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1.
Mol Ecol ; 31(2): 571-587, 2022 01.
Article in English | MEDLINE | ID: mdl-34716959

ABSTRACT

Ocean deoxygenation events are intensifying worldwide and can rapidly drive adult corals into a state of metabolic crisis and bleaching-induced mortality, but whether coral larvae are subject to similar stress remains untested. We experimentally exposed apo-symbiotic coral larvae of Acropora selago to deoxygenation stress with subsequent reoxygenation aligned to their night-day light cycle, and followed their gene expression using RNA-Seq. After 12 h of deoxygenation stress (~2 mg O2 /L), coral planulae demonstrated a low expression of HIF-targeted hypoxia response genes concomitant with a significantly high expression of PHD2 (a promoter of HIFα proteasomal degradation), similar to corresponding adult corals. Despite exhibiting a consistent swimming phenotype compared to control samples, the differential gene expression observed in planulae exposed to deoxygenation-reoxygenation suggests a disruption of pathways involved in developmental regulation, mitochondrial activity, lipid metabolism, and O2 -sensitive epigenetic regulators. Importantly, we found that treated larvae exhibited a disruption in the expression of conserved HIF-targeted developmental regulators, for example, Homeobox (HOX) genes, corroborating how changes in external oxygen levels can affect animal development. We discuss how the observed deoxygenation responses may be indicative of a possible acclimation response or alternatively may imply negative latent impacts for coral larval fitness.


Subject(s)
Anthozoa , Animals , Anthozoa/genetics , Coral Reefs , Cues , Hypoxia/genetics , Larva/genetics , Stress, Physiological/genetics
2.
Sci Data ; 8(1): 35, 2021 01 29.
Article in English | MEDLINE | ID: mdl-33514754

ABSTRACT

The discovery of multi-species synchronous spawning of scleractinian corals on the Great Barrier Reef in the 1980s stimulated an extraordinary effort to document spawning times in other parts of the globe. Unfortunately, most of these data remain unpublished which limits our understanding of regional and global reproductive patterns. The Coral Spawning Database (CSD) collates much of these disparate data into a single place. The CSD includes 6178 observations (3085 of which were unpublished) of the time or day of spawning for over 300 scleractinian species in 61 genera from 101 sites in the Indo-Pacific. The goal of the CSD is to provide open access to coral spawning data to accelerate our understanding of coral reproductive biology and to provide a baseline against which to evaluate any future changes in reproductive phenology.


Subject(s)
Anthozoa/physiology , Animals , Indian Ocean , Pacific Ocean , Reproduction
3.
PLoS One ; 15(11): e0242847, 2020.
Article in English | MEDLINE | ID: mdl-33232367

ABSTRACT

The escalating rate at which coral communities are declining globally requires urgent intervention and new approaches to reef management to reduce and halt further coral loss. For reef systems with limited natural larval supply, the introduction of large numbers of competent coral larvae directly to natural reef substrata provides a potentially useful approach to replenish adult coral populations. While few experiments have tested this approach, only one experiment has demonstrated its long-term success to date. Given the differences in life-history traits among corals, and different sensitivities of larvae to abiotic and biotic factors, coupled with the dynamic nature of post-settlement survivorship and recruitment processes, trials of the larval enhancement technique with larvae of different coral species are needed to test the broader applicability and viability of this approach. Accordingly, in this paper we examine the applicability of the larval enhancement technique to restore a population of Acropora loripes in the Bolinao-Anda Reef Complex, Pangasinan, northwestern Philippines. Larvae were cultured ex situ following spawning of collected A. loripes colonies in June 2014. Competent larvae were transported to degraded reef areas and approximately 300,000 larvae were introduced in each of three 6 × 4 m plots directly on the reef. Fine mesh enclosures retained the larvae inside each treatment plot for five days. Three adjacent 6 × 4 m plots that served as controls were also covered with mesh enclosures, but no larvae were introduced. Each plot contained ten 10 × 10 cm conditioned settlement tiles cut from dead tabulate Acropora that were used to quantify initial larval settlement. After allowing larval settlement for five days, mean settlement on tiles from the larval enhancement plots that were monitored under stereomicroscopes was significantly higher (27.8 ± 6.7 spat per tile) than in control plots, in which not a single recruit was recorded. Post-settlement survivorship and growth of spat and coral recruits on tiles and reef substrata inside the experimental plots were monitored periodically for 35 months. After 35 months, the mean size of each of the remaining 47 A. loripes coral colonies surviving on the reef substrata was 438.1 ± 5.4 cm3, with a mean diameter of 7.9 ± 0.6 cm. The average production cost for each of the surviving A. loripes colonies at 35 months was USD 35.20. These colonies are expected to spawn and contribute to the natural larval pool when they become reproductively mature, thereby enhancing natural coral recovery in the area. This study demonstrates that mass coral larval enhancement can be successfully used for restoring populations of coral species with different life-history traits, and the techniques can rapidly increase larval recruitment rates on degraded reef areas, hence catalysing the regeneration of declining coral populations.


