains circulating in neighbouring Caribbean islands. METHODS: In this study, hearts and brains were collected from free-range chickens in Antigua and Barbuda (n = 45), Dominica (n = 76) and Trinidad (n = 41), and DNA was extracted for nested ITS1 PCR and PCR-RFLP. Sera were collected and screened for antibodies using the modified agglutination test (MAT). RESULTS: Antibodies to T. gondii were detected in 20.5, 38.2 and 17.1% of chickens in Antigua and Barbuda, Dominica and Trinidad, respectively. Toxoplasma gondii DNA was also detected by PCR in 24.4, 17.1 and 17.1% of chickens, respectively, giving an overall prevalence of 31.1, 42.1, and 29.3% for each of the 3 island nations. Results of PCR-RFLP revealed 2 new atypical genotypes (designated ToxoDB #281 and #282) and one Type III (ToxoDB #2) in chickens from Antigua. Partial genotyping of a further 8 isolates (7 from Antigua and one from Trinidad) revealed different allele-types at five or more markers for 7 of the isolates, suggesting atypical genotypes. CONCLUSIONS: This is the first study to report the prevalence of T. gondii in free-range chickens in Antigua and Barbuda, Dominica and Trinidad and Tobago. It is also the first to report the presence of atypical genotypes in Antigua and Barbuda and Trinidad and Tobago.


Subject(s)
Chickens/parasitology , Genetic Variation , Poultry Diseases/epidemiology , Poultry Diseases/parasitology , Toxoplasma/genetics , Toxoplasmosis, Animal/epidemiology , Animals , Antibodies, Protozoan/blood , Brain/parasitology , DNA, Protozoan/genetics , Genotype , Heart/parasitology , Prevalence , West Indies/epidemiology
4.
Vet Parasitol ; 201(1-2): 31-9, 2014 Mar 17.
Article in English | MEDLINE | ID: mdl-24524895

ABSTRACT

Fasciola hepatica is a common parasite in cattle, and bovine fasciolosis causes significant production losses, as well as being a zoonotic disease of global importance. F. hepatica has been shown to have immunoregulatory effects and the aim of this research was to establish whether F. hepatica infection influences the response to vaccination against respiratory pathogens in calves. A total of 48 calves were randomly and equally allocated to two groups. The experimental group was infected with F. hepatica, while the other group was used as a control. At week 2 and 6 after infection calves from both groups were administered a vaccine containing inactivated PI-3, BRSV and Mannheimia haemolytica, pathogens commonly associated with bovine respiratory disease. Blood samples were taken weekly over 12 weeks to measure specific antibodies against all vaccine antigens and against F. hepatica, as well as IgG1 and IgG2 isotypes for PI-3 and BRSV specific antibodies. Faecal samples were examined for F. hepatica eggs and routine haematology and liver enzyme biochemistry were performed and cytokine production in vitro measured. Liver enzymes (GGT and GLDH) and eosinophils were significantly higher in the experimental group, whereas neutrophil numbers were higher in the control group. There was no significant difference between the groups in terms of vaccine-specific total responses to PI-3, BRSV and M. haemolytica. IgG1 levels were higher in comparison to IgG2 levels in both PI-3 and BRSV specific antibodies. IL-4 levels from stimulated and unstimulated PBMC were significantly higher in the control group. IFN-γ levels were significantly higher in PBMC from the control group when cultured in medium only. No significant differences were noted in the levels of other cytokines measured. In this work, no effect of early F. hepatica infection on the antibody responses to a range of respiratory vaccine antigens in calves was shown. However, differences in cytokine responsiveness of PBMC between control and infected groups were observed, indicating that further work in measuring the effect of F. hepatica infection response to challenge infection following vaccination would be warranted.


