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1.
Front Med (Lausanne) ; 9: 842991, 2022.
Article in English | MEDLINE | ID: mdl-35433768

ABSTRACT

Myalgic Encephalomyelitis/Chronic Fatigue Syndrome (ME/CFS), a chronic disease characterized by long-lasting persistent debilitating widespread fatigue and post-exertional malaise, remains diagnosed by clinical criteria. Our group and others have identified differentially expressed miRNA profiles in the blood of patients. However, their diagnostic power individually or in combinations seems limited. A Partial Least Squares-Discriminant Analysis (PLS-DA) model initially based on 817 variables: two demographic, 34 blood analytic, 136 PBMC miRNAs, 639 Extracellular Vesicle (EV) miRNAs, and six EV features, selected an optimal number of five components, and a subset of 32 regressors showing statistically significant discriminant power. The presence of four EV-features (size and z-values of EVs prepared with or without proteinase K treatment) among the 32 regressors, suggested that blood vesicles carry relevant disease information. To further explore the features of ME/CFS EVs, we subjected them to Raman micro-spectroscopic analysis, identifying carotenoid peaks as ME/CFS fingerprints, possibly due to erythrocyte deficiencies. Although PLS-DA analysis showed limited capacity of Raman fingerprints for diagnosis (AUC = 0.7067), Raman data served to refine the number of PBMC miRNAs from our previous model still ensuring a perfect classification of subjects (AUC=1). Further investigations to evaluate model performance in extended cohorts of patients, to identify the precise ME/CFS EV components detected by Raman and to reveal their functional significance in the disease are warranted.

2.
BMJ Open ; 12(3): e061093, 2022 03 23.
Article in English | MEDLINE | ID: mdl-35321901

ABSTRACT

INTRODUCTION: Severe maternal morbidity (SMM)-an unexpected pregnancy-associated maternal outcome resulting in severe illness, prolonged hospitalisation or long-term disability-is recognised by many, as the preferred indicator of the quality of maternity care, especially in high-income countries. Obtaining comprehensive details on events and circumstances leading to SMM, obtained through maternity units, could complement data from large epidemiological studies and enable targeted interventions to improve maternal health. The aim of this study is to assess the feasibility of gathering such data from maternity units across Canadian provinces and territories, with the goal of establishing a national obstetric survey system for SMM in Canada. METHODS AND ANALYSIS: We propose a sequential explanatory mixed-methods study. We will first distribute a cross-sectional survey to leads of all maternity units across Canada to gather information on (1) Whether the unit has a system for reviewing SMM and the nature and format of this system, (2) Willingness to share anonymised data on SMM by direct entry using a web-based platform and (3) Respondents' perception on the definition and leading causes of SMM at a local level. This will be followed by semistructured interviews with respondent groups defined a priori, to identify barriers and facilitators for data sharing. We will perform an integrated analysis to determine feasibility outcomes, a narrative description of barriers and facilitators for data-sharing and resource implications for data acquisition on an annual basis, and variations in top-5 causes of SMM. ETHICS AND DISSEMINATION: The study has been approved by the Mount Sinai and Hamilton Integrated Research Ethics Boards. The study findings will be presented at annual scientific meetings of the Society of Obstetricians and Gynaecologists of Canada, North American Society of Obstetric Medicine, and International Network of Obstetric Survey Systems and published in an open-access peer-reviewed Obstetrics and Gynaecology or General Internal Medicine journal.


Subject(s)
Maternal Health Services , Canada/epidemiology , Cross-Sectional Studies , Feasibility Studies , Female , Humans , Pregnancy , Pregnancy Outcome , Severity of Illness Index
3.
JAMA Netw Open ; 4(5): e219041, 2021 05 03.
Article in English | MEDLINE | ID: mdl-33970256

