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1.
PLoS Genet ; 14(7): e1007487, 2018 07.
Article in English | MEDLINE | ID: mdl-29995892

ABSTRACT

Altered glucose and lipid metabolism fuel cystic growth in polycystic kidneys, but the cause of these perturbations is unclear. Renal cysts also associate with mutations in Bicaudal C1 (Bicc1) or in its self-polymerizing sterile alpha motif (SAM). Here, we found that Bicc1 maintains normoglycemia and the expression of the gluconeogenic enzymes FBP1 and PEPCK in kidneys. A proteomic screen revealed that Bicc1 interacts with the C-Terminal to Lis-Homology domain (CTLH) complex. Since the orthologous Gid complex in S. cerevisae targets FBP1 and PEPCK for degradation, we mapped the topology among CTLH subunits and found that SAM-mediated binding controls Bicc1 protein levels, whereas Bicc1 inhibited the accumulation of several CTLH subunits. Under the conditions analyzed, Bicc1 increased FBP1 protein levels independently of the CTLH complex. Besides linking Bicc1 to cell metabolism, our findings reveal new layers of complexity in the regulation of renal gluconeogenesis compared to lower eukaryotes.


Subject(s)
Gluconeogenesis/physiology , Glucose/biosynthesis , Kidney/metabolism , Polycystic Kidney Diseases/pathology , RNA-Binding Proteins/metabolism , Animals , Animals, Newborn , Blood Glucose , Fructose-Bisphosphatase/metabolism , Glucose/analysis , HEK293 Cells , Humans , Mice , Mice, Inbred C57BL , Mice, Transgenic , Mutation , Phosphoenolpyruvate Carboxykinase (GTP)/metabolism , Protein Binding/physiology , Protein Interaction Mapping , Protein Multimerization/physiology , RNA, Messenger/metabolism , Sterile Alpha Motif/physiology
2.
Structure ; 26(2): 209-224.e6, 2018 02 06.
Article in English | MEDLINE | ID: mdl-29290488

ABSTRACT

Head-to-tail polymers of sterile alpha motifs (SAM) can scaffold large macromolecular complexes. Several SAM-domain proteins that bind each other are mutated in patients with cystic kidneys or laterality defects, including the Ankyrin (ANK) and SAM domain-containing proteins ANKS6 and ANKS3, and the RNA-binding protein Bicc1. To address how their interactions are regulated, we first determined a high-resolution crystal structure of a Bicc1-SAM polymer, revealing a canonical SAM polymer with a high degree of flexibility in the subunit interface orientations. We further mapped interactions between full-length and distinct domains of Bicc1, ANKS3, and ANKS6. Neither ANKS3 nor ANKS6 alone formed macroscopic homopolymers in vivo. However, ANKS3 recruited ANKS6 to Bicc1, and the three proteins together cooperatively generated giant macromolecular complexes. Thus, the giant assemblies are shaped by SAM domains, their flanking sequences, and SAM-independent protein-protein and protein-mRNA interactions.


Subject(s)
Carrier Proteins/chemistry , Ciliopathies/metabolism , Nuclear Proteins/chemistry , RNA-Binding Proteins/chemistry , Crystallography, X-Ray , HEK293 Cells , HeLa Cells , Humans , Polymers , Protein Conformation , Sterile Alpha Motif
3.
Front Psychol ; 5: 303, 2014.
Article in English | MEDLINE | ID: mdl-24782805

ABSTRACT

Novelty preference is pervasive in mammalian species, and describes an inherent tendency to preferentially explore novelty. The novel location memory task studied here assesses the ability of animals to form accurate memories of a spatial configuration, consisting of several identical objects placed within an arena. Tree shrews were first familiarized with a particular object configuration during several sessions, and then an object was displaced during a test session. Tree shrews exhibited enhanced exploration when confronted with this novel configuration. The most reliable indicator associated with novelty preference was an enhancement in directed exploration towards the novel object, although we also observed a non-specific overall increase in exploration in one experiment. During the test session, we also observed an exploration of the location, which had previously been occupied by the displaced object, an effect termed empty quadrant. Our behavioral findings suggest multiple stages of spatial memory formation in tree shrews that are associated with various forms of behavioral responses to novelty. Reduced novelty preference has been linked to major depressive disorder in human patients. Given the established social conflict depression model in tree shrews, we anticipate that the study of the neural circuits of novelty preference and their malfunction during depression may have implications for understanding or treating depression in humans.

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