Subject(s)
Antibody Formation/immunology , Bacterial Vaccines/immunology , Cattle Diseases/immunology , Fascioliasis/immunology , Vaccination/veterinary , Viral Vaccines/immunology , Animals , Antibodies, Bacterial/blood , Antibodies, Viral/blood , Bovine Respiratory Disease Complex/immunology , Cattle , Cytokines/blood , Cytokines/genetics , Enzyme-Linked Immunosorbent Assay/veterinary , Fasciola hepatica/immunology , Feces/parasitology , Gene Expression Regulation/immunology , Male , Random Allocation
5.
Parasite Immunol ; 30(3): 181-5, 2008 Mar.
Article in English | MEDLINE | ID: mdl-18251973

ABSTRACT

Toxocara canis can infect a number of hosts including mice and humans. In the murine host, larvae exhibit a predilection for the central nervous system, resulting in an increasing number of parasites migrating to the brain as infection progresses. Previous studies have shown that larval burdens vary between individual outbred mice receiving the same inocula, suggesting a role for immunity in the establishment of cerebral infection. Although the systemic immune response to T. canis has been widely reported, there has been no investigation of the cerebral immune response. The aim of the present study was to characterize the cerebral immune response in two inbred strains of T. canis-infected mice (BALB/c and NIH) at several time points post-infection (p.i.). Relative quantification of gene expression in the brains of these mice showed increased expression of IL-5, IL-10, IFN-gamma and inducible nitric oxide synthase (iNOS). This response was detected as early as 3 days p.i., persisting up to 97 days p.i., and was more pronounced in BALB/c-infected mice. These results have implications for the role of these cytokines and iNOS in the cerebral establishment of T. canis, and in the cerebral pathology reported during infection.


Subject(s)
Brain/immunology , Cytokines/biosynthesis , Toxocara canis/immunology , Toxocariasis/immunology , Animals , Cytokines/genetics , Gene Expression Profiling , Male , Mice , Mice, Inbred BALB C , Nitric Oxide Synthase Type II/biosynthesis , Nitric Oxide Synthase Type II/genetics , Reverse Transcriptase Polymerase Chain Reaction , Time Factors
6.
J Comp Pathol ; 135(2-3): 130-141, 2006.
Article in English | MEDLINE | ID: mdl-16997005

ABSTRACT

A serial examination of three groups of cattle infected intravenously (iv) (Group 1, n=8) or subcutaneously (sc) (Group 2, n=8) with live Neospora caninum tachyzoites or with VERO cells (Group 3, n=8) at 70 days' gestation was carried out and the nature of the inflammatory responses in the placenta and the presence of parasite antigen were analysed. Immune cells expressing CD3, CD4, CD8, gamma delta (gammadelta) T-cell receptors (TCR), CD79alpha cytoplasmic (cy) (B cells) and NKp46 [natural killer (NK) cells] antigens were identified immunohistochemically and cells expressing mRNA for interferon-gamma (IFN-gamma) were labelled by in-situ hybridization. Intravenous inoculation caused mortality in all fetuses from 28 days post-inoculation (dpi) onwards. Subcutaneous inoculation caused mortality in 50% of the animals by 28dpi. Pathological changes in the placenta consisted of necrosis of fetal placental villi, necrosis and inflammation in adjacent areas of the maternal septum and inflammation at the base of the maternal caruncle. The inflammatory infiltrate consisted mainly of CD3(+) lymphocytes, dominated by CD4(+) and gammadelta TCR(+) cells, with CD8(+) cells present to a lesser extent. The results from the control group indicated fewer NK cells than those occurring in the placenta of human beings or mice. Infiltration of CD4(+) cells and NKp46(+) cells was observed in the caruncular base and septa 14 days after infection, whereas infiltration of gammadelta TCR(+) cells was observed from 28 dpi onwards. To our knowledge this is the first report on the presence and distribution of NK cells in the bovine placenta. Maternal inflammatory cells expressing mRNA for IFN-gamma were identified in animals inoculated with parasites iv or sc at 14 and 28 dpi, respectively. In the sc-inoculated dams with live fetuses at 28, 42 and 56dpi, there was no evidence of parasite antigen, infiltration of immune cells or production of IFN-gamma, suggesting that the parasite had not reached the placenta. The exact cause of fetal death was not established. Tissue destruction by the parasite may have occurred; in addition, there may have been a T helper 1 (Th-1) immune response to the neospora infection at the materno-fetal interface, resulting in infiltrations of CD4T cells, gammadelta T cells and NK cells and the subsequent production of IFN-gamma. It is possible that a pro-inflammatory Th-1 response early in gestation protects the dam by eliminating the parasite; however, it may lead to destruction of the placental tissues themselves and thus be incompatible with fetal survival.