ABSTRACT

Importance: Patient-reported outcomes in the treatment of opioid dependence may differ between subcutaneously administered depot buprenorphine and daily sublingual buprenorphine. Objective: To compare patient satisfaction between depot buprenorphine and sublingual buprenorphine in adult outpatients with opioid dependence. Design, Setting, and Participants: This open-label, randomized clinical trial was conducted among adult patients with opioid dependence at 6 outpatient clinical sites in Australia from October 2018 to September 2019. Data analysis was conducted from October 2019 to May 2020. Interventions: Participants were randomized to receive treatment with weekly or monthly depot buprenorphine or daily sublingual buprenorphine over 24 weeks. Main Outcomes and Measures: The primary end point was the difference in global treatment satisfaction, assessed by the Treatment Satisfaction Questionnaire for Medication (TSQM) version 1.4 (range, 0-100; higher score indicates greater satisfaction) at week 24. Secondary end points included other patient-reported outcomes, including quality of life, treatment burden, and health-related outcomes, as well as measures of opioid use, retention in treatment, and safety. Results: A total of 119 participants (70 [58.8%] men; mean [SD] age, 44.4 [10.5] years) were enrolled, randomized to, and received either depot buprenorphine (60 participants [50.4%]) or sublingual buprenorphine (59 participants [49.6%]). From the initial sample of 120, a participant (0.8%) in the sublingual buprenorphine group withdrew consent and did not receive study treatment. All participants were receiving sublingual buprenorphine when enrolled. The mean TSQM global satisfaction score was significantly higher for the depot group compared with the sublingual group at week 24 (mean [SE] score, 82.5 [2.3] vs 74.3 [2.3]; difference, 8.2; 95% CI, 1.7 to 14.6; P = .01). Improved outcomes were also observed for several secondary end points after treatment with depot buprenorphine (eg, mean [SE] treatment burden assessed by the Treatment Burden Questionnaire global score, on which lower scores indicate lower burden: 13.2 [2.6] vs 28.6 [2.5]; difference, -15.4; 95% CI, -22.6 to -8.2; P < .001). Thirty-nine participants (65.0%) in the depot buprenorphine group experienced 117 adverse drug reactions, mainly injection site reactions of mild intensity following subcutaneous administration, and 12 participants (20.3%) in the sublingual buprenorphine group experienced 21 adverse drug reactions. No participants withdrew from the trial medication or the trial due to adverse events. Conclusions and Relevance: In this study, participants receiving depot buprenorphine reported improved treatment satisfaction compared with those receiving sublingual buprenorphine. The results highlight the application of patient-reported outcomes as alternative end points to traditional markers of substance use in addiction treatment outcome studies. Trial Registration: anzctr.org.au Identifier: ANZCTR12618001759280.


Subject(s)
Buprenorphine/therapeutic use , Narcotic Antagonists/therapeutic use , Opiate Substitution Treatment/methods , Opioid-Related Disorders/drug therapy , Administration, Sublingual , Adult , Buprenorphine/administration & dosage , Delayed-Action Preparations , Female , Humans , Injections, Subcutaneous , Male , Middle Aged , Narcotic Antagonists/administration & dosage , Patient Reported Outcome Measures , Surveys and Questionnaires
4.
J Reprod Infant Psychol ; 39(2): 166-179, 2021 04.
Article in English | MEDLINE | ID: mdl-31502862

ABSTRACT

Objective: To identify how Family Integrated Care (FICare) affected maternal stress and anxiety. Study Design: This secondary analysis of the FICare cluster randomised controlled trial included infants born between 1 April 2013 and 31 August 2015 at ≤33 weeks' gestation. Mothers completed the PSS:NICU and STAI questionnaires at enrolment and study day 21. Results: 1383 mothers completed the surveys at one or both time-points. The mean PSS:NICU and STAI scores at day 21 were significantly lower in the FICare mothers than controls (PSS:NICU mean [standard deviation] FICare 2.32 [0.75], control 2.48 [0.78], p = 0.0005; STAI FICare 70.8 [20.0], control 74.2 [19.6], p = 0.0004). The sights and sounds, looks and behaviour, and parental role PSS:NICU subscales and the state and trait STAI subscales were all significantly different between FIC are and controls at day 21. The magnitude of change in all stress and anxiety subscales was greater in the FICare group than controls. These differences remained significant after adjustment for confounders with the greatest change in the parental role (least-squares mean [95% confidence interval] FICare -0.65 [-0.72, 0.57], control -0.31 [-0.38, -0.24], p < 0.0001) and state anxiety subscales. Conclusion: FICare is effective at reducing NICU-related maternal stress and anxiety.


Subject(s)
Anxiety/therapy , Delivery of Health Care, Integrated/methods , Intensive Care Units, Neonatal , Parents/psychology , Stress, Psychological/therapy , Adult , Anxiety/diagnosis , Anxiety/psychology , Australia , Canada , Female , Humans , Infant, Newborn , New Zealand , Patient Care Team , Stress, Psychological/diagnosis , Stress, Psychological/psychology , Treatment Outcome
5.
J R Army Med Corps ; 163(5): 361-363, 2017 Oct.
Article in English | MEDLINE | ID: mdl-28341787

ABSTRACT

INTRODUCTION: Non-freezing cold injury (NFCI) remains largely under-reported, and is of particular importance in the armed forces where its prevalence is greatest. Iloprost, a synthetic prostaglandin I2 analogue, has previously been used with some success in the treatment of vasospastic and freezing cold injuries, although its role in NFCI remains unclear. CASE REPORT: An Iloprost infusion was used to treat the long-term sequelae of an ex-soldier suffering with ongoing pedal pain and loss of function 20 years after the initial NFCI insult sustained on military exercise. Following 5 days of iloprost infusion, he reported 4 weeks of markedly reduced pain and increased mobility before symptom relapse. A second infusion was thus given 3 months later, which resulted in increased pain and analgesic requirements. DISCUSSION: The use of iloprost in the treatment of NFCI is discussed and its use in a condition which physicians consistently struggle to treat effectively is considered. Careful counselling is recommended as symptoms may be worsened.


