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1.
Front Plant Sci ; 14: 1113274, 2023.
Article in English | MEDLINE | ID: mdl-37324661

ABSTRACT

Taxa are traditionally identified using morphological proxies for groups of evolutionarily isolated populations. These proxies are common characters deemed by taxonomists as significant. However, there is no general rule on which character or sets of characters are appropriate to circumscribe taxa, leading to discussions and uncertainty. Birch species are notoriously hard to identify due to strong morphological variability and factors such as hybridization and the existence of several ploidy levels. Here, we present evidence for an evolutionarily isolated line of birches from China that are not distinguishable by traditionally assumed taxon recognition proxies, such as fruit or leaf characters. We have discovered that some wild material in China and some cultivated in the Royal Botanic Gardens Edinburgh, formerly recognized as Betula luminifera, differ from other individuals by having a peeling bark and a lack of cambial fragrance. We use restriction site-associated DNA sequencing and flow cytometry to study the evolutionary status of the unidentified Betula samples to assess the extent of hybridization between the unidentified Betula samples and typical B. luminifera in natural populations. Molecular analyses show the unidentified Betula samples as a distinct lineage and reveal very little genetic admixture between the unidentified samples and B. luminifera. This may also be facilitated by the finding that B. luminifera is tetraploid, while the unidentified samples turned out to be diploid. We therefore conclude that the samples represent a yet unrecognized species, which is here described as Betula mcallisteri.

2.
Ecol Evol ; 11(23): 17485-17495, 2021 Dec.
Article in English | MEDLINE | ID: mdl-34938523

ABSTRACT

In the species-rich genus Impatiens, few natural hybrids are known, even though closely related species often occur sympatrically. In this study, we aim to bridge the gap between micro- and macro-evolution to disentangle pre- and postzygotic mechanisms that may prevent hybridization in the Impatiens purpureoviolacea complex from Central Africa. We analyzed habitat types, species distribution, pollination syndromes, pollinator dependency, genome sizes, and chromosome numbers of seven out of the ten species of the complex as well as of one natural hybrid and reconstructed the ancestral chromosome numbers of the complex. Several species of the complex occur in sympatry or geographically very close to each other. All of them are characterized by pre- and/or postzygotic mechanisms potentially preventing hybridization. We found four independent polyploidization events within the complex. The only known natural hybrid always appears as single individual and is self-fertile. But the plants resulting from self-pollinated seeds often die shortly after first flowering. These results indicate that the investigated mechanisms in combination may effectively but not absolutely prevent hybridization in Impatiens and probably occur in other genera with sympatric species as well.

