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1.
RSC Adv ; 13(43): 29862-29865, 2023 Oct 11.
Article in English | MEDLINE | ID: mdl-37842681

ABSTRACT

We explored the toxicity and mutagenicity of a wide range of xenobiotic nucleoside triphosphates to an Escherichia coli strain equipped with a nucleoside triphosphate transporter. This bacterial test provides a tool to evaluate and guide the synthesis of nucleotides for applications such as the propagation of non-natural genetic information or the selection of potential drugs.

2.
ACS Synth Biol ; 7(6): 1565-1572, 2018 06 15.
Article in English | MEDLINE | ID: mdl-29746092

ABSTRACT

We report the design and elaboration of a selection protocol for importing a canonical substrate of DNA polymerase, thymidine triphosphate (dTTP) in Escherichia coli. Bacterial strains whose growth depend on dTTP uptake, through the action of an algal plastid transporter expressed from a synthetic gene inserted in the chromosome, were constructed and shown to withstand the simultaneous loss of thymidylate synthase and thymidine kinase. Such thyA tdk dual deletant strains provide an experimental model of tight nutritional containment for preventing dissemination of microbial GMOs. Our strains transported the four canonical dNTPs, in the following order of preference: dCTP > dATP ≥ dGTP > dTTP. Prolonged cultivation under limitation of exogenous dTTP led to the enhancement of dNTP transport by adaptive evolution. We investigated the uptake of dCTP analogues with altered sugar or nucleobase moieties, which were found to cause a loss of cell viability and an increase of mutant frequency, respectively. E. coli strains equipped with nucleoside triphosphate transporters should be instrumental for evolving organisms whose DNA genome is morphed chemically by fully substituting its canonical nucleotide components.


Subject(s)
Directed Molecular Evolution/methods , Escherichia coli/genetics , Escherichia coli/metabolism , Thymine Nucleotides/metabolism , Bacterial Outer Membrane Proteins/genetics , Decitabine/chemistry , Decitabine/metabolism , Deoxycytosine Nucleotides/genetics , Deoxycytosine Nucleotides/metabolism , Deoxyguanine Nucleotides/genetics , Deoxyguanine Nucleotides/metabolism , Deoxyribonucleotides/chemistry , Deoxyribonucleotides/metabolism , Escherichia coli/growth & development , Escherichia coli Proteins/genetics , Microalgae/genetics , Microorganisms, Genetically-Modified , Mutation Rate , Peptide Hydrolases/genetics , Thymidine Kinase/genetics , Thymidylate Synthase/genetics , Thymine Nucleotides/genetics
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