Subject(s)
Cold Injury , Iloprost , Pain , Vasodilator Agents , Adult , Cold Injury/complications , Cold Injury/physiopathology , Foot Injuries/complications , Foot Injuries/physiopathology , Humans , Iloprost/administration & dosage , Iloprost/adverse effects , Iloprost/therapeutic use , Infusions, Intravenous , Male , Military Personnel , Pain/drug therapy , Pain/etiology , United Kingdom , Vasodilator Agents/administration & dosage , Vasodilator Agents/adverse effects , Vasodilator Agents/therapeutic use
6.
Zebrafish ; 13 Suppl 1: S153-63, 2016 07.
Article in English | MEDLINE | ID: mdl-27248438

ABSTRACT

The zebrafish model system is helping researchers improve the health and welfare of people and animals and has become indispensable for advancing biomedical research. As genetic engineering is both resource intensive and time-consuming, sharing successfully developed genetically modified zebrafish lines throughout the international community is critical to research efficiency and to maximizing the millions of dollars in research funding. New restrictions on importation of zebrafish into Canada based on putative susceptibility to infection by the spring viremia of carp virus (SVCV) have been imposed on the scientific community. In this commentary, we review the disease profile of SVCV in fish, discuss the findings of the Canadian government's scientific assessment, how the interpretations of their assessment differ from that of the Canadian research community, and describe the negative impact of these regulations on the Canadian research community and public as it pertains to protecting the health of Canadians.


Subject(s)
Commerce/legislation & jurisprudence , Fish Diseases/prevention & control , Fish Diseases/transmission , Government Regulation , Rhabdoviridae Infections/veterinary , Zebrafish , Animals , Canada , Fish Diseases/virology , Rhabdoviridae/physiology , Rhabdoviridae Infections/prevention & control , Rhabdoviridae Infections/transmission , Rhabdoviridae Infections/virology
7.
Development ; 141(20): 3900-9, 2014 Oct.
Article in English | MEDLINE | ID: mdl-25231761

ABSTRACT

A central problem in development is how fates of closely related cells are segregated. Lineally related motoneurons (MNs) and interneurons (INs) express many genes in common yet acquire distinct fates. For example, in mouse and chick Lhx3 plays a pivotal role in the development of both cell classes. Here, we utilize the ability to recognize individual zebrafish neurons to examine the roles of Lhx3 and its paralog Lhx4 in the development of MNs and ventral INs. We show that Lhx3 and Lhx4 are expressed by post-mitotic axial MNs derived from the MN progenitor (pMN) domain, p2 domain progenitors and by several types of INs derived from pMN and p2 domains. In the absence of Lhx3 and Lhx4, early-developing primary MNs (PMNs) adopt a hybrid fate, with morphological and molecular features of both PMNs and pMN-derived Kolmer-Agduhr' (KA') INs. In addition, we show that Lhx3 and Lhx4 distinguish the fates of two pMN-derived INs. Finally, we demonstrate that Lhx3 and Lhx4 are necessary for the formation of late-developing V2a and V2b INs. In conjunction with our previous work, these data reveal that distinct transcription factor families are deployed in post-mitotic MNs to unequivocally assign MN fate and suppress the development of alternative pMN-derived IN fates.


Subject(s)
Gene Expression Regulation, Developmental , Interneurons/physiology , LIM-Homeodomain Proteins/physiology , Motor Neurons/physiology , Transcription Factors/physiology , Zebrafish Proteins/physiology , Animals , Axons/physiology , Cell Lineage , Gene Expression Profiling , Green Fluorescent Proteins/chemistry , Neurons/metabolism , Oligonucleotides/chemistry , Phenotype , Protein Structure, Tertiary , Signal Transduction , Spinal Cord/embryology , Zebrafish/embryology
8.
J Bone Joint Surg Am ; 96(4): e31, 2014 Feb 19.
Article in English | MEDLINE | ID: mdl-24553900