Subject(s)
Anthozoa/physiology , Conservation of Natural Resources , Coral Reefs , Larva/physiology , Animals , Behavior, Animal/physiology , Philippines
4.
Environ Toxicol Chem ; 39(12): 2527-2539, 2020 12.
Article in English | MEDLINE | ID: mdl-32946126

ABSTRACT

Antarctic marine environments are at risk from petroleum fuel spills as shipping activities in the Southern Ocean increase. Knowledge of the sensitivity of Antarctic species to fuels under environmentally realistic exposure conditions is lacking. We determined the toxicity of 3 fuels, Special Antarctic Blend diesel (SAB), marine gas oil (MGO), and intermediate fuel oil (IFO 180) to a common Antarctic sea urchin, Sterechinus neumayeri. Sensitivity was estimated for early developmental stages from fertilization to the early 4-arm pluteus in toxicity tests of up to 24 d duration. The effects of the water accommodated fractions (WAFs) of fuels were investigated under different exposure scenarios to determine the relative sensitivity of stages and of different exposure regimes. Sensitivity to fuel WAFs increased through development. Both MGO and IFO 180 were more toxic than SAB, with median effect concentration values for the most sensitive pluteus stage of 3.5, 6.5, and 252 µg/L total hydrocarbon content, respectively. Exposure to a single pulse during fertilization and early embryonic development showed toxicity patterns similar to those observed from continuous exposure. The results show that exposure to fuel WAFs during critical early life stages affects the subsequent viability of larvae, with consequent implications for reproductive success. The sensitivity estimates for S. neumayeri that we generated can be utilized in risk assessments for the management of Antarctic marine ecosystems. Environ Toxicol Chem 2020;39:2527-2539. © 2020 SETAC.


Subject(s)
Fertilization/drug effects , Fuel Oils/toxicity , Petroleum/toxicity , Sea Urchins/embryology , Sea Urchins/physiology , Animals , Antarctic Regions , Embryonic Development/drug effects , Hydrocarbons/toxicity , Larva/drug effects , Petroleum Pollution , Sea Urchins/drug effects , Toxicity Tests , Water , Water Pollutants, Chemical/toxicity
5.
J Clin Periodontol ; 47(8): 933-940, 2020 08.
Article in English | MEDLINE | ID: mdl-32418217

ABSTRACT

AIMS: This study evaluated pain associated with electronic probing comparing two commercially available probe tip designs using standardized force. MATERIAL AND METHODS: Twenty adult patients with slight-moderate chronic periodontitis received periodontal probing using controlled-force electronic probe at 2 visits. In visit 1, a random arch was probed with either a ball-end (0.6 mm diameter, 408 kPa; Test) or straight (0.45 mm diameter, 726 kPa; Control) probe tip. The opposing arch was then probed using the other probe tip. Discomfort associated with each probing episode was recorded using visual analogue scale (VAS). 7 days later, tip assignments were alternated from visit 1 and VAS re-scored. VAS scores were compared by probe tip, arches and visits. RESULTS: Both tips provided similar VAS scores (median 13.5 for ball-end and 14 for straight, p = .3713). However, the straight tip was associated with decreased VAS scores in the maxilla (p = .01). Overall, VAS values did not differ by arch or study visit. Individual VAS scores showed high levels of correlation between study visits and between tips used (R2  = .86 and 0.64, respectively, p < .0001). CONCLUSIONS: Both probing approaches were associated with low levels of pain on probing. The straight tip may be perceived as more comfortable in the maxilla.


