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1.
Mem Inst Oswaldo Cruz ; 116: e200326, 2021.
Article in English | MEDLINE | ID: mdl-34008737

ABSTRACT

BACKGROUND: Schistosomiasis is a disease caused by Schistosoma. Due to its complex life cycle, evolutionary position and sexual dimorphism, schistosomes have several mechanisms of gene regulation. MicroRNAs (miRNAs) are short endogenous RNAs that regulate gene expression at the post-transcriptional level by targeting mRNA transcripts. OBJECTIVES: Here, we tested 12 miRNAs and identified their putative targets using a computational approach. METHODS: We performed the expression profiles of a set of miRNAs and their putative targets during the parasite's life cycle by quantitative reverse transcription-polymerase chain reaction (qRT-PCR). FINDINGS: Our results showed differential expression patterns of the mature miRNAs sma-miR-250; sma-miR-92a; sma-miR-new_4-3p; sma-miR-new_4-5p; sma-miR-new_5-5p; sma-miR-new_12-5p; sma-miR-new_13-3p and sma-miR-new_13-5p. Interestingly, many of the putative target genes are linked to oxidative phosphorylation and are up-regulated in adult-worms, which led us to suggest that miRNAs might play important roles in the post-transcriptional regulation of genes related to energetic metabolism inversion during parasite development. It is noteworthy that the expression of sma-miR-new_13-3p exhibited a negative correlation on SmNADH:ubiquinone oxidoreductase complex I. MAIN CONCLUSIONS: Our analysis revealed putative miRNA genes related to important biological processes, such as transforming growth factor beta (TGF-ß) signaling, proteasome regulation, glucose and lipid metabolism, immune system evasion and transcriptional regulation.


Subject(s)
MicroRNAs , Animals , Gene Expression Profiling , Gene Expression Regulation/genetics , Life Cycle Stages/genetics , MicroRNAs/genetics , Schistosoma mansoni/genetics , Signal Transduction
2.
Mem. Inst. Oswaldo Cruz ; 116: e200326, 2021. tab, graf
Article in English | LILACS | ID: biblio-1250363

ABSTRACT

BACKGROUND Schistosomiasis is a disease caused by Schistosoma. Due to its complex life cycle, evolutionary position and sexual dimorphism, schistosomes have several mechanisms of gene regulation. MicroRNAs (miRNAs) are short endogenous RNAs that regulate gene expression at the post-transcriptional level by targeting mRNA transcripts. OBJECTIVES Here, we tested 12 miRNAs and identified their putative targets using a computational approach. METHODS We performed the expression profiles of a set of miRNAs and their putative targets during the parasite's life cycle by quantitative reverse transcription-polymerase chain reaction (qRT-PCR). FINDINGS Our results showed differential expression patterns of the mature miRNAs sma-miR-250; sma-miR-92a; sma-miR-new_4-3p; sma-miR-new_4-5p; sma-miR-new_5-5p; sma-miR-new_12-5p; sma-miR-new_13-3p and sma-miR-new_13-5p. Interestingly, many of the putative target genes are linked to oxidative phosphorylation and are up-regulated in adult-worms, which led us to suggest that miRNAs might play important roles in the post-transcriptional regulation of genes related to energetic metabolism inversion during parasite development. It is noteworthy that the expression of sma-miR-new_13-3p exhibited a negative correlation on SmNADH:ubiquinone oxidoreductase complex I. MAIN CONCLUSIONS Our analysis revealed putative miRNA genes related to important biological processes, such as transforming growth factor beta (TGF-β) signaling, proteasome regulation, glucose and lipid metabolism, immune system evasion and transcriptional regulation.