Subject(s)
Cattle Diseases/parasitology , Coccidiosis/veterinary , Neospora/pathogenicity , Placenta/immunology , Placenta/parasitology , Pregnancy, Animal/immunology , Animals , CD3 Complex/genetics , CD3 Complex/metabolism , CD4-Positive T-Lymphocytes/metabolism , CD4-Positive T-Lymphocytes/pathology , CD8-Positive T-Lymphocytes/metabolism , CD8-Positive T-Lymphocytes/pathology , Cattle , Cattle Diseases/immunology , Cattle Diseases/metabolism , Cattle Diseases/pathology , Coccidiosis/immunology , Coccidiosis/pathology , Female , Fetal Death , Interferon-gamma/genetics , Interferon-gamma/metabolism , Neospora/immunology , Placenta/metabolism , Placenta/pathology , Pregnancy , RNA, Messenger/genetics , RNA, Messenger/metabolism , Receptors, Antigen, T-Cell, gamma-delta/genetics , Receptors, Antigen, T-Cell, gamma-delta/metabolism , Receptors, Immunologic/genetics , Receptors, Immunologic/metabolism , T-Lymphocytes/immunology , T-Lymphocytes/metabolism , T-Lymphocytes/pathology , Th1 Cells/immunology , Th1 Cells/metabolism , Th1 Cells/pathology
7.
Parasitology ; 132(Pt 6): 791-801, 2006 Jun.
Article in English | MEDLINE | ID: mdl-16476184

ABSTRACT

Toxocara canis, the parasitic roundworm of dogs, can infect a number of paratenic hosts, such as mice and humans, due to the widespread dissemination of its ova in the environment. In these paratenic hosts, larvae have been shown to exhibit a predilection for the central nervous system, resulting in an increasing number of parasites migrating to the brain as infection progresses. In an initial experiment, we investigated the differential brain involvement of T. canis in 7 strains of inbred mice, and chose 2 strains, susceptible (BALB/c) and resistant (NIH) to cerebral infection. In a second experiment, both strains were investigated in terms of course of migration, larval accumulation, and behavioural response to T. canis infection. Results revealed that infected BALB/c mice took significantly longer to drink from a water source (following a period of deprivation), compared with control mice, indicating some degree of memory impairment. Cerebral larval recoveries from both strains of mice demonstrated variation between the two experiments, suggesting that larval burdens may not be a reliable indicator of susceptibility or resistance to T. canis infection. The percentage of total recovered larvae in each organ may be a better representation of larval distribution. Our model system may provide insights into the impact of chronic geohelminth infection on cognitive development.


Subject(s)
Brain Diseases/parasitology , Disease Models, Animal , Toxocara canis/pathogenicity , Toxocariasis/parasitology , Analysis of Variance , Animals , Behavior, Animal/physiology , Brain/parasitology , Brain Diseases/immunology , Brain Diseases/physiopathology , Disease Susceptibility/parasitology , Larva/physiology , Liver/parasitology , Lung/parasitology , Male , Mice , Mice, Inbred BALB C , Motor Activity/physiology , Muscles/parasitology , Time Factors , Toxocariasis/immunology , Toxocariasis/physiopathology
8.
J Comp Pathol ; 129(2-3): 186-95, 2003.
Article in English | MEDLINE | ID: mdl-12921725