Subject(s)
Electronics , Periodontics , Adult , Humans , Pain Measurement , Perception , Periodontal Pocket
6.
Sci Rep ; 10(1): 5488, 2020 03 26.
Article in English | MEDLINE | ID: mdl-32218470

ABSTRACT

Successful recruitment of new individuals is essential for recovery of degraded coral reefs. Enhancing supply of coral larvae increases initial settlement, however post-settlement survival can be influenced by density-dependent processes. We investigated the influence of larval density on settlement, colony abundance and growth to 24 months for Acropora tenuis in the north-western Philippines, to determine whether larval supply can be optimised to maximise successful recruitment. Thirty different densities of coral larvae were enclosed for five days around settlement tiles and highest total settlement occurred on tiles with highest larval densities. After 12 months, however, colony abundance and coral cover was lower on high density tiles (supplied with ~2,500-5,000 larvae) than tiles supplied with ~1,000-2,000 larvae. Coral cover at 24 months remained highest on tiles supplied with ~1,000-2,500 larvae. Larval density influenced larval substratum selection, with proportionally fewer larvae settling in typically preferred locations as density increased. We conclude that larval density can influence post-settlement colony abundance and coral cover to 12 months, with coral cover trends persisting to 24 months. We show that optimising larval densities can maximise coral recruitment and growth, however oversupply of larvae at very high densities can have negative outcomes for larval restoration.


Subject(s)
Anthozoa/growth & development , Coral Reefs , Environmental Restoration and Remediation/methods , Animals , Environmental Restoration and Remediation/instrumentation , Larva/growth & development , Philippines , Population Density , Time Factors
7.
Sci Total Environ ; 715: 136951, 2020 May 01.
Article in English | MEDLINE | ID: mdl-32014776

ABSTRACT

The frequency and intensity of marine heatwaves that result in coral bleaching events have increased over recent decades and led to catastrophic losses of reef-building corals in many regions. The high-latitude coral assemblages at Lord Howe Island, which is a UNESCO listed site is the world southernmost coral community, were exposed to successive thermal anomalies following a fast phase-transition of the record-breaking 2009 to 2010 warm pool El Niño in the Central Pacific to a strong La Niña event in late 2010. The coral community experienced severe and unprecedented consecutive bleaching in both 2010 and 2011. Coral health surveys completed between March 2010 and September 2012 quantified the response and recovery of approximately 43,700 coral colonies to these successive marine heatwaves. In March 2010, coral bleaching ranged from severe, with 99% of colonies bleached at some shallow lagoon sites, to mild at deeper reef slope sites, with only 17% of individuals affected. Significant immediate mortality from thermal stress was evident during the peak of the bleaching event. Overall, species in the genera Pocillopora, Stylophora, Seriatopora and Porites were the most affected, while minimal bleaching and mortality was recorded among members of other coral families (e.g. Acroporidae, Dendrophyllidae & Merulinidae). Surviving corals underwent a subsequent, but much less intense, thermal anomaly in 2011 that led to a disproportionate bleaching response among susceptible taxa. While this observation indicates that the capacity of thermally susceptible high-latitude corals to acclimatize to future ocean warming may be limited, particularly if bleaching events occur annually, our long-term survey data shows that coral cover at most sites recovered to pre-bleaching levels within three years in the absence of further thermal anomalies.


Subject(s)
Anthozoa , Animals , Coral Reefs , El Nino-Southern Oscillation , Islands
8.
Sci Rep ; 7(1): 13985, 2017 10 25.
Article in English | MEDLINE | ID: mdl-29070842

ABSTRACT

Reef-building corals have essential roles in reef ecosystems but are highly susceptible to disturbances. Increasing anthropogenic disturbances are eroding coral community resilience, leading to declining reef ecosystem function and status globally. Successful reproduction and recruitment are essential for restoring coral populations but recruitment-limitation can constrain recovery. We supplied ~400,000 Acropora tenuis larvae in fine-mesh enclosures on each of four larval-enhancement plots, comprising natural reef substrata and ten settlement tiles, on degraded reef areas in the northwestern Philippines. Initial mean total settlement on tiles in larval-enhancement plots was high (255.3 ± 68.6), whereas no larvae settled in natural control plots. Recruit survivorship began stabilising after five months, with juveniles becoming visible by eye at nine months. After three years a mean of 2.3 m-2 colonies survived within each larval-enhancement plot. Most colonies grew rapidly (16.1 ± 0.7 cm mean diameter) and spawned successfully at three years, thereby quickly re-establishing a breeding population. In contrast, natural recruitment failed to produce any new visible A. tenuis colonies. These results demonstrate that mass larval settlement can rapidly enhance recruitment and coral recovery on degraded reef areas, and provides an important option for active reef restoration where larval supply and recruitment success are limiting.