ABSTRACT

BACKGROUND: An investigation was conducted to establish the hospital-wide prevalence of cast saw injuries and to identify variables that put patients at increased risk, with the goal of reducing the injury rate. METHODS: Information was collected from January 2010 through December 2012 on all patients who had a cast removed or cut at our institution. Locations included the operating suites, emergency department, ambulatory clinics, and hospital floors. A cast cutting log was used to capture the total number of casts cut. An adverse event form was used to document each injury. A continuous quality improvement approach was used throughout the study period to implement incremental improvements to our program. Changes included an education and certification program on cast saw use for all providers, a protocol for a plastic surgery consultation, and a cast saw blade inspection protocol with maintenance logs. RESULTS: Twenty-nine injuries occurred in 23,615 cast cuttings over the three years, for an overall rate of 1.23 (95% confidence interval [CI], 0.86 to 1.76) per 1000. A minor decrease in cast saw injuries was recorded over the course of the study (eleven of 8043 [1.37 per 1000] in 2010, ten of 7885 [1.27 per 1000] in 2011, and eight of 7687 [1.04 per 1000] in 2012), but the decrease was not significant (p = 0.87). The emergency department had the highest rate of cast saw injuries (p < 0.0001), with a significantly greater rate during the night compared with the day (eleven of 1293 [8.51 per 1000] compared with fifteen of 19,419 [0.77 per 1000], respectively; p < 0.0001). The injuries were all minor. Key risk factors for a cast saw injury included provider inexperience, patient sedation, and poor cast saw blade condition. CONCLUSIONS: The rate of cast saw injuries in a busy pediatric orthopaedic department was small, but a considerably increased risk existed for those patients cared for in the emergency department by orthopaedic residents. Improving education and training in cast saw use has the potential to decrease the prevalence of cast saw injuries over time.


Subject(s)
Casts, Surgical/adverse effects , Intraoperative Complications/epidemiology , Intraoperative Complications/prevention & control , Surgical Instruments/adverse effects , Clinical Competence , Emergency Service, Hospital , Humans , Incidence , Prevalence , Quality Improvement , Risk Factors
9.
Neural Dev ; 7: 35, 2012 Nov 05.
Article in English | MEDLINE | ID: mdl-23122226

ABSTRACT

BACKGROUND: Precise matching between motoneuron subtypes and the muscles they innervate is a prerequisite for normal behavior. Motoneuron subtype identity is specified by the combination of transcription factors expressed by the cell during its differentiation. Here we investigate the roles of Mnx family transcription factors in specifying the subtypes of individually identified zebrafish primary motoneurons. RESULTS: Zebrafish has three Mnx family members. We show that each of them has a distinct and temporally dynamic expression pattern in each primary motoneuron subtype. We also show that two Mnx family members are expressed in identified VeLD interneurons derived from the same progenitor domain that generates primary motoneurons. Surprisingly, we found that Mnx proteins appear unnecessary for differentiation of VeLD interneurons or the CaP motoneuron subtype. Mnx proteins are, however, required for differentiation of the MiP motoneuron subtype. We previously showed that MiPs require two temporally-distinct phases of Islet1 expression for normal development. Here we show that in the absence of Mnx proteins, the later phase of Islet1 expression is initiated but not sustained, and MiPs become hybrids that co-express morphological and molecular features of motoneurons and V2a interneurons. Unexpectedly, these hybrid MiPs often extend CaP-like axons, and some MiPs appear to be entirely transformed to a CaP morphology. CONCLUSIONS: Our results suggest that Mnx proteins promote MiP subtype identity by suppressing both interneuron development and CaP axon pathfinding. This is, to our knowledge, the first report of transcription factors that act to distinguish CaP and MiP subtype identities. Our results also suggest that MiP motoneurons are more similar to V2 interneurons than are CaP motoneurons.


Subject(s)
Gene Expression Regulation, Developmental/physiology , Interneurons/physiology , Motor Neurons/classification , Motor Neurons/physiology , Transcription Factors/metabolism , Zebrafish Proteins/metabolism , Animals , Animals, Genetically Modified , Cell Differentiation/genetics , Embryo, Nonmammalian , Gene Expression Regulation, Developmental/drug effects , Gene Expression Regulation, Developmental/genetics , Green Fluorescent Proteins/genetics , Interneurons/drug effects , LIM-Homeodomain Proteins/genetics , LIM-Homeodomain Proteins/metabolism , Morpholinos/pharmacology , Motor Neurons/drug effects , Spinal Cord/cytology , Spinal Cord/embryology , Transcription Factors/genetics , Zebrafish , Zebrafish Proteins/genetics
10.
PLoS Genet ; 8(8): e1002849, 2012.
Article in English | MEDLINE | ID: mdl-22876193

ABSTRACT

Since the beginnings of domestication, the craniofacial architecture of the domestic dog has morphed and radiated to human whims. By beginning to define the genetic underpinnings of breed skull shapes, we can elucidate mechanisms of morphological diversification while presenting a framework for understanding human cephalic disorders. Using intrabreed association mapping with museum specimen measurements, we show that skull shape is regulated by at least five quantitative trait loci (QTLs). Our detailed analysis using whole-genome sequencing uncovers a missense mutation in BMP3. Validation studies in zebrafish show that Bmp3 function in cranial development is ancient. Our study reveals the causal variant for a canine QTL contributing to a major morphologic trait.


