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Structure ; 29(7): 731-742.e6, 2021 07 01.
Article in English | MEDLINE | ID: mdl-33740396

ABSTRACT

Branched Lipid II, required for the formation of indirectly crosslinked peptidoglycan, is generated by MurM, a protein essential for high-level penicillin resistance in the human pathogen Streptococcus pneumoniae. We have solved the X-ray crystal structure of Staphylococcus aureus FemX, an isofunctional homolog, and have used this as a template to generate a MurM homology model. Using this model, we perform molecular docking and molecular dynamics to examine the interaction of MurM with the phospholipid bilayer and the membrane-embedded Lipid II substrate. Our model suggests that MurM is associated with the major membrane phospholipid cardiolipin, and experimental evidence confirms that the activity of MurM is enhanced by this phospholipid and inhibited by its direct precursor phosphatidylglycerol. The spatial association of pneumococcal membrane phospholipids and their impact on MurM activity may therefore be critical to the final architecture of peptidoglycan and the expression of clinically relevant penicillin resistance in this pathogen.


Subject(s)
Bacterial Proteins/chemistry , Bacterial Proteins/metabolism , Cardiolipins/metabolism , Penicillin Resistance , Peptide Synthases/chemistry , Peptide Synthases/metabolism , Streptococcus pneumoniae/growth & development , Binding Sites , Cell Membrane/metabolism , Crystallography, X-Ray , Models, Molecular , Molecular Docking Simulation , Molecular Dynamics Simulation , Phosphatidylglycerols/metabolism , Protein Conformation , Sequence Homology, Amino Acid , Streptococcus pneumoniae/drug effects , Streptococcus pneumoniae/metabolism , Uridine Diphosphate N-Acetylmuramic Acid/analogs & derivatives , Uridine Diphosphate N-Acetylmuramic Acid/metabolism
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