Subject(s)
Anthozoa/physiology , Coral Reefs , Larva/physiology , Reproduction , Animals , Behavior, Animal
9.
Proc Biol Sci ; 284(1861)2017 Aug 30.
Article in English | MEDLINE | ID: mdl-28835555

ABSTRACT

Understanding how range-edge populations will respond to climate change is an urgent research priority. Here, we used a phylogenetic community ecology approach to examine how ecological and evolutionary processes shape biodiversity patterns of scleractinian corals at their high-latitude range limits in eastern Australia. We estimated phylogenetic signal in seven ecologically important functional traits and conducted tests of phylogenetic structure at local and regional scales using the net relatedness (NRI) and nearest taxon indices (NTI) for the presence/absence and abundance data. Regional tests showed light phylogenetic clustering, indicating that coral species found in this subtropical-to-temperate transition zone are more closely related to each other than are species on the nearby, more northerly Great Barrier Reef. Local tests revealed variable patterns of phylogenetic clustering and overdispersion and higher than expected phylogenetic turnover among sites. In combination, these results are broadly consistent with the hierarchical filtering model, whereby species pass through a regional climatic filter based on their tolerances for marginal conditions and subsequently segregate into local assemblages according to the relative strength of habitat filtering and species interactions. Conservatism of tested traits suggests that corals will likely track their niches with climate change. Nevertheless, high turnover of lineages among sites indicates that range shifts will probably vary among species and highlights the vulnerability and conservation significance of high-latitude reefs.


Subject(s)
Anthozoa/classification , Biodiversity , Biological Evolution , Phylogeny , Animals , Australia , Climate Change , Coral Reefs , Ecosystem
10.
Ecotoxicol Environ Saf ; 145: 32-41, 2017 Nov.
Article in English | MEDLINE | ID: mdl-28704691

ABSTRACT

The mining and production of nickel in tropical regions have the potential to impact on ecologically valuable tropical marine ecosystems. Currently, few data exist to assess the risks of nickel exposure to tropical ecosystems and to derive ecologically relevant water quality guidelines. In particular, data are lacking for keystone species such as scleractinian corals, which create the complex structural reef habitats that support many other marine species. As part of a larger study developing risk assessment tools for nickel in the tropical Asia-Pacific region, we investigated the toxicity of nickel on fertilisation success in three species of scleractinian corals: Acropora aspera, Acropora digitifera and Platygyra daedalea. In the literature, more data are available on the effects of copper on coral fertilisation, so to allow for comparisons with past studies, the toxicity of copper to A. aspera and P. daedalea was also determined. Overall, copper was more toxic than nickel to the fertilisation success of the species tested. Acropora aspera was the most sensitive species to nickel (NOEC < 280µg Ni/L), followed by A. digitifera with an EC10 of 2000µg Ni/L and P. daedalea (EC10 > 4610µg Ni/L). Acropora aspera was also the more sensitive species to copper with an EC10 of 5.8µg Cu/L. The EC10 for P. daedalea was 16µg Cu/L, similar to previous studies. This is the first time that the toxicity of nickel on fertilisation success in Acropora species has been reported, and thus provides valuable data that can contribute to the development of reliable water quality guidelines for nickel in tropical marine waters.