Subject(s)
Animals , MicroRNAs/genetics , Schistosoma mansoni/genetics , Signal Transduction , Gene Expression Regulation/genetics , Gene Expression Profiling , Life Cycle Stages/genetics
3.
Biomed Res Int ; 2018: 1264697, 2018.
Article in English | MEDLINE | ID: mdl-30112357

ABSTRACT

Long noncoding RNAs (lncRNAs) are transcripts generally longer than 200 nucleotides with no or poor protein coding potential, and most of their functions are also poorly characterized. Recently, an increasing number of studies have shown that lncRNAs can be involved in various critical biological processes such as organism development or cancer progression. Little, however, is known about their effects in helminths parasites, such as Schistosoma mansoni. Here, we present a computational pipeline to identify and characterize lncRNAs from RNA-seq data with high confidence from S. mansoni adult worms. Through the utilization of different criteria such as genome localization, exon number, gene length, and stability, we identified 170 new putative lncRNAs. All novel S. mansoni lncRNAs have no conserved synteny including human and mouse. These closest protein coding genes were enriched in 10 significant Gene Ontology terms related to metabolism, transport, and biosynthesis. Fifteen putative lncRNAs showed differential expression, and three displayed sex-specific differential expressions in praziquantel sensitive and resistant adult worm couples. Together, our method can predict a set of novel lncRNAs from the RNA-seq data. Some lncRNAs are shown to be differentially expressed suggesting that those novel lncRNAs can be given high priority in further functional studies focused on praziquantel resistance.


Subject(s)
Gene Ontology , RNA, Long Noncoding , Schistosoma mansoni/genetics , Animals , Exons , Female , Gene Expression Profiling , Genome , Humans , Male , Mice
4.
Parasit Vectors ; 8: 349, 2015 Jun 26.
Article in English | MEDLINE | ID: mdl-26112833

ABSTRACT

BACKGROUND: The ubiquitination process can be reversed by deubiquitinating enzymes (DUBs). These proteases are involved in ubiquitin processing, in the recovery of modified ubiquitin trapped in inactive forms, and in the recycling of ubiquitin monomers from polyubiquitinated chains. The diversity of DUB functions is illustrated by their number and variety of their catalytic domains with specific 3D architectures. DUBs can be divided into five subclasses: ubiquitin C-terminal hydrolases (UCHs), ubiquitin-specific proteases (USPs or UBPs), ovarian tumour proteases (OTUs), Machado-Joseph disease proteases (MJDs) and JAB1/MPN/Mov34 metalloenzymes (JAMMs). METHODS: Considering the role that the ubiquitin-proteasome system has been shown to play during the development of Schistosoma mansoni, our main goal was to identify and characterize SmUSPs. Here, we showed the identification of putative ubiquitin-specific proteases using bioinformatic approaches. We also evaluated the gene expression profile of representative USP family members using qRT-PCR. RESULTS: We reported 17 USP family members in S. mansoni that present a conservation of UCH domains. Furthermore, the putative SmUSP transcripts analysed were detected in all investigated stages, showing distinct expression during S. mansoni development. The SmUSPs exhibiting high expression profiles were SmUSP7, SmUSP8, SmUSP9x and SmUSP24. CONCLUSION: S. mansoni USPs showed changes in expression levels for different life cycle stages indicating their involvement in cellular processes required for S. mansoni development. These data will serve as a basis for future functional studies of USPs in this parasite.


Subject(s)
Helminth Proteins/genetics , Schistosoma mansoni/enzymology , Schistosoma mansoni/growth & development , Ubiquitin-Specific Proteases/genetics , Amino Acid Sequence , Animals , Gene Expression Regulation, Developmental , Gene Expression Regulation, Enzymologic , Helminth Proteins/chemistry , Helminth Proteins/metabolism , Life Cycle Stages , Molecular Sequence Data , Multigene Family , Phylogeny , Schistosoma mansoni/chemistry , Schistosoma mansoni/genetics , Sequence Alignment , Ubiquitin-Specific Proteases/chemistry , Ubiquitin-Specific Proteases/metabolism
5.
Parasitol Res ; 114(5): 1769-77, 2015 May.
Article in English | MEDLINE | ID: mdl-25663106