ABSTRACT

To investigate the pathogenesis of bovine neosporosis, 14 pregnant cattle were each inoculated subcutaneously with either 10(7) or 5 x 10(8) Neospora caninum (strain NC1) tachyzoites at 140 days' gestation. Serial necropsies were then carried out over an 8-week period. In the placenta, Neospora DNA and histopathological changes were observed in samples taken 14 days post-inoculation (dpi), with focal necrosis of maternal caruncular septa and fetal placental villi, serum leakage, and a maternal and fetal inflammatory response. At subsequent samplings, pathological changes in the placenta showed signs of resolution. No parasitaemia was detected in the dams in the two weeks following inoculation. In the fetus, Neospora DNA was detected at 14 dpi, and histopathological changes in the fetal central nervous system at 28 and 42 dpi consisted of small foci of necrosis and inflammation. Resolution of placental lesions during the experiment indicated that the disease was being controlled, and fetal infection, although established, did not appear to be progressing to a fatal outcome. The two doses of tachyzoites produced similar results, but the higher dose elicited earlier and more extensive lesions in the placenta and fetus. Control animals remained negative for all parameters recorded. It is concluded that in bovine neosporosis the placenta plays a central role in the pathogenesis and epidemiology of the infection, and that while primary tissue destruction by the parasite may endanger the fetus, the maternal and fetal inflammatory responses may also be damaging.


Subject(s)
Cattle Diseases/pathology , Coccidiosis/pathology , Neospora/pathogenicity , Pregnancy Complications, Infectious/pathology , Protozoan Infections, Animal , Animals , Body Temperature , Cattle , Cattle Diseases/parasitology , Coccidiosis/genetics , Coccidiosis/parasitology , DNA, Protozoan/analysis , Female , Gestational Age , Neospora/genetics , Placenta/parasitology , Placenta/pathology , Pregnancy , Pregnancy Complications, Infectious/parasitology
9.
Biotechniques ; 33(2): 420-3, 2002 Aug.
Article in English | MEDLINE | ID: mdl-12188195

ABSTRACT

High-throughput genomic approaches to gene function or target identification have led to the development and implementation of the 96-well format for many standard molecular biology manipulations. The apparatus described here, a Multichannel Plating Unit, is designed to plate out individual cultures efficientlyfrom standard 96-well culture blocks. Following transformation, aliquots of culture are loaded onto sterile beads that are rolled along individual channels of agar media. After the beads traverse the channel, they drop into the exit alley for disposal via an exit pore. The apparatus presented has 12 individual lanes, and the spacing is compatible with a standard 12-channel pipettor Thus, the unit allows for the rapid plating of 12 individual cultures at a time. For one 96-well block of transformants, this method reduces the labeling and plating effort from 96 culture dishes that are spread individually to eight multichannel plates. The savings in time, materials, and storage space is significant


Subject(s)
Bacteria/genetics , Bacteriological Techniques/instrumentation , Bacteriological Techniques/methods , Bacteria/classification , Escherichia coli , Quality Control , Sequence Analysis, DNA/instrumentation , Transformation, Bacterial
10.
Transgenic Res ; 10(2): 121-32, 2001 Apr.
Article in English | MEDLINE | ID: mdl-11305359

ABSTRACT

The efficiency of the binary bacterial artificial chromosome (BIBAC) vector for Agrobacterium-mediated stable transfer of high molecular weight DNA into plants was tested in tomato. Several variables affecting transformation efficiency were examined including insert size, Agrobacterium genetic background, and the presence of additional copies of the virG, virE1 and virE2 genes. It was found that a helper plasmid containing extra copies of virG was an absolute requirement for obtaining tomato transformants with the BIBAC. MOG101 with the virG helper plasmid was found to be the most efficient strain for transfer of high molecular weight DNA (150 kb). Selected high molecular weight DNA transformants were advanced several generations (up to the R4) to assess T-DNA stability. This analysis showed that the T-DNA was stably maintained and inherited through several meioses regardless of whether it was in the hemizygous or homozygous state. Expression of a selectable marker gene within the T-DNA was also examined through several generations and no gene silencing was observed. Thus, the BIBAC is a useful system for transfer of large DNA fragments into the plant genome.