Subject(s)
Anthozoa/drug effects , Copper/toxicity , Fertilization/drug effects , Germ Cells/drug effects , Nickel/toxicity , Water Pollutants, Chemical/toxicity , Animals , Anthozoa/growth & development , Australia , Ecosystem , Mining , Species Specificity , Tropical Climate , Water Quality
11.
Environ Toxicol Chem ; 36(9): 2444-2455, 2017 09.
Article in English | MEDLINE | ID: mdl-28256740

ABSTRACT

Toxicity testing with Antarctic species is required for risk assessment of fuel spills in Antarctic coastal waters. The lethal and sublethal (movement behavior) sensitivities of adults and juveniles of the Antarctic amphipod Paramoera walkeri to the water accommodated fractions (WAFs) of 3 fuels were estimated in extended-duration tests at -1 °C to 21 d. Response of P. walkeri for lethal hydrocarbon concentrations was slow, with 50% lethal concentrations (LC50s) first able to be estimated at 7 d for adults exposed to Special Antarctic Blend diesel (SAB), which had the highest hydrocarbon concentrations of the 3 fuel WAFs. Juveniles showed greater response to marine gas oil (MGO) and intermediate residual fuel oil (IFO 180) at longer exposure durations and were most sensitive at 21 d to IFO 180 (LC50 = 12 µg/L). Adults were initially more sensitive than juveniles; at 21 d, however, juveniles were more than twice as sensitive as adults to SAB (LC50 = 153 µg/L and 377 µg/L, respectively). Significant effects on movement behavior were evident at earlier time points and lower concentrations than was mortality in all 3 fuel WAFs, and juveniles were highly sensitive to sublethal effects of MGO. These first estimates of Antarctic amphipod sensitivity to diesel and fuel oils in seawater contribute to the development of ecologically relevant risk assessments for management of hydrocarbon contamination in the region. Environ Toxicol Chem 2017;36:2444-2455. © 2017 SETAC.


Subject(s)
Amphipoda/drug effects , Fuel Oils/toxicity , Water Pollutants, Chemical/toxicity , Amphipoda/physiology , Animals , Antarctic Regions , Lethal Dose 50 , Seawater , Toxicity Tests
12.
Glob Chang Biol ; 23(9): 3437-3448, 2017 09.
Article in English | MEDLINE | ID: mdl-28247459

ABSTRACT

Many ecosystems around the world are rapidly deteriorating due to both local and global pressures, and perhaps none so precipitously as coral reefs. Management of coral reefs through maintenance (e.g., marine-protected areas, catchment management to improve water quality), restoration, as well as global and national governmental agreements to reduce greenhouse gas emissions (e.g., the 2015 Paris Agreement) is critical for the persistence of coral reefs. Despite these initiatives, the health and abundance of corals reefs are rapidly declining and other solutions will soon be required. We have recently discussed options for using assisted evolution (i.e., selective breeding, assisted gene flow, conditioning or epigenetic programming, and the manipulation of the coral microbiome) as a means to enhance environmental stress tolerance of corals and the success of coral reef restoration efforts. The 2014-2016 global coral bleaching event has sharpened the focus on such interventionist approaches. We highlight the necessity for consideration of alternative (e.g., hybrid) ecosystem states, discuss traits of resilient corals and coral reef ecosystems, and propose a decision tree for incorporating assisted evolution into restoration initiatives to enhance climate resilience of coral reefs.


Subject(s)
Climate Change , Coral Reefs , Ecosystem , Animals , Anthozoa , Climate
13.
Aquat Toxicol ; 184: 1-13, 2017 Mar.
Article in English | MEDLINE | ID: mdl-28063936

ABSTRACT

Significant amounts of trace metals have been released into both nearshore and deep sea environments in recent years, resulting in increased concentrations that can be toxic to marine organisms. Trace metals can negatively affect external fertilization processes in marine broadcast spawners and may cause a reduction in fertilization success at elevated concentrations. Due to its sensitivity and ecological importance, fertilization success has been widely used as a toxicity endpoint in ecotoxicological testing, which is an important method of evaluating the toxicity of contaminants for management planning. Ecotoxicological data regarding fertilization success are available across the major marine phyla, but there remain uncertainties that impair our ability to confidently interpret and analyse these data. At present, the cellular and biochemical events underlying trace metal toxicity in external fertilization are not known. Metal behavior and speciation play an important role in bioavailability and toxicity but are often overlooked, and disparities in experimental designs between studies limit the degree to which results can be synthesised and compared to those of other relevant species. We reviewed all available literature covering cellular toxicity mechanisms, metal toxicities and speciation, and differences in methodologies between studies. We conclude that the concept of metal toxicity should be approached in a more holistic manner that involves elucidating toxicity mechanisms, improving the understanding of metal behavior and speciation on bioavailability and toxicity, and standardizing the fertilization assay methods among different groups of organisms. We identify opportunities to improve the fertilization assay that will allow robust critical and comparative analysis between species and their sensitivities to trace metals during external fertilization, and enable data to be more readily extrapolated to field conditions.