Subject(s)
Bone Morphogenetic Protein 3/genetics , Craniosynostoses/genetics , Dogs/genetics , Genetic Variation , Quantitative Trait Loci , Skull/metabolism , Animals , Biological Evolution , Breeding , Chromosome Mapping , Genome-Wide Association Study , Genotype , Humans , Mutation, Missense , Pets , Phenotype , Skull/anatomy & histology , Zebrafish/genetics
11.
Dev Biol ; 368(2): 261-72, 2012 Aug 15.
Article in English | MEDLINE | ID: mdl-22659140

ABSTRACT

The regulation of cell cycle rate is essential for the correct timing of proliferation and differentiation during development. Changes to cell cycle rate can have profound effects on the size, shape and cell types of a developing organ. We previously identified a zebrafish mutant ceylon (cey) that has a severe reduction in T cells and hematopoietic stem/progenitor cells (HSPCs). Here we find that the cey phenotype is due to absence of the gene transducin (beta)-like 3 (tbl3). The tbl3 homolog in yeast regulates the cell cycle by maintaining rRNA levels and preventing p53-induced cell death. Zebrafish tbl3 is maternally expressed, but later in development its expression is restricted to specific tissues. Tissues expressing tbl3 are severely reduced in cey mutants, including HSPCs, the retina, exocrine pancreas, intestine, and jaw cartilage. Specification of these tissues is normal, suggesting the reduced size is due to a reduced number of differentiated cells. Tbl3 MO injection into either wild-type or p53-/- mutant embryos phenocopies cey, indicating that loss of tbl3 causes specific defects in cey. Progression of both hematopoietic and retinal development is delayed beginning at 3 day post fertilization due to a slowing of the cell cycle. In contrast to yeast, reduction of Tbl3 causes a slowing of the cell cycle without a corresponding increase in p53 induced cell death. These data suggest that tbl3 plays a tissue-specific role regulating cell cycle rate during development.


Subject(s)
Cell Cycle Proteins/genetics , Cell Cycle/genetics , Embryo, Nonmammalian/metabolism , Zebrafish Proteins/genetics , Zebrafish/metabolism , Animals , Animals, Genetically Modified , Apoptosis/genetics , Blotting, Northern , Cell Cycle Proteins/metabolism , Cell Differentiation/genetics , Cell Proliferation , Embryo, Nonmammalian/cytology , Embryo, Nonmammalian/embryology , Female , Gene Expression Regulation, Developmental , Gene Knockdown Techniques , Green Fluorescent Proteins/genetics , Green Fluorescent Proteins/metabolism , In Situ Hybridization , Male , Microscopy, Fluorescence , Mutation , Retina/cytology , Retina/embryology , Retina/metabolism , Time Factors , Zebrafish/embryology , Zebrafish Proteins/metabolism
12.
PLoS One ; 6(2): e14646, 2011 Feb 03.
Article in English | MEDLINE | ID: mdl-21304910

ABSTRACT

Murine cytomegalovirus (MCMV) is an important animal model of human cytomegalovirus (HCMV), a ß-Herpesvirus that infects the majority of the world's population and causes disease in neonates and immunocompromised adults. CD8(+) T cells are a major part of the immune response to MCMV and HCMV. Processing of peptides for presentation to CD8(+) T cells may be critically dependent on the immunoproteasome, expression of which is affected by MCMV. However, the overall importance of the immunoproteasome in the generation of immunodominant peptides from MCMV is not known. We therefore examined the role of the immunoproteasome in stimulation of CD8(+) T cell responses to MCMV - both conventional memory responses and those undergoing long-term expansion or "inflation". We infected LMP7(-/-) and C57BL/6 mice with MCMV or with newly-generated recombinant vaccinia viruses (rVVs) encoding the immunodominant MCMV protein M45 in either full-length or epitope-only minigene form. We analysed CD8(+) T cell responses using intracellular cytokine stain (ICS) and MHC Class I tetramer staining for a panel of MCMV-derived epitopes. We showed a critical role for immunoproteasome in MCMV affecting all epitopes studied. Interestingly we found that memory "inflating" epitopes demonstrate reduced immunoproteasome dependence compared to non-inflating epitopes. M45-specific responses induced by rVVs remain immunoproteasome-dependent. These results help to define a critical restriction point for CD8(+) T cell epitopes in natural cytomegalovirus (CMV) infection and potentially in vaccine strategies against this and other viruses.