Subject(s)
DNA, Plant/genetics , Solanum lycopersicum/genetics , Base Sequence , Blotting, Southern , Chromosomes, Artificial, Bacterial , DNA Primers , DNA, Plant/chemistry , Molecular Weight , Plasmids , Rhizobium/genetics
11.
J Bacteriol ; 182(6): 1541-8, 2000 Mar.
Article in English | MEDLINE | ID: mdl-10692358

ABSTRACT

Plasmid conjugation systems are composed of two components, the DNA transfer and replication system, or Dtr, and the mating pair formation system, or Mpf. During conjugal transfer an essential factor, called the coupling protein, is thought to interface the Dtr, in the form of the relaxosome, with the Mpf, in the form of the mating bridge. These proteins, such as TraG from the IncP1 plasmid RP4 (TraG(RP4)) and TraG and VirD4 from the conjugal transfer and T-DNA transfer systems of Ti plasmids, are believed to dictate specificity of the interactions that can occur between different Dtr and Mpf components. The Ti plasmids of Agrobacterium tumefaciens do not mobilize vectors containing the oriT of RP4, but these IncP1 plasmid derivatives lack the trans-acting Dtr functions and TraG(RP4). A. tumefaciens donors transferred a chimeric plasmid that contains the oriT and Dtr genes of RP4 and the Mpf genes of pTiC58, indicating that the Ti plasmid mating bridge can interact with the RP4 relaxosome. However, the Ti plasmid did not mobilize transfer from an IncQ relaxosome. The Ti plasmid did mobilize such plasmids if TraG(RP4) was expressed in the donors. Mutations in traG(RP4) with defined effects on the RP4 transfer system exhibited similar phenotypes for Ti plasmid-mediated mobilization of the IncQ vector. When provided with VirD4, the tra system of pTiC58 mobilized plasmids from the IncQ relaxosome. However, neither TraG(RP4) nor VirD4 restored transfer to a traG mutant of the Ti plasmid. VirD4 also failed to complement a traG(RP4) mutant for transfer from the RP4 relaxosome or for RP4-mediated mobilization from the IncQ relaxosome. TraG(RP4)-mediated mobilization of the IncQ plasmid by pTiC58 did not inhibit Ti plasmid transfer, suggesting that the relaxosomes of the two plasmids do not compete for the same mating bridge. We conclude that TraG(RP4) and VirD4 couples the IncQ but not the Ti plasmid relaxosome to the Ti plasmid mating bridge. However, VirD4 cannot couple the IncP1 or the IncQ relaxosome to the RP4 mating bridge. These results support a model in which the coupling proteins specify the interactions between Dtr and Mpf components of mating systems.


Subject(s)
Bacterial Proteins/genetics , Conjugation, Genetic , Escherichia coli Proteins , Membrane Proteins , Plasmids/genetics , Virulence Factors , Agrobacterium tumefaciens/genetics , Bacterial Proteins/metabolism , Escherichia coli/genetics , Replication Origin
12.
J Appl Toxicol ; 20(5): 389-93, 2000.
Article in English | MEDLINE | ID: mdl-11139169