Subject(s)
Aquatic Organisms/drug effects , Invertebrates/drug effects , Metals/toxicity , Animals , Biological Assay , Fertilization/drug effects , Trace Elements/toxicity , Water Pollutants, Chemical/toxicity
14.
Environ Toxicol Chem ; 36(6): 1563-1571, 2017 06.
Article in English | MEDLINE | ID: mdl-27813135

ABSTRACT

The risk of a major marine fuel spill in Antarctic waters is increasing, yet there are currently no standard or suitable response methods under extreme Antarctic conditions. Fuel dispersants may present a possible solution; however, little data exist on the toxicity of dispersants or fuels to Antarctic species, thereby preventing informed management decisions. Larval development toxicity tests using 3 life history stages of the Antarctic sea urchin (Sterechinus neumayeri) were completed to assess the toxicity of physically dispersed, chemically dispersed, and dispersant-only water-accommodated fractions (WAFs) of an intermediate fuel oil (IFO 180, BP) and the chemical dispersant Slickgone NS (Dasic International). Despite much lower total petroleum hydrocarbon concentrations, physically dispersed fuels contained higher proportions of low-to-intermediate weight carbon compounds and were generally at least an order of magnitude more toxic than chemically dispersed fuels. Based on concentrations that caused 50% abnormality (EC50) values, the embryonic unhatched blastula life stage was the least affected by fuels and dispersants, whereas the larval 4-armed pluteus stage was the most sensitive. The present study is the first to investigate the possible implications of the use of fuel dispersants for fuel spill response in Antarctica. The results indicate that the use of a fuel dispersant did not increase the hydrocarbon toxicity of IFO 180 to the early life stages of Antarctic sea urchins, relative to physical dispersal. Environ Toxicol Chem 2017;36:1563-1571. © 2016 SETAC.


Subject(s)
Fuel Oils/toxicity , Sea Urchins/drug effects , Water Pollutants, Chemical/toxicity , Animals , Antarctic Regions , Hydrocarbons/chemistry , Petroleum Pollution , Sea Urchins/growth & development , Water Pollutants, Chemical/analysis
15.
J Dent Educ ; 80(9): 1119-25, 2016 Sep.
Article in English | MEDLINE | ID: mdl-27587579

ABSTRACT

The high prevalence of distress among health professionals during their education has fostered increased interest in the study of student well-being. The aim of this study was to assess the self-perceived wellness of dental students and determine the relationship between factors affecting wellness and demographic variables. An online questionnaire was distributed to 334 first-through fourth-year dental students at one U.S. dental school. The questionnaire consisted of modified versions of the Perceived Wellness Survey, Medical Outcomes Study Social Support Survey, and Mental Health Inventory and also collected demographic information. The response rate was 78% (N=261). More than 80% of the respondents reported that they were happy all, most, or a good bit of the time. These students exhibited a strong sense of self-worth, were positive about their friendships, and perceived they had good social support. Less than 20% of respondents did not view their physical health as excellent and identified a lack of self-perceived wellness. First-year and single students reported statistically less social support. Students who were parents perceived their wellness less favorably. Hispanic and Asian students were less happy regarding their mental health than white and African American students. These findings suggest that students, especially Hispanic and Asian students, may benefit from programs that promote student well-being. Academic programs that encourage students to work together and promote peer-to-peer involvement may be beneficial, especially for first-year and single students.