3.
Thomson, Scott A; Pyle, Richard L; Ahyong, Shane T; Alonso-Zarazaga, Miguel; Ammirati, Joe; Araya, Juan Francisco; Ascher, John S; Audisio, Tracy Lynn; Azevedo-Santos, Valter M; Bailly, Nicolas; Baker, William J; Balke, Michael; Barclay, Maxwell V. L; Barrett, Russell L; Benine, Ricardo C; Bickerstaff, James R. M; Bouchard, Patrice; Bour, Roger; Bourgoin, Thierry; Boyko, Christopher B; Breure, Abraham S. H; Brothers, Denis J; Byng, James W; Campbell, David; Ceriaco, Luis M. P; Cernak, Istvan; Cerretti, Pierfilippo; Chang, Chih-Han; Cho, Soowon; Copus, Joshua M; Costello, Mark J; Cseh, Andras; Csuzdi, Csaba; Culham, Alastair; D'Elia, Guillermo; d'Acoz, Cedric d'Udekem; Daneliya, Mikhail E; Dekker, Rene; Dickinson, Edward C; Dickinson, Timothy A; van Dijk, Peter Paul; Dijkstra, Klaas-Douwe B; Dima, Balint; Dmitriev, Dmitry A; Duistermaat, Leni; Dumbacher, John P; Eiserhardt, Wolf L; Ekrem, Torbjorn; Evenhuis, Neal L; Faille, Arnaud; Fernandez-Trianam, Jose L; Fiesler, Emile; Fishbein, Mark; Fordham, Barry G; Freitas, Andre V. L; Friol, Natalia R; Fritz, Uwe; Froslev, Tobias; Funk, Vicki A; Gaimari, Stephen D; Garbino, Guilherme S. T; Garraffoni, Andre R. S; Geml, Jozsef; Gill, Anthony C; Gray, Alan; Grazziotin, Felipe Gobbi; Greenslade, Penelope; Gutierrez, Eliecer E; Harvey, Mark S; Hazevoet, Cornelis J; He, Kai; He, Xiaolan; Helfer, Stephan; Helgen, Kristofer M; van Heteren, Anneke H; Garcia, Francisco Hita; Holstein, Norbert; Horvath, Margit K; Hovenkamp, Peter H; Hwang, Wei Song; Hyvonen, Jaakko; Islam, Melissa B; Iverson, John B; Ivie, Michael A; Jaafar, Zeehan; Jackson, Morgan D; Jayat, J. Pablo; Johnson, Norman F; Kaiser, Hinrich; Klitgard, Bente B; Knapp, Daniel G; Kojima, Jun-ichi; Koljalg, Urmas; Kontschan, Jeno; Krell, Frank-Thorsten; Krisai-Greilhuberm, Irmgard; Kullander, Sven; Latelle, Leonardo; Lattke, John E; Lencioni, Valeria; Lewis, Gwilym P; Lhano, Marcos G; Lujan, Nathan K; Luksenburg, Jolanda A; Mariaux, Jean; Marinho-Filho, Jader; Marshall, Christopher J; Mate, Jason F; McDonough, Molly M; Michel, Ellinor; Miranda, Vitor F. O; Mitroiulm, Mircea-Dan; Molinari, Jesus; Monks, Scott; Moore, Abigail J; Moratelli, Ricardo; Muranyi, David; Nakano, Takafumi; Nikolaeva, Svetlana; Noyes, John; Ohl, Michael; Oleas, Nora H; Orrell, Thomas; Pall-Gergele, Barna; Pape, Thomas; Papp, Viktor; Parenti, Lynne R; Patterson, David; Pavlinov, Igor Ya; Pine, Ronald H; Poczai, Peter; Prado, Jefferson; Prathapan, Divakaran; Rabeler, Richard K; Randall, John E; Rheindt, Frank E; Rhodin, Anders G. J; Rodriguez, Sara M; Rogers, D. Christopher; Roque, Fabio de O; Rowe, Kevin C; Ruedas, Luis A; Salazar-Bravo, Jorge; Salvador, Rodrigo B; Sangster, George; Sarmiento, Carlos E; Schigel, Dmitry S; Schmidt, Stefan; Schueler, Frederick W; Segers, Hendrik; Snow, Neil; Souza-Dias, Pedro G. B; Stals, Riaan; Stenroos, Soili; Stone, R. Douglas; Sturm, Charles F; Stys, Pavel; Teta, Pablo; Thomas, Daniel C; Timm, Robert M; Tindall, Brian J; Todd, Jonathan A; Triebel, Dagmar; Valdecasas, Antonio G; Vizzini, Alfredo; Vorontsova, Maria S; de Vos, Jurriaan M; Wagner, Philipp; Watling, Les; Weakley, Alan; Welter-Schultes, Francisco; Whitmore, Daniel; Wilding, Nicholas; Will, Kipling; Williams, Jason; Wilson, Karen; Winston, Judith E; Wuster, Wolfgang; Yanega, Douglas; Yeates, David K; Zaher, Hussam; Zhang, Guanyang; Zhang, Zhi-Qiang; Zhou, Hong-Zhang.
PLoS. Biol. ; 16(3): e2005075, 2018.
Article in English | Sec. Est. Saúde SP, SESSP-IBPROD, Sec. Est. Saúde SP | ID: but-ib15045
4.
Nature ; 548(7666): 158, 2017 08 09.
Article in English | MEDLINE | ID: mdl-28796215

Subject(s)
Phylogeny
5.
PhytoKeys ; (54): 1-166, 2015.
Article in English | MEDLINE | ID: mdl-26312043