ABSTRACT

Pyridine was evaluated in an in vivo/in vitro mouse DNA repair assay. Unscheduled DNA synthesis (UDS) was used as an indicator of DNA damage to hepatocytes from male B6C3F1 mice. Test animals were exposed by oral gavage to pyridine or to the vehicle or positive control articles, and hepatocytes were collected and labeled by incubation in media supplemented with [3H]thymidine. Following labeling, the cultures were processed for autoradiographic analysis. Doses were selected based on a pilot study in which 0, 250, 500, 750, 1000 or 2000 mg kg(-1) pyridine in water was administered by gavage. Mice in the 1000 and 2000 mg kg(-1) dose groups were comatose following dosing and died within 24 h of dose administration. Pyridine dose levels for the UDS determination were set at 175, 350 and 700 mg kg(-1). Pyridine solutions in water were administered to mice 2 or 16 h prior to the scheduled sacrifice. The vehicle control group received water 16 h before sacrifice and the positive control group received 10 mg kg(-1) dimethylnitrosamine (DMN) 2 h before sacrifice. Pyridine did not significantly increase the UDS response in hepatocytes isolated from the treated animals, as measured by the incorporation of [3H]thymidine, using standard criteria for a negative response: less than zero mean net grains in repair (NG) and <20% of cells in repair (% IR; cells in repair have at least 5 NG). The vehicle control group and the low, mid- and high pyridine dose groups yielded less than -8.3 NG and < or =1% IR. The positive control group yielded a positive UDS response, with 10.8 NG and 62% IR. These results indicate that pyridine is non-genotoxic in B6C3F1 mouse liver using the UDS endpoint.


Subject(s)
DNA Repair/drug effects , Hepatocytes/drug effects , Pyridines/pharmacology , Animals , Body Weight/drug effects , Carcinogens/toxicity , Cell Nucleus/drug effects , Cell Nucleus/ultrastructure , Cytoplasm/drug effects , Cytoplasm/ultrastructure , Dimethylnitrosamine/toxicity , Male , Mice , Mice, Inbred Strains
13.
J Bacteriol ; 179(23): 7544-50, 1997 Dec.
Article in English | MEDLINE | ID: mdl-9393722

ABSTRACT

There are seven conserved motifs (IA, IB, and II to VI) in DNA helicase II of Escherichia coli that have high homology among a large family of proteins involved in DNA metabolism. To address the functional importance of motifs II to VI, we employed site-directed mutagenesis to replace the charged amino acid residues in each motif with alanines. Cells carrying these mutant alleles exhibited higher UV and methyl methanesulfonate sensitivity, increased rates of spontaneous mutagenesis, and elevated levels of homologous recombination, indicating defects in both the excision repair and mismatch repair pathways. In addition, we also changed the highly conserved tyrosine(600) in motif VI to phenylalanine (uvrD309, Y600F). This mutant displayed a moderate increase in UV sensitivity but a decrease in spontaneous mutation rate, suggesting that DNA helicase II may have different functions in the two DNA repair pathways. Furthermore, a mutation in domain IV (uvrD307, R284A) significantly reduced the viability of some E. coli K-12 strains at 30 degrees C but not at 37 degrees C. The implications of these observations are discussed.


Subject(s)
Adenosine Triphosphatases/metabolism , Conserved Sequence , DNA Helicases , Escherichia coli/enzymology , Adenosine Triphosphatases/drug effects , Adenosine Triphosphatases/genetics , Adenosine Triphosphatases/radiation effects , Amino Acid Sequence , Conjugation, Genetic , DNA Mutational Analysis , DNA Repair/genetics , Dose-Response Relationship, Drug , Dose-Response Relationship, Radiation , Methyl Methanesulfonate/pharmacology , Molecular Sequence Data , Mutagenesis, Site-Directed , Recombination, Genetic/genetics , Ultraviolet Rays/adverse effects
14.
Gene ; 200(1-2): 107-16, 1997 Oct 24.
Article in English | MEDLINE | ID: mdl-9373144

