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1.
Biomed Environ Sci ; 35(5): 393-401, 2022 May 20.
Article in English | MEDLINE | ID: mdl-35676810

ABSTRACT

Objective: The pandemic of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has been engendering enormous hazards to the world. We obtained the complete genome sequences of SARS-CoV-2 from imported cases admitted to the Guangzhou Eighth People's Hospital, which was appointed by the Guangdong provincial government to treat coronavirus disease 2019 (COVID-19). The SARS-CoV-2 diversity was analyzed, and the mutation characteristics, time, and regional trend of variant emergence were evaluated. Methods: In total, 177 throat swab samples were obtained from COVID-19 patients (from October 2020 to May 2021). High-throughput sequencing technology was used to detect the viral sequences of patients infected with SARS-CoV-2. Phylogenetic and molecular evolutionary analyses were used to evaluate the mutation characteristics and the time and regional trends of variants. Results: We observed that the imported cases mainly occurred after January 2021, peaking in May 2021, with the highest proportion observed from cases originating from the United States. The main lineages were found in Europe, Africa, and North America, and B.1.1.7 and B.1.351 were the two major sublineages. Sublineage B.1.618 was the Asian lineage (Indian) found in this study, and B.1.1.228 was not included in the lineage list of the Pangolin web. A reasonably high homology was observed among all samples. The total frequency of mutations showed that the open reading frame 1a (ORF1a) protein had the highest mutation density at the nucleotide level, and the D614G mutation in the spike protein was the commonest at the amino acid level. Most importantly, we identified some amino acid mutations in positions S, ORF7b, and ORF9b, and they have neither been reported on the Global Initiative of Sharing All Influenza Data nor published in PubMed among all missense mutations. Conclusion: These results suggested the diversity of lineages and sublineages and the high homology at the amino acid level among imported cases infected with SARS-CoV-2 in Guangdong Province, China.


Subject(s)
COVID-19 , SARS-CoV-2 , Amino Acids , COVID-19/epidemiology , Genomics , Humans , Mutation , Phylogeny , SARS-CoV-2/genetics
2.
Biomed Environ Sci ; 34(12): 976-983, 2021 Dec 20.
Article in English | MEDLINE | ID: mdl-34981720

ABSTRACT

OBJECTIVE: The coronavirus disease 2019 (COVID-19) pandemic continues to present a major challenge to public health. Vaccine development requires an understanding of the kinetics of neutralizing antibody (NAb) responses to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). METHODS: In total, 605 serum samples from 125 COVID-19 patients (from January 1 to March 14, 2020) varying in age, sex, severity of symptoms, and presence of underlying diseases were collected, and antibody titers were measured using a micro-neutralization assay with wild-type SARS-CoV-2. RESULTS: NAbs were detectable approximately 10 days post-onset (dpo) of symptoms and peaked at approximately 20 dpo. The NAb levels were slightly higher in young males and severe cases, while no significant difference was observed for the other classifications. In follow-up cases, the NAb titer had increased or stabilized in 18 cases, whereas it had decreased in 26 cases, and in one case NAbs were undetectable at the end of our observation. Although a decreasing trend in NAb titer was observed in many cases, the NAb level was generally still protective. CONCLUSION: We demonstrated that NAb levels vary among all categories of COVID-19 patients. Long-term studies are needed to determine the longevity and protective efficiency of NAbs induced by SARS-CoV-2.


Subject(s)
Antibodies, Neutralizing/immunology , Antibodies, Viral/immunology , COVID-19/immunology , Adult , Aged , Aged, 80 and over , Female , Humans , Kinetics , Male , Middle Aged , Neutralization Tests , SARS-CoV-2
3.
Guang Pu Xue Yu Guang Pu Fen Xi ; 33(3): 628-31, 2013 Mar.
Article in Chinese | MEDLINE | ID: mdl-23705421

ABSTRACT

Nano-rutile TiO2 photocatalysts with bigger specific surface area were prepared by a hydrolysis method at 323 K, and characterized by X-ray diffraction (XRD), Brunauer-Emmett-Teller (BET), ultraviolet-visible diffuse reflection spectroscopy (UV-Vis DRS), infrared spectroscopy (IR) and photoelectrochemical (PEC). The ultraviolet (UV) and visible light photocatalytic activities of as-prepared rutile and anatase TiO2 nano-photocatalysts with almost same specific surface areas were evaluated by methyl orange (MO) as mode compound to photocatalytic reaction. The results of the photocatalytic experiment shows that when rutile and anatase have the similar specific surface area of approximately 95 m2.g-1, the UV light photocatalytic activity of rutile is comparable to that of anatase, while rutile shows significantly higher visible light photocatalytic activities than anatase. The photoelectrochemical experiment shows that the order of photocurrent densities of the catalysts from weak to strong is in accordance with the order of UV light photocatalytic activities of the catalysts from low to high under UV light irradiation.

4.
Ai Zheng ; 24(6): 735-9, 2005 Jun.
Article in Chinese | MEDLINE | ID: mdl-15946491

ABSTRACT

BACKGROUND & OBJECTIVE: Breast cancer may undergo metastasis in early phase. Distant metastasis, especially bone metastasis, may influence prognosis of breast cancer patients. Bone marrow micrometastasis (BMM) is difficult to detect with routine methods. This study was designed to evaluate expression and clinical significance of cytokeratin 19 (CK19) in bone marrow of patients with breast cancer. METHODS: Expression of CK19 mRNA in bone marrows of 65 breast cancer patients, 15 benign breast disease patients, and 8 healthy volunteers was detected by reverse transcription-polymerase chain reaction (RT-PCR). Correlation of CK19 mRNA expression to clinicopathologic features of the 65 breast cancer patients was analyzed. RESULTS: Positive rate of CK19 mRNA was 33.8% in the 65 breast cancer patients, and 0 in both benign breast disease patients and healthy volunteers. Expression of CK19 mRNA was positively correlated with tumor size and clinical stage (P < 0.05), but was not related to age and lymph node status (P > 0.05). In addition, positive rate of CK19 mRNA was positively correlated with carcinoembryonic antigen (CEA) in peripheral blood (r=0.372, P=0.002). CONCLUSIONS: CK19 mRNA may be used as a molecular marker to detect bone marrow micrometastasis in patients with breast cancer. The detection may help to select proper therapy and predict prognosis of breast cancer patients.


Subject(s)
Bone Marrow/metabolism , Breast Neoplasms/metabolism , Carcinoma, Ductal, Breast/metabolism , Keratin-19/biosynthesis , Adult , Aged , Breast Neoplasms/pathology , Breast Neoplasms, Male/metabolism , Breast Neoplasms, Male/pathology , Carcinoembryonic Antigen/blood , Carcinoma, Ductal, Breast/pathology , Female , Fibroadenoma/blood , Fibroadenoma/metabolism , Fibroadenoma/pathology , Humans , Keratin-19/genetics , Lymphatic Metastasis , Male , Middle Aged , Neoplasm Staging , RNA, Messenger/biosynthesis , RNA, Messenger/genetics
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