ABSTRACT

Ubiquitin-conjugating enzymes (Ub-E2) perform the second step of ubiquitination and, consequently, are essential for regulating proteolysis and for modulating protein function, interactions and trafficking. Previously, our group demonstrated the crucial role of ubiquitination and the Ub-proteasome pathway during the Schistosoma mansoni life cycle. In the present investigation, we used a homology-based genome-wide bioinformatics approach to identify and molecularly characterise the Ub-E2 enzymes in S. mansoni. The putative functions were further investigated through molecular phylogenetic and expression profile analyses using cercariae, adult worms, eggs and mechanically transformed schistosomula (MTS) cultured in vitro for 3.5 h or 1 or 3 days. We identified, via in silico analysis, 17 Ub-E2 enzymes with conserved structural characteristics: the beta-sheet and the helix-2 form a central core bordered by helix-1 at one side and helix-3 and helix-4 at the other. The observed quantitative differences in the steady-state transcript levels between the cercariae and adult worms may contribute to the differential protein ubiquitination observed during the parasite's life cycle. This study is the first to identify and characterise the E2 ubiquitin conjugation family in S. mansoni and provides fundamental information regarding their molecular phylogenetics and developmental expression during intra-mammalian stages.


Subject(s)
Gene Expression Regulation, Enzymologic/physiology , Helminth Proteins/metabolism , Schistosoma mansoni/metabolism , Ubiquitin-Conjugating Enzymes/metabolism , Animals , Cercaria/genetics , Gene Expression Regulation, Developmental , Helminth Proteins/genetics , Life Cycle Stages/physiology , Phylogeny , Proteasome Endopeptidase Complex/genetics , Schistosoma mansoni/genetics , Ubiquitin/metabolism , Ubiquitin-Conjugating Enzymes/genetics , Ubiquitination
6.
Parasitol Res ; 113(6): 2019-25, 2014 Jun.
Article in English | MEDLINE | ID: mdl-24802862

ABSTRACT

Small ubiquitin-like modifier (SUMO) conjugation of proteins occurs through a concert action of enzymes using a similar ubiquitination mechanism. After a C-terminal peptide is cleaved from the SUMO precursor by a protease to reveal a di-glycine motif, SUMO is activated by an E1 enzyme (Aos1/Uba2) and conjugated to target proteins by the sole E2 enzyme (Ubc9) guided to the appropriate substrates by the SUMO E3 ligase. Previous reports from our group showed that Schistosoma mansoni has two paralogs of SUMO: one E2 conjugation Ubc9 and two SUMO-specific proteases (SENPs). The differential gene expression profile observed for SUMO pathway genes throughout the S. mansoni life cycle attests for the distinct patterns of SUMO conjugates observed during parasite development particularly during the cercariae to schistosomula transition. To continue this investigation, we here analysed the repertoire of SUMO E3 ligases and their expression profiles during cercariae/schistosomula transition. In silico analysis through S. mansoni databases showed two conserved SUMO E3 ligases: protein inhibitor of activated STAT (PIAS) and Ran-binding protein 2 (RanBP2). Furthermore, expression levels of the SUMO E3 ligases were measured by qRT-PCR using total RNA from cercariae, adult worms and mechanically transformed schistosomula. Our data showed an up-regulation of expression in lung schistosomula and adult worm stages. In conclusion, the differential expression of SmPIAS and SmRanBP2 during schistosomula development was similar to the expression levels of all genes related to SUMO conjugation, thereby suggesting that the control of protein activity, localisation or stability during cercariae to schistosomula transition is SUMO-dependent.