Subject(s)
CD8-Positive T-Lymphocytes/physiology , Immunity, Cellular/genetics , Muromegalovirus/immunology , Proteasome Endopeptidase Complex/physiology , Amino Acid Sequence , Animals , CD8-Positive T-Lymphocytes/immunology , CD8-Positive T-Lymphocytes/metabolism , Herpesviridae Infections/genetics , Herpesviridae Infections/immunology , Immunity, Cellular/immunology , Immunodominant Epitopes/immunology , Immunodominant Epitopes/metabolism , Mice , Mice, Inbred C57BL , Mice, Knockout , Models, Biological , Proteasome Endopeptidase Complex/genetics , Proteasome Endopeptidase Complex/metabolism , Time Factors
13.
Aust N Z J Public Health ; 34(3): 258-61, 2010 Jun.
Article in English | MEDLINE | ID: mdl-20618266

ABSTRACT

OBJECTIVE: Detecting and eliminating ethnic disparities in access to and outcomes of healthcare relies on accurate ethnicity recording. Studies have shown that there are inaccuracies in ethnicity data in New Zealand and elsewhere. This study examined coverage and accuracy of ethnicity data for three Asian ethnic groups. METHODS: Student researchers from, or with links to, the ethnic groups concerned worked with communities to recruit participants. Names and dates of birth, length of residence in New Zealand and immigration status were recorded. Names and dates of birth were sent to the New Zealand Health Information Service, which attempted to link them with National Health Index ethnicity data. RESULTS: Only 72% of participants could be linked to an NHI number, and only 48% of those had their ethnicity recorded accurately. Linkage odds were lower for older people, and accuracy was higher for Chinese people compared to the other ethnicities. Length of residence and immigration status did not affect either coverage or accuracy. CONCLUSION: Most participants who could be linked had their ethnicity recorded in the broader category of "Asian", but accuracy was poor at the sub-group level. IMPLICATIONS: Extreme caution should be applied when examining data about sub-groups within the 'Asian' category.


Subject(s)
Asian People/statistics & numerical data , Emigrants and Immigrants/statistics & numerical data , Ethnicity/statistics & numerical data , Ethnology/statistics & numerical data , Adolescent , Adult , Aged , Aged, 80 and over , Data Collection , Ethnicity/classification , Female , Forms and Records Control/statistics & numerical data , Healthcare Disparities , Humans , Logistic Models , Male , Middle Aged , New Zealand , Odds Ratio , Young Adult
14.
J Immunol ; 184(4): 1829-1839, 2010 Feb 15.
Article in English | MEDLINE | ID: mdl-20053942

ABSTRACT

Although several cancer immunotherapy strategies are based on the use of analog peptides and on the modulation of the TCR affinity of adoptively transferred T cells, it remains unclear whether tumor-specific T cell activation by strong and weak TCR stimuli evoke different Ca(2+) signatures from the Ca(2+) intracellular stores and whether the amplitude of Ca(2+) release from the endoplasmic reticulum (ER) can be further modulated by coreceptor binding to peptide/MHC. In this study, we combined functional, structural, and kinetic measurements to correlate the intensity of Ca(2+) signals triggered by the stimulation of the 1G4 T cell clone specific to the tumor epitope NY-ESO-1(157-165). Two analogs of the NY-ESO-1(157-165) peptide, having similar affinity to HLA-A2 molecules, but a 6-fold difference in binding affinity for the 1G4 TCR, resulted in different Ca(2+) signals and T cell activation. 1G4 stimulation by the stronger stimulus emptied the ER of stored Ca(2+), even in the absence of CD8 binding, resulting in sustained Ca(2+) influx. In contrast, the weaker stimulus induced only partial emptying of stored Ca(2+), resulting in significantly diminished and oscillatory Ca(2+) signals, which were enhanced by CD8 binding. Our data define the range of TCR/peptide MHC affinities required to induce depletion of Ca(2+) from intracellular stores and provide insights into the ability of T cells to tailor the use of the CD8 coreceptor to enhance Ca(2+) release from the ER. This, in turn, modulates Ca(2+) influx from the extracellular environment, ultimately controlling T cell activation.


Subject(s)
Calcium/metabolism , Endoplasmic Reticulum/metabolism , Epitopes, T-Lymphocyte/immunology , Neoplasm Proteins/immunology , Peptide Fragments/immunology , Receptors, Antigen, T-Cell/metabolism , T-Lymphocyte Subsets/immunology , T-Lymphocyte Subsets/metabolism , Clone Cells , Crystallography, X-Ray , Cytoplasmic Granules/immunology , Cytoplasmic Granules/metabolism , Cytotoxicity Tests, Immunologic , Endoplasmic Reticulum/immunology , Epitopes, T-Lymphocyte/metabolism , Humans , Lymphocyte Activation/immunology , Neoplasm Proteins/metabolism , Peptide Fragments/metabolism , Protein Binding/immunology , Protein Isoforms/immunology , Protein Isoforms/metabolism , Receptors, Antigen, T-Cell/physiology
15.
Dev Dyn ; 237(9): 2575-84, 2008 Sep.
Article in English | MEDLINE | ID: mdl-18729230

