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1.
Adv Healthc Mater ; 11(11): e2102068, 2022 06.
Article in English | MEDLINE | ID: mdl-35120280

ABSTRACT

Emerging biomanufacturing technologies have revolutionized the field of tissue engineering by offering unprecedented possibilities. Over the past few years, new opportunities arose by combining traditional and novel fabrication techniques, shaping the hybrid designs in biofabrication. One of the potential application fields is skin tissue engineering, in which a combination of traditional principles of wound dressing with advanced biofabrication methods could yield more efficient therapies. In this study, a hybrid design of fiber-reinforced scaffolds combined with gel casting is developed and the efficiency for in vivo wound healing applications is assessed. For this purpose, 3D fiber meshes produced by melt electrowriting are selectively filled with photocrosslinkable gelatin hydrogel matrices loaded with different growth factor carrier microspheres. Additionally, the influence of the inclusion of inorganic bioactive glass particles within the composite fibrous mesh is evaluated. Qualitative evaluation of secondary wound healing criteria and histological analysis shows that hybrid scaffolds containing growth factors and bioactive glass enhances the healing process significantly, compared to the designs merely providing a fiber-reinforced bioactive hydrogel matrix as the wound dressing. This study aims to explore a new application area for melt electrowriting as a powerful tool in fabricating hybrid therapeutic designs for skin tissue engineering.


Subject(s)
Hydrogels , Wound Healing , Bandages , Gelatin , Tissue Engineering/methods , Tissue Scaffolds
2.
Mol Inform ; 41(2): e2100062, 2022 02.
Article in English | MEDLINE | ID: mdl-34529322

ABSTRACT

In the current study, we used 7922 FDA approved small molecule drugs as well as compounds in clinical investigation from NIH's NPC database in our drug repurposing study. SARS-CoV-2 main protease as well as Spike protein/ACE2 targets were used in virtual screening and top-100 compounds from each docking simulations were considered initially in short molecular dynamics (MD) simulations and their average binding energies were calculated by MM/GBSA method. Promising hit compounds selected based on average MM/GBSA scores were then used in long MD simulations. Based on these numerical calculations following compounds were found as hit inhibitors for the SARS-CoV-2 main protease: Pinokalant, terlakiren, ritonavir, cefotiam, telinavir, rotigaptide, and cefpiramide. In addition, following 3 compounds were identified as inhibitors for Spike/ACE2: Denopamine, bometolol, and rotigaptide. In order to verify the predictions of in silico analyses, 4 compounds (ritonavir, rotigaptide, cefotiam, and cefpiramide) for the main protease and 2 compounds (rotigaptide and denopamine) for the Spike/ACE2 interactions were tested by in vitro experiments. While the concentration-dependent inhibition of the ritonavir, rotigaptide, and cefotiam was observed for the main protease; denopamine was effective at the inhibition of Spike/ACE2 binding.


Subject(s)
Antiviral Agents , Drug Repositioning , Drugs, Investigational/pharmacology , SARS-CoV-2/drug effects , Angiotensin-Converting Enzyme 2 , Antiviral Agents/pharmacology , Cefotiam/pharmacology , Coronavirus 3C Proteases/antagonists & inhibitors , Drug Evaluation, Preclinical , Humans , Molecular Docking Simulation , Ritonavir/pharmacology , Spike Glycoprotein, Coronavirus/antagonists & inhibitors , COVID-19 Drug Treatment
3.
Turk Neurosurg ; 31(6): 896-906, 2021.
Article in English | MEDLINE | ID: mdl-34169989

ABSTRACT

AIM: To study the changes in the distribution of and the transcriptional levels associated with α4- and α7-subtype nicotinic acetylcholine receptors (nAChRs) in the primary somatosensory (S1) and motor (M1) cortices of rats after electrical stimulation of the basal forebrain (BF). MATERIAL AND METHODS: Immunofluorescence (IF) analyses were performed on brain sections from 20 rats (experimental groups: controls, contralateral, and ipsilateral to BF stimulation). The nAChR receptor complexes were labeled with antibodies and counted (N) in the cortical layers of the hindlimb representation (S1HL), barrel field (S1BF), and M1. To determine the relative transcriptional mRNA levels, qRT-PCR was performed with tissue from the associated brain regions of 14 different animals in two groups, controls and BF stimulation. RESULTS: For all three tested brain regions, N and D (density) of the α7-subtype nAChR increased in both ipsilateral and contralateral hemispheres after BF stimulation. There was no change in N and D of the α4 subtype. Regardless of BF stimulation, N of both subtypes was lower in M1 compared to S1HL and S1BF, and D was highest in layers II-IV. BF stimulation had no significant effect on the relative mRNA levels of both receptor subtypes. CONCLUSION: The results show an upregulation of the α7-subtype nAChR as a result of BF stimulation, based on receptor-complex counts on IF images. However, this change was not reflected in mRNA levels, which suggest post-translational modifications. Overall, this study suggests structural changes from the effects of cholinergic projections to the somatosensory and motor cortices.