Subject(s)
Lung Diseases, Parasitic/enzymology , Schistosoma mansoni/metabolism , Schistosomiasis mansoni/enzymology , Ubiquitin-Conjugating Enzymes/metabolism , Animals , Computational Biology , Gene Expression Regulation, Enzymologic/physiology , Lung Diseases, Parasitic/metabolism , Lung Diseases, Parasitic/pathology , Mice , Schistosoma mansoni/genetics , Schistosomiasis mansoni/metabolism , Schistosomiasis mansoni/pathology , Transcriptional Activation , Transcriptome , Ubiquitin-Conjugating Enzymes/genetics , Up-Regulation
7.
Parasitol Int ; 63(1): 120-6, 2014 Feb.
Article in English | MEDLINE | ID: mdl-24148287

ABSTRACT

Vaults are ribonucleoproteins (13 MDa) highly conserved among lower and higher eukaryotes. Their association produces a complex composed of three proteins named Major Vault Protein (MVP), vault (PolyADP-ribose) polymerase (VPARP) and Telomerase-associated protein (TEP1), plus a small untranslated RNA. The exact function of this complex is unknown, although the biological role of vaults has been associated with multidrug resistance phenotypes and signal transduction pathways. Genomic analysis showed that model organisms, such as Caenorhabditis elegans and Drosophila melanogaster, do not possess genes encoding vaults. However, we have found that vault-related genes are present in the Schistosoma mansoni genome. These observations raised questions on the involvement of vaults in mechanisms of adaptation of the parasite in its mammalian host. Therefore, molecular characterisation of the putative Major Vault Protein performed using bioinformatics tools showed that this vault component is highly conserved in S. mansoni. The MVP expression level was quantified by qRT-PCR using total RNA from susceptible (LE) and resistant (LE-PZQ) adult worm lineages, cercariae and mechanically transformed schistosomula (MTS) cultured for 3.5, 24, 48 and 72 h in vitro. Our results suggest a stage-specific expression in all developmental stages analysed. Western blotting has shown up-regulation of SmMVP in the MTS-3.5, 72 h and resistant adult worms, and similar levels in all other stages. Furthermore, SmMVP was found differentially expressed in adult males and females from the susceptible lineage. Further studies should clarify whether SmMVP is somehow linked to drug resistance in S. mansoni.


Subject(s)
Gene Expression Regulation, Developmental/physiology , Life Cycle Stages/physiology , Schistosoma mansoni/physiology , Vault Ribonucleoprotein Particles/metabolism , Animals , Anthelmintics/pharmacology , Databases, Factual , Drug Resistance , Female , Humans , Male , Praziquantel/pharmacology , RNA, Messenger/genetics , RNA, Messenger/metabolism , Schistosoma mansoni/drug effects , Vault Ribonucleoprotein Particles/genetics
8.
Parasitol Res ; 112(12): 4151-9, 2013 Dec.
Article in English | MEDLINE | ID: mdl-24013345

ABSTRACT

Several proteins and different species of RNA that are produced in the nucleus are exported through the nuclear pore complexes, which require a family of conserved nuclear export receptors called exportins (XPOs). It has been reported that the XPOs (XPO1, XPO5, and XPOT) are directly involved in the transport processes of noncoding RNAs from the nucleus to the cytoplasm and/or from cytoplasm to the nucleus. All three genes are present in fungi, plants, and deuterostome metazoans. However, protostome metazoan species lack one of the three genes across evolution. In this report, we have demonstrated that all three XPO proteins are present in the parasite protostome Schistosoma mansoni. As this parasite has a complex life cycle presenting several stages in different hosts and environments, implying a differential gene regulation, we proposed a genomic analysis of XPOs to validate their annotation. The results showed the conservation of exportin family members and gene duplication events in S. mansoni. We performed quantitative RT-PCR, which revealed an upregulation of SmXPO1 in 24 h schistosomula (sixfold when compared with cercariae), and similar transcription levels were observed for SmXPO5 and SmXPOT in all the analyzed stages. These three XPO proteins have been identified for the first time in the protostome clade, which suggests a higher complexity in RNA transport in the parasite S. mansoni. Taken together, these results suggest that RNA transport by exportins might control cellular processes during cercariae, schistosomula, and adult worm development.