ABSTRACT

Generation of mature T lymphocytes requires an intact hematopoietic stem cell compartment and functional thymic epithelium. We used the zebrafish (Danio rerio) to isolate mutations that affect the earliest steps in T lymphopoiesis and thymic organogenesis. Here we describe the results of a genetic screen in which gynogenetic diploid offspring from heterozygous females were analyzed by whole-mount in situ hybridization for the expression of rag-1. To assess immediately if a global defect in hematopoiesis resulted in the mutant phenotype, alpha-embryonic globin expression was simultaneously assayed for multilineage defects. In this report, we present the results obtained with this strategy and show representative mutant phenotypes affecting early steps in T-cell development and/or thymic epithelial cell development. We discuss the advantage of this strategy and the general usefulness of the zebrafish as a model system for vertebrate lymphopoiesis and thymic organogenesis.


Subject(s)
Gene Expression Regulation, Developmental , T-Lymphocytes/metabolism , Thymus Gland/metabolism , Zebrafish/genetics , Animals , Branchial Region/embryology , Branchial Region/metabolism , Forkhead Transcription Factors/genetics , Hematopoiesis/genetics , Hematopoiesis/physiology , Homeodomain Proteins/genetics , Ikaros Transcription Factor/genetics , In Situ Hybridization , T-Lymphocytes/cytology , Thymus Gland/cytology , Thymus Gland/embryology , Zebrafish/embryology , Zebrafish Proteins/genetics
16.
Biotechniques ; 43(5): 610, 612, 614, 2007 Nov.
Article in English | MEDLINE | ID: mdl-18072590

ABSTRACT

Here we describe a method for the isolation of PCR-ready genomic DNA from various zebrafish tissues that is based on a previously published murine protocol. The DNA solutions are of sufficient quality to allow PCR detection of transgenes from all commonly used zebrafish tissues. In sperm, transgene amplification was successful even when diluted 1000-fold, allowing easy identification of transgenic founders. Given its speed and low cost, we anticipate that the adoption of this method will streamline DNA isolation for zebrafish research.


Subject(s)
DNA/isolation & purification , Genome , Polymerase Chain Reaction/methods , Zebrafish/genetics , Animals , Green Fluorescent Proteins/metabolism , Organ Specificity , Transgenes
17.
Eur J Immunol ; 37(5): 1323-33, 2007 May.
Article in English | MEDLINE | ID: mdl-17429845

ABSTRACT

CD8(+) cytotoxic T lymphocytes (CTL) are key determinants of immunity to intracellular pathogens and neoplastic cells. Recognition of specific antigens in the form of peptide-MHC class I complexes (pMHCI) presented on the target cell surface is mediated by T cell receptor (TCR) engagement. The CD8 coreceptor binds to invariant domains of pMHCI and facilitates antigen recognition. Here, we investigate the biological effects of a Q115E substitution in the alpha2 domain of human leukocyte antigen (HLA)-A*0201 that enhances CD8 binding by approximately 50% without altering TCR/pMHCI interactions. Soluble and cell surface-expressed forms of Q115E HLA-A*0201 exhibit enhanced recognition by CTL without loss of specificity. These CD8-enhanced antigens induce greater CD3 zeta chain phosphorylation in cognate CTL leading to substantial increases in cytokine production, proliferation and priming of naive T cells. This effect provides a fundamental new mechanism with which to enhance cellular immunity to specific T cell antigens.


Subject(s)
Antigen Presentation/immunology , CD8 Antigens/metabolism , HLA-A Antigens/genetics , HLA-A Antigens/metabolism , Lymphocyte Activation/immunology , T-Lymphocytes, Cytotoxic/immunology , Amino Acid Sequence , Antigen Presentation/genetics , CD8 Antigens/chemistry , CD8 Antigens/immunology , Epitopes, T-Lymphocyte/immunology , HLA-A Antigens/immunology , HLA-A2 Antigen , Humans , Molecular Sequence Data , Mutation , Protein Structure, Quaternary , Receptors, Antigen, T-Cell/immunology , Surface Plasmon Resonance , Transfection
18.
Development ; 134(9): 1671-7, 2007 May.
Article in English | MEDLINE | ID: mdl-17376808

ABSTRACT

The ability of animals to carry out their normal behavioral repertoires requires exquisitely precise matching between specific motoneuron subtypes and the muscles they innervate. However, the molecular mechanisms that regulate motoneuron subtype specification remain unclear. Here, we use individually identified zebrafish primary motoneurons to describe a novel role for Nkx6 and Islet1 proteins in the specification of vertebrate motoneuron subtypes. We show that zebrafish primary motoneurons express two related Nkx6 transcription factors. In the absence of both Nkx6 proteins, the CaP motoneuron subtype develops normally, whereas the MiP motoneuron subtype develops a more interneuron-like morphology. In the absence of Nkx6 function, MiPs exhibit normal early expression of islet1, which is required for motoneuron formation; however, they fail to maintain islet1 expression. Misexpression of islet1 RNA can compensate for loss of Nkx6 function, providing evidence that Islet1 acts downstream of Nkx6. We suggest that Nkx6 proteins regulate MiP development at least in part by maintaining the islet1 expression that is required both to promote the MiP subtype and to suppress interneuron development.