Subject(s)
Basal Forebrain , Receptors, Nicotinic , Animals , Basal Forebrain/metabolism , Electric Stimulation , RNA, Messenger , Rats , Receptors, Nicotinic/genetics , Receptors, Nicotinic/metabolism , alpha7 Nicotinic Acetylcholine Receptor/metabolism
4.
Turk J Gastroenterol ; 30(2): 198-207, 2019 02.
Article in English | MEDLINE | ID: mdl-30541713

ABSTRACT

BACKGROUND/AIMS: Aberrant activation of the Wnt/ß-catenin signaling, which arises from the accumulation of mutant ß-catenin in the cell, is one of the most common driving forces in hepatocellular carcinoma (HCC). We previously identified several genes that are regulated on the overexpression of ß-catenin in the HCC cell line that are suggested to be novel Wnt/ß-catenin targets playing effective roles in cancer. The aim of the present study was to elucidate the roles of these putative target genes in tumorigenesis with an in vivo analysis in Drosophila. MATERIALS AND METHODS: We selected 15 genes downregulated in two Drosophila cancer models. RESULTS: The results from the RNAi mini-screen revealed novel roles for the analyzed putative Wnt/ß-catenin target genes in tumorigenesis. The downregulation of the analyzed nine genes led to tumor formation as well as metastasis in Drosophila, suggesting a tumor suppressor function. On the other hand, the knockdown of the other two genes suppressed tumor and metastasis formations and disturbed the development of the analyzed eye tissues, indicating an oncogenic or developmental role for these genes. CONCLUSION: These findings could serve to identify novel subjects for cancer research in order to provide insight into the diagnostic and therapeutic processes of several cancer types.


Subject(s)
Carcinoma, Hepatocellular/genetics , Liver Neoplasms/genetics , RNA Interference/physiology , Wnt Signaling Pathway/genetics , Animals , Carcinogenesis/genetics , Disease Models, Animal , Down-Regulation , Drosophila , beta Catenin/metabolism
5.
Turk Neurosurg ; 18(4): 327-35, 2008 Oct.
Article in English | MEDLINE | ID: mdl-19107678

ABSTRACT

AIM: Hyperpolarization-activated cyclic nucleotide-gated (HCN or h-channel) channels mediate hyperpolarization-activating currents in the hippocampus and neocortex. The aim of this study is to present prenatal h-channel gene expressions (HCN1 and HCN2; HCN1-Entrez-Gene ID: 84390; HCN2- Entrez Gene ID: 114244) in dysplastic hippocampal pyramidal neurons induced by in utero irradiation in rats. MATERIALS AND METHODS: Time-pregnant Wistar albino rats were irradiated and the dysplastic hippocampus in their 2 month-old litters was studied. Gene expression was studied by RNA extraction and polymerase chain reaction methods. RESULTS: None of the rats showed seizure activity. mRNA levels of HCN1 and HCN2 genes were decreased especially in the CA1 and CA3 pyramidal neurons in the hippocampi of experimental rats; however, the differences were not significant compared to controls. In CA2, mRNA levels of both genes were increased and this rise did not reach significant level. The CA4 sub-region showed a different pattern of expression: HCN1 increased but HCN2 decreased insignificantly compared to controls. CONCLUSION: Our results demonstrated that dysplastic neurons showed decreased levels of mRNA expression of HCN1 and HCN2 genes, in particularly CA1 and CA3 pyramidal neurons. The rationale for how these changes contribute to epileptogenesis in dysplastic tissues still requires further studies.


Subject(s)
Cyclic Nucleotide-Gated Cation Channels/genetics , Hippocampus/abnormalities , Hippocampus/metabolism , Potassium Channels/genetics , Animals , Brain/pathology , Cyclic Nucleotide-Gated Cation Channels/biosynthesis , DNA, Complementary/biosynthesis , DNA, Complementary/genetics , Female , Hippocampus/growth & development , Hyperpolarization-Activated Cyclic Nucleotide-Gated Channels , Potassium Channels/biosynthesis , Pregnancy , Pyramidal Cells/metabolism , RNA/biosynthesis , RNA/genetics , Radiation Injuries, Experimental/genetics , Radiation Injuries, Experimental/metabolism , Rats , Rats, Wistar , Reverse Transcriptase Polymerase Chain Reaction
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