ABSTRACT

This monograph deals with all 95 names described in the Cucurbitaceae genus Coccinia and recognizes 25 species. Taxonomic novelties are Cocciniaadoensisvar.aurantiaca (C.Jeffrey) Holstein, stat. nov., Cocciniasessilifoliavar.variifolia (A.Meeuse) Holstein, stat. nov., and Cocciniaadoensisvar.jeffreyana Holstein, var. nov. For the 25 species 3157 collections were examined, of which 2024 were georeferenced to produce distribution maps. All species are distributed in sub-Saharan Africa with one species, Cocciniagrandis, extending from Senegal in West Africa east to Indonesia and being naturalized on Pacific Islands, in Australia, the Caribbean, and South America. Coccinia species are dioecious creepers or climbers with simple or bifid tendrils that occupy a range of habitats from arid scrubland, woodlands to lowland rainforest and mist forest. The corolla of Coccinia species is sympetalous, usually pale yellow to orange, and 1 to 4.5 cm long. Pollination is by bees foraging for pollen or nectar. After pollination, the developing ovary often exhibits longitudinal mottling, which usually disappears during maturation. All species produce berries with a pericarp in reddish colors (orange-red through to scarlet red), hence the generic name. The globose to cylindrical fruits contain numerous grayish-beige flat to lenticular seeds. Chromosome numbers are 2n = 20, 24, and 22 + XX/XY. Many Coccinia species are used for food, either as roasted tubers, greens as spinach, or the fruits as vegetables. Medicinal value is established in Cocciniagrandis, of which leaves and sap are used against diabetes.

6.
BMC Evol Biol ; 11: 28, 2011 Jan 26.
Article in English | MEDLINE | ID: mdl-21269492

ABSTRACT

BACKGROUND: Conservatism in climatic tolerance may limit geographic range expansion and should enhance the effects of habitat fragmentation on population subdivision. Here we study the effects of historical climate change, and the associated habitat fragmentation, on diversification in the mostly sub-Saharan cucurbit genus Coccinia, which has 27 species in a broad range of biota from semi-arid habitats to mist forests. Species limits were inferred from morphology, and nuclear and plastid DNA sequence data, using multiple individuals for the widespread species. Climatic tolerances were assessed from the occurrences of 1189 geo-referenced collections and WorldClim variables. RESULTS: Nuclear and plastid gene trees included 35 or 65 accessions, representing up to 25 species. The data revealed four species groups, one in southern Africa, one in Central and West African rain forest, one widespread but absent from Central and West African rain forest, and one that occurs from East Africa to southern Africa. A few individuals are differently placed in the plastid and nuclear (LFY) trees or contain two ITS sequence types, indicating hybridization. A molecular clock suggests that the diversification of Coccinia began about 6.9 Ma ago, with most of the extant species diversity dating to the Pliocene. Ancestral biome reconstruction reveals six switches between semi-arid habitats, woodland, and forest, and members of several species pairs differ significantly in their tolerance of different precipitation regimes. CONCLUSIONS: The most surprising findings of this study are the frequent biome shifts (in a relatively small clade) over just 6 - 7 million years and the limited diversification during and since the Pleistocene. Pleistocene climate oscillations may have been too rapid or too shallow for full reproductive barriers to develop among fragmented populations of Coccinia, which would explain the apparently still ongoing hybridization between certain species. Steeper ecological gradients in East Africa and South Africa appear to have resulted in more advanced allopatric speciation there.


Subject(s)
Cucurbitaceae/classification , Cucurbitaceae/genetics , Evolution, Molecular , Phylogeny , Africa South of the Sahara , Ecosystem , Molecular Sequence Data , Plant Proteins/genetics
7.
PhytoKeys ; (7): 27-36, 2011.
Article in English | MEDLINE | ID: mdl-22287923

ABSTRACT

Nuclear and plastid sequences from two individuals of a suspected new species of Coccinia from West Africa were added to an available molecular phylogeny for the remaining 27 species of the genus. Phylogenetic analyses of these data indicate the new species' monophyletic status and closest relatives. Based on four fertile collections, we here describe and illustrate Coccinia intermedia Holstein. We also provide a key to the Coccinia species of West Africa and map their distributions.

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