ABSTRACT

A binary-BAC (BIBAC) vector suitable for Agrobacterium-mediated plant transformation with high-molecular-weight DNA was constructed. A BIBAC vector is based on the bacterial artificial chromosome (BAC) library vector and is also a binary vector for Agrobacterium-mediated plant transformation. The BIBAC vector has the minimal origin region of the Escherichia coli F plasmid and the minimal origin of replication of the Agrobacterium rhizogenes Ri plasmid, and thus replicates as a single-copy plasmid in both E. coli and in A. tumefaciens. The T-DNA of the BIBAC vector can be transferred into the plant nuclear genome. As examples, a 30-kb yeast genomic DNA fragment and a 150-kb human genomic DNA fragment were inserted into the BIBAC vector; these constructs were maintained in both E. coli and A. tumefaciens. In order to increase the efficiency of transfer of unusually large BIBAC T-DNAs, helper plasmids that carry additional copies of A. tumefaciens virulence genes virG and virE were constructed. These helper plasmids are compatible with, and can be present in addition to, the BIBAC vector in the A. tumefaciens host. This report details the components of the BIBAC system, providing information essential to the general understanding and the application of this new technology.


Subject(s)
DNA, Bacterial/genetics , Gene Transfer Techniques , Genes, Bacterial , Genetic Vectors , Plants, Genetically Modified , Plants/genetics , Rhizobium/genetics , Virulence Factors , Bacterial Proteins/biosynthesis , Bacterial Proteins/genetics , Chromosomes, Bacterial , DNA Replication , DNA-Binding Proteins/biosynthesis , DNA-Binding Proteins/genetics , Escherichia coli/genetics , Gene Library , Genome, Human , Humans , Molecular Weight , Plasmids , Transcription Factors/biosynthesis , Transcription Factors/genetics , Virulence/genetics
15.
Environ Mol Mutagen ; 30(3): 354-8, 1997.
Article in English | MEDLINE | ID: mdl-9366915

ABSTRACT

We have evaluated the use of four different positive control compounds for assessing UDS in monkey hepatocytes and have found three of these, methylmethanesulfonate, benzo[a]pyrene, and dimethylbenz[a]anthracene, to produce strong positive responses in vitro. Dimethylnitrosamine induced only weak responses. We also report that the strength of the response induced by procarcinogens was not enhanced in hepatocytes taken from Aroclor 1254-pretreated monkeys, even though substantial induction of cytochrome P450 enzymes was demonstrated in these cells. These studies raise the question of the utility of employing an in vivo induction system to enhance the monkey UDS assay.


Subject(s)
Aroclors/pharmacology , DNA Repair , Mutagenicity Tests/methods , 9,10-Dimethyl-1,2-benzanthracene/toxicity , Animals , Benzo(a)pyrene/toxicity , Biotransformation , Dimethylnitrosamine/toxicity , Enzyme Induction , Liver , Macaca fascicularis , Male , Methyl Methanesulfonate/toxicity
16.
Proc Natl Acad Sci U S A ; 93(18): 9975-9, 1996 Sep 03.
Article in English | MEDLINE | ID: mdl-8790442

ABSTRACT

In conjunction with an enhanced system for Agrobacterium-mediated plant transformation, a new binary bacterial artificial chromosome (BIBAC) vector has been developed that is capable of transferring at least 150 kb of foreign DNA into a plant nuclear genome. The transferred DNA appears to be intact in the majority of transformed tobacco plants analyzed and is faithfully inherited in the progeny. The ability to introduce high molecular weight DNA into plant chromosomes should accelerate gene identification and genetic engineering of plants and may lead to new approaches in studies of genome organization.


Subject(s)
DNA, Bacterial/genetics , DNA, Plant/metabolism , Gene Transfer Techniques , Base Sequence , DNA, Plant/chemistry , Molecular Sequence Data , Restriction Mapping , Rhizobium
18.
Food Chem Toxicol ; 31(5): 343-50, 1993 May.
Article in English | MEDLINE | ID: mdl-8505019

ABSTRACT

Both soya bean flakes (SBF) and liquorice root extract (LRE) have previously been reported to have anticarcinogenic properties, which have been thought to be related to an increased activity of specific enzymes responsible for the detoxification of chemical carcinogens. 30- and 90-day studies were conducted in male B6C3F1 mice to determine which, if any, of several detoxification enzymes are induced by SBF or LRE. Mice fed 8 and 25% LRE showed a variety of adverse clinical signs, poor weight gain and 30% mortality. Significant increases in liver:body weight ratios were observed in both the SBF and LRE groups. No significant treatment-related gross autopsy findings were observed in any of the SBF groups. A number of abnormalities were observed in the LRE groups, including lesions of the kidney, liver, spleen and thymus. Liver samples from the 90-day study were analysed for 7-ethoxycoumarin O-deethylase (7-ECOD), benzo[a]pyrene hydroxylase (BPH), superoxide dismutase (SOD), glutathione S-transferase (GST) and UDP-glucuronyl transferase (UDPGT) at 90 days, and at an interim 30-day autopsy. No treatment-related increases were observed for BPH or SOD. Both SBF and LRE induced modest increases in UDPGT activity. SBF induced modest increases in GST activity, but LRE decreased this activity. 7-ECOD activity was significantly increased by LRE and decreased by SBF. Samples from a 30-day study in which both LRE and SBF were administered at various dose levels were examined for UDPGT activity; all dose groups showed decreases in UDPGT activity relative to controls. The results suggest that both SBF and LRE may alter the activities of specific enzymes involved in the detoxification of chemical carcinogens; however, the combination of these two foodstuffs may not produce an additive effect in B6C3F1 mice.


Subject(s)
Glucuronosyltransferase/biosynthesis , Glutathione Transferase/biosynthesis , Glycine max/toxicity , Glycyrrhiza , Liver/drug effects , Plants, Medicinal , Administration, Oral , Animals , Body Weight/drug effects , Drug Synergism , Enzyme Induction/drug effects , Liver/enzymology , Male , Mice , Organ Size/drug effects , Plant Extracts/toxicity
19.
J Bacteriol ; 175(5): 1375-83, 1993 Mar.
Article in English | MEDLINE | ID: mdl-8444800

ABSTRACT

The Escherichia coli F plasmid gene required for amino-terminal acetylation of F-pilin subunits was identified. Using Western blots (immunoblots), we assayed the reaction of monoclonal antibodies with F-pilin polypeptides in inner membrane preparations from various F mutant strains. It was known that JEL92 recognizes an internal pilin epitope and JEL93 recognizes the acetylated amino-terminal sequence (L.S. Frost, J.S. Lee, D.G. Scraba, and W. Paranchych, J. Bacteriol. 168:192-198, 1986). As expected, neither antibody reacted with inner membranes from F- cells or Flac derivatives that do not synthesize pilin. Mutations that affected the individual activities of F tra genes traA, -B, -C, -D, -E, -F, -G, -H, -I, -J, -K, -L, -M, -N, -P, -R, -U, -V and -W or trb genes trbA, -B, -C, -D, -E, -G, -H, and -I did not prevent JEL92 or JEL93 recognition of membrane pilin. However, Hfr deletion mutants that lacked the most-distal transfer region genes did not express pilin that reacted with JEL93. Nevertheless, all strains that retained traA and traQ did express JEL92-reactive pilin polypeptides. Analysis of strains expressing cloned tra segments showed that traA and traQ suffice for synthesis of JEL92-reactive pilin, but synthesis of JEL93-reactive pilin is additionally dependent on traX. We concluded that the traX product is required for acetylation of F pilin. Interestingly, our data also showed that TraA+ TraQ+ cells synthesize two forms of pilin which migrate at approximately 7 and 8 kDa. In TraX+ cells, both become acetylated and react with JEL93. Preparations of wild-type F-pilus filaments contain both types of subunits.


Subject(s)
Bacterial Outer Membrane Proteins/metabolism , Escherichia coli Proteins , Escherichia coli/genetics , F Factor , Acetylation , Antibodies, Monoclonal , Bacterial Outer Membrane Proteins/genetics , Blotting, Western , Fimbriae Proteins , Genes, Bacterial , Mutation
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