Subject(s)
Health Status , Mental Health , Students, Dental/statistics & numerical data , Adult , Female , Humans , Male , Mental Health/statistics & numerical data , Schools, Dental/statistics & numerical data , Students, Dental/psychology , Surveys and Questionnaires , United States , Young Adult
16.
Sci Rep ; 6: 33638, 2016 09 19.
Article in English | MEDLINE | ID: mdl-27642101

ABSTRACT

Porphyromonas gingivalis and Filifactor alocis are fastidious anaerobic bacteria strongly associated with chronic forms of periodontitis. Our understanding of the growth activities of these microorganisms in situ is very limited. Previous studies have shown that copy numbers of ribosomal-RNA precursor (pre-rRNA) of specific pathogen species relative to genomic-DNA (gDNA) of the same species (P:G ratios) are greater in actively growing bacterial cells than in resting cells. The method, so-called steady-state pre-rRNA-analysis, represents a novel culture-independent approach to study bacteria. This study employed this technique to examine the in situ growth activities of oral bacteria in periodontitis before and after non-surgical periodontal therapy. Sub-gingival paper-point samples were taken at initial and re-evaluation appointments. Pre-rRNA and gDNA levels of P. gingivalis and F. alocis were quantified and compared using reverse-transcriptase qPCR. The results indicate significantly reduced growth activity of P. gingivalis, but not F. alocis, after therapy. The P:G ratios of P. gingivalis and F. alocis were compared and a low-strength, but statistically significant inter-species correlation was detected. Our study demonstrates that steady-state pre-rRNA-analysis can be a valuable culture-independent approach to studying opportunistic bacteria in periodontitis.


Subject(s)
Bacteria, Anaerobic/metabolism , Chronic Periodontitis/microbiology , Clostridiales/metabolism , Porphyromonas gingivalis/metabolism , Adult , Bacteria, Anaerobic/genetics , Bacteria, Anaerobic/growth & development , Bacterial Load , Chronic Periodontitis/therapy , Clostridiales/genetics , Clostridiales/growth & development , Female , Genome, Bacterial , Humans , Male , Middle Aged , Porphyromonas gingivalis/genetics , Porphyromonas gingivalis/growth & development , Real-Time Polymerase Chain Reaction , Young Adult
17.
Mar Pollut Bull ; 110(1): 343-353, 2016 Sep 15.
Article in English | MEDLINE | ID: mdl-27389459

ABSTRACT

As part of risk assessment of fuel oil spills in Antarctic and subantarctic waters, this study describes partitioning of hydrocarbons from three fuels (Special Antarctic Blend diesel, SAB; marine gas oil, MGO; and intermediate grade fuel oil, IFO 180) into seawater at 0 and 5°C and subsequent depletion over 7days. Initial total hydrocarbon content (THC) of water accommodated fraction (WAF) in seawater was highest for SAB. Rates of THC loss and proportions in equivalent carbon number fractions differed between fuels and over time. THC was most persistent in IFO 180 WAFs and most rapidly depleted in MGO WAF, with depletion for SAB WAF strongly affected by temperature. Concentration and composition remained proportionate in dilution series over time. This study significantly enhances our understanding of fuel behaviour in Antarctic and subantarctic waters, enabling improved predictions for estimates of sensitivities of marine organisms to toxic contaminants from fuels in the region.


Subject(s)
Fuel Oils , Hydrocarbons/chemistry , Petroleum Pollution , Seawater/chemistry , Animals , Antarctic Regions , Cold Temperature , Ecotoxicology/methods , Fuel Oils/analysis , Fuel Oils/toxicity , Hydrocarbons/toxicity , Petroleum Pollution/analysis , Risk Assessment/methods , Water Pollutants, Chemical/chemistry , Water Pollutants, Chemical/toxicity
18.
ISME J ; 10(11): 2693-2701, 2016 11.
Article in English | MEDLINE | ID: mdl-27093048

ABSTRACT

Reef-building corals possess a range of acclimatisation and adaptation mechanisms to respond to seawater temperature increases. In some corals, thermal tolerance increases through community composition changes of their dinoflagellate endosymbionts (Symbiodinium spp.), but this mechanism is believed to be limited to the Symbiodinium types already present in the coral tissue acquired during early life stages. Compelling evidence for symbiont switching, that is, the acquisition of novel Symbiodinium types from the environment, by adult coral colonies, is currently lacking. Using deep sequencing analysis of Symbiodinium rDNA internal transcribed spacer 2 (ITS2) PCR amplicons from two pocilloporid coral species, we show evidence consistent with de novo acquisition of Symbiodinium types from the environment by adult corals following two consecutive bleaching events. Most of these newly detected symbionts remained in the rare biosphere (background types occurring below 1% relative abundance), but one novel type reached a relative abundance of ~33%. Two de novo acquired Symbiodinium types belong to the thermally resistant clade D, suggesting that this switching may have been driven by consecutive thermal bleaching events. Our results are particularly important given the maternal mode of Symbiodinium transmission in the study species, which generally results in high symbiont specificity. These findings will cause a paradigm shift in our understanding of coral-Symbiodinium symbiosis flexibility and mechanisms of environmental acclimatisation in corals.