Subject(s)
Helminth Proteins/metabolism , Karyopherins/metabolism , Schistosoma mansoni/genetics , Animals , Biological Evolution , Conserved Sequence , Gene Duplication , Helminth Proteins/genetics , Karyopherins/genetics , Schistosoma mansoni/metabolism , Transcriptome
9.
Parasitol Res ; 112(6): 2245-53, 2013 Jun.
Article in English | MEDLINE | ID: mdl-23519425

ABSTRACT

The COP9 signalosome (CSN) is an eight-subunit complex found in all eukaryotes and shares structural features with both the 26S proteasome 'lid' and translation factor eIF3. Recent data have demonstrated that the CSN is a regulator of the ubiquitin (Ub) proteasome system (UPS). CSN controls substrate ubiquitination by cullin-RING Ub ligases, a step which determines substrate specificity of the UPS. Here, we reconstructed the CSN complex in Schistosoma mansoni and identified eight homologous components. Among these homologues, five subunits were predicted with their full-length sequences. Phylogenetic analysis confirmed the evolutionary conservation and the architecture of CSN, as well as the 26S proteasome 'lid'. We performed quantitative reverse transcription-polymerase chain reaction to detect the expression of the SmCSN transcripts. The Smcsn1, Smcsn2, Smcsn3, Smcsn4, Smcsn5, Smcsn6, Smcsn7 and Smcsn8 genes were up-regulated in adult worms compared to cercariae, and the expression levels were similar to that of in vitro cultivated schistosomula. Taken together, these results suggest that the CSN complex may be important during cercariae, schistosome and adult worm development and might explain, at least in part, the differences among UPSs during the parasite life cycle.


Subject(s)
Helminth Proteins/genetics , Multiprotein Complexes/genetics , Peptide Hydrolases/genetics , Schistosoma mansoni/genetics , Animals , COP9 Signalosome Complex , Conserved Sequence , Gene Expression Profiling , Phylogeny , Real-Time Polymerase Chain Reaction , Schistosoma mansoni/growth & development , Sequence Homology, Amino Acid
10.
Parasitol Int ; 62(2): 199-207, 2013 Apr.
Article in English | MEDLINE | ID: mdl-23313772

ABSTRACT

NEDD8 is an ubiquitin-like molecule that covalently binds to target proteins through an enzymatic cascade analogous to ubiquitylation. This modifier is known to bind to p53 and p73, as well as all Cullin family proteins, which are essential components of Skp1/Cul-1/F-box protein (SCF)-like Ub ligase complexes. Here, we focused on a genomic analysis of the genes involved in the NEDD8 conjugation pathway in Schistosoma mansoni. The results revealed seven genes related to NEDD8 conjugation that are conserved in Schistosoma japonicum, Caenorhabditis elegans, Drosophila melanogaster and Homo sapiens. We performed quantitative RT-PCR (qRT-PCR), which showed differential profiles for Smnedd8, Smapp1, Smuba3, Smube2f, Smdcn1, Smrbx and Smsenp8 throughout the life cycle of S. mansoni. Upregulation was observed in 3-day-old schistosomula and adult worms for all analysed genes. We also analysed the transcription levels of Cullin family members Smp63 and Smp73, and observed upregulation in early schistosomula, while cercariae and adult worms showed expression levels similar to one another. Taken together, these results suggest that the NEDDylation/DeNEDDylation pathway controls important cellular regulators during worm development from cercariae to schistosomula and, finally, to adult.


Subject(s)
Cullin Proteins/metabolism , Protein Processing, Post-Translational , Schistosoma mansoni/metabolism , Ubiquitin-Conjugating Enzymes/genetics , Ubiquitins/genetics , Amino Acid Sequence , Animals , Biomphalaria , Cullin Proteins/genetics , Gene Expression Regulation , Genomics , Helminth Proteins/genetics , Helminth Proteins/metabolism , Mice , Mice, Inbred BALB C , Molecular Sequence Data , Phylogeny , Protein Structure, Tertiary , RNA, Helminth/genetics , Schistosoma mansoni/enzymology , Schistosoma mansoni/genetics , Schistosoma mansoni/growth & development , Schistosomiasis mansoni/parasitology , Sequence Alignment , Transcriptome , Ubiquitin-Conjugating Enzymes/metabolism , Ubiquitin-Protein Ligase Complexes/genetics , Ubiquitin-Protein Ligase Complexes/metabolism , Ubiquitins/metabolism
11.
Mem Inst Oswaldo Cruz ; 106(2): 153-7, 2011 Mar.
Article in English | MEDLINE | ID: mdl-21537673

ABSTRACT

To elucidate the mechanisms of antischistosoma resistance, drug-resistant Schistosoma mansoni laboratory isolates are essential. We developed a new method for inducing resistance to praziquantel (PZQ) using successive drug treatments of Biomphalaria glabrata snails infected with S. mansoni. Infected B. glabrata were treated three times with 100 mg/kg PZQ for five consecutive days with a one-week interval between them. After the treatment, the cercariae (LE-PZQ) produced from these snails and the LE strains (susceptible) were used to infect mice. Forty-five days after infection, mice were treated with 200, 400 or 800 mg/kg PZQ. Thirty days post-treatment, we observed that the mean number of worms recovered by perfusion was significantly higher in the group of mice infected with the LE-PZQ isolate treated with 200 and 400 mg/kg in comparison to the LE strain with the same treatment. Moreover, there was a significant difference between the ED50 (effective dose required to kill 50% of the worms) of the LE-PZQ isolate (362 mg/kg) and the LE strain (68 mg/kg). In the in vitro assays, the worms of the LE-PZQ isolate were also less susceptible to PZQ. Thus, the use of infected snails as an experimental model for development of resistance to S. mansoni is effective, fast, simple and cheap.


Subject(s)
Anthelmintics/pharmacology , Biomphalaria/parasitology , Drug Resistance/drug effects , Praziquantel/pharmacology , Schistosoma mansoni/drug effects , Animals , Dose-Response Relationship, Drug , Mice , Parasitic Sensitivity Tests
12.
Parasitol Res ; 109(6): 1537-46, 2011 Dec.
Article in English | MEDLINE | ID: mdl-21573813

ABSTRACT

SUMO-dependent post-translational modification is implicated in a variety of cellular functions including gene expression regulation, nuclear sub-localization, and signal transduction. Conjugation of SUMO to other proteins occurs in a similar process to ubiquitination, which involves three classes of enzymes: an E1 activating, an E2 conjugating, and an E3 target-specific ligase. Ubc9 is the unique SUMO E2 enzyme known to conjugate SUMO to target substrates. Here, we present the molecular characterization of this enzyme and demonstrate its expression profile during the S. mansoni life cycle. We have used bioinformatic approaches to identify the SUMO-conjugating enzyme, the SmUbc9-like protein, in the Schistosoma mansoni databases. Quantitative RT-PCR was employed to measure the transcript levels of SUMO E2 in cercariae, adult worms, and in vitro cultivated schistosomula. Furthermore, recombinant SmUbc9 was expressed using the Gateway system, and antibodies raised in rats were used to measure SmUbc9 protein levels in S. mansoni stages by Western blotting. Our data revealed upregulation of the SmUbc9 transcript in early schistosomula followed by a marked differential gene expression in the other analyzed stages. The protein levels were maintained fairly constant suggesting a post-transcriptional regulation of the SmUbc9 mRNA. Our results show for the first time that S. mansoni employs a functional SUMO E2 enzyme, for the conjugation of the SUMO proteins to its target substrates.


Subject(s)
Schistosoma mansoni/enzymology , Schistosoma mansoni/genetics , Small Ubiquitin-Related Modifier Proteins/metabolism , Ubiquitin-Conjugating Enzymes/genetics , Amino Acid Sequence , Animals , Gene Expression Profiling , Gene Expression Regulation, Enzymologic , Mice , Mice, Inbred BALB C , Molecular