Subject(s)
Homeodomain Proteins/genetics , Homeodomain Proteins/metabolism , Motor Neurons/cytology , Transcription Factors/metabolism , Zebrafish Proteins/metabolism , Animals , Interneurons/cytology , Interneurons/metabolism , LIM-Homeodomain Proteins , Motor Neurons/metabolism , Transcription Factors/genetics , Zebrafish , Zebrafish Proteins/genetics
19.
Eur J Immunol ; 37(2): 479-86, 2007 Feb.
Article in English | MEDLINE | ID: mdl-17273992

ABSTRACT

HLA-A*6801 exhibits several unusual features. First, it is known to bind weakly to CD8 due to the presence of an A245V substitution in the alpha3 domain. Second, it is able to accommodate unusually long peptides as a result of peptide 'kinking' in the binding groove. Third, CD8+ cytotoxic T lymphocytes that recognise HLA-A*6801-restricted antigens can tolerate substantial changes in the peptide sequence without apparent loss of recognition. In addition, it has been suggested that HLA-A68-restricted TCR might bind with higher affinity than other TCR due to their selection in the presence of a decreased contribution from CD8. Here we (1) examine monoclonal T cell recognition of an HLA-A*6801-restricted HIV-1 Tat-derived 11-amino acid peptide (ITKGLGISYGR) and natural variant sequences thereof; (2) measure the affinity and kinetics of a TCR/pHLA-A68 interaction biophysically for the first time, showing that equilibrium binding occurs within the range previously determined for non-HLA-A68-restricted TCR (KD approx. 7 microM); and (3) show that "normalization" of the non-canonical HLA-A*6801 CD8-binding domain enhances recognition of agonist peptides without inducing non-specific activation. This latter effect may provide a fundamental new mechanism with which to enhance T cell immunity to specific antigens.


Subject(s)
HIV Antigens/immunology , HIV Infections/immunology , HLA-A Antigens/immunology , Receptors, Antigen, T-Cell/biosynthesis , Receptors, Antigen, T-Cell/immunology , Adult , CD8 Antigens/immunology , HIV Antigens/genetics , HIV-1/immunology , HLA-A Antigens/biosynthesis , Humans , Lymphocyte Activation/immunology , Male , Polymerase Chain Reaction , Surface Plasmon Resonance , T-Lymphocytes, Cytotoxic/immunology
20.
Antioxid Redox Signal ; 8(3-4): 338-46, 2006.
Article in English | MEDLINE | ID: mdl-16677079

ABSTRACT

Fibrillin-1 is a 350 kDa calcium-binding protein which assembles to form 10-12 nm microfibrils in the extracellular matrix (ECM). The structure of fibrillin-1 is dominated by two types of disulfide-rich motifs, the calcium- binding epidermal growth factor-like (cbEGF) and transforming growth factor beta binding protein-like (TB) domains. Disruption of fibrillin-1 domain structure and function contributes to the pathogenic mechanisms underlying two inherited diseases with very different etiologies: Marfan syndrome (MFS) and homocystinuria (HC). MFS is a connective tissue disease caused by mutations in the fibrillin-1 gene FBN1. Many missense mutations cause variable degrees of fibrillin-1 domain misfolding, which may affect the delivery of fibrillin-1 to the ECM and/or its assembly into microfibrils. HC is a metabolic disorder which affects methionine metabolism and results in raised serum levels of the highly reactive thiol-containing amino acid homocysteine. Patients with HC often exhibit ocular and skeletal defects resembling the MFS phenotype, suggesting that elevated homocysteine levels may lead to chemical reduction of disulfide bonds within fibrillin-1 domains resulting in the loss of native structure. Protein misfolding therefore is implicated in pathogenic mechanisms underlying MFS and HC.


Subject(s)
Microfilament Proteins/chemistry , Amino Acid Sequence , Animals , Extracellular Matrix/metabolism , Fibrillin-1 , Fibrillins , Homocystinuria/metabolism , Humans , Marfan Syndrome/metabolism , Molecular Sequence Data , Protein Conformation , Protein Denaturation , Protein Folding , Protein Structure, Tertiary , Transforming Growth Factor beta/metabolism
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