Subject(s)
Anthozoa/parasitology , Dinoflagellida/isolation & purification , Seawater/parasitology , Acclimatization , Adaptation, Physiological , Animals , Anthozoa/genetics , Anthozoa/physiology , Coral Reefs , Dinoflagellida/classification , Dinoflagellida/genetics , Dinoflagellida/physiology , Polymerase Chain Reaction , Symbiosis
19.
Proc Natl Acad Sci U S A ; 112(15): 4531-40, 2015 Apr 14.
Article in English | MEDLINE | ID: mdl-25675493

ABSTRACT

The highly distinctive and mostly endemic Australian land mammal fauna has suffered an extraordinary rate of extinction (>10% of the 273 endemic terrestrial species) over the last ∼200 y: in comparison, only one native land mammal from continental North America became extinct since European settlement. A further 21% of Australian endemic land mammal species are now assessed to be threatened, indicating that the rate of loss (of one to two extinctions per decade) is likely to continue. Australia's marine mammals have fared better overall, but status assessment for them is seriously impeded by lack of information. Much of the loss of Australian land mammal fauna (particularly in the vast deserts and tropical savannas) has been in areas that are remote from human population centers and recognized as relatively unmodified at global scale. In contrast to general patterns of extinction on other continents where the main cause is habitat loss, hunting, and impacts of human development, particularly in areas of high and increasing human population pressures, the loss of Australian land mammals is most likely due primarily to predation by introduced species, particularly the feral cat, Felis catus, and European red fox, Vulpes vulpes, and changed fire regimes.


Subject(s)
Conservation of Natural Resources/methods , Ecosystem , Extinction, Biological , Mammals/physiology , Animals , Australia , Conservation of Natural Resources/statistics & numerical data , Conservation of Natural Resources/trends , Felis/physiology , Foxes/physiology , Humans , Mammals/classification , North America , Population Dynamics , Species Specificity
20.
Ecology ; 95(4): 1000-9, 2014 Apr.
Article in English | MEDLINE | ID: mdl-24933818

ABSTRACT

Abiotic filtering is a major driver of gradients in the structure and functioning of ecosystems from the tropics to the poles. It is thus likely that environmental filtering is an important assembly process at the transition of biogeographical zones where many species occur at their range limits. Shifts in species abundances and association patterns along environmental gradients can be indicative of environmental filtering, which is predicted to be stronger in areas of high abiotic stress and to promote increased similarity of ecological characteristics among co-occurring species. Here we test these hypotheses for scleractinian corals along a broad latitudinal gradient in high-latitude eastern Australia, where corals occur at the margins of their ranges and environmental tolerances. We quantify variation in taxonomic, zoogeographic, and functional patterns combined with null model approaches and demonstrate systematic spatial variation in community structure and significant covariance of species abundance distributions and functional characteristics along the latitudinal gradient. We describe a strong biogeographic transition zone, consistent with patterns expected under abiotic filtering, whereby species are sorted along the latitudinal gradient according to their tolerances for marginal reef conditions. High-latitude coastal reefs are typified by widely distributed, generalist, stress-tolerant coral species with massive and horizontally spreading morphologies and by diminishing influence of tropical taxa at higher latitudes and closer to the mainland. Higher degree of ecological similarity among co-occurring species than expected by chance supports the environmental filtering hypothesis. Among individual traits, the structural traits corallite size and colony morphology were filtered most strongly, suggesting that characteristics linked to energy acquisition and physical stability may be particularly important for coral survival in high-latitude environments. These findings highlight interspecific differences and species interactions with the environment as key drivers of community organization in biogeographic transition zones and support the hypothesis that environmental filters play a stronger role than biotic interactions in structuring ecological communities in areas of high abiotic stress.


Subject(s)
Adaptation, Physiological , Anthozoa/physiology , Ecosystem , Animals , Australia , Pacific Ocean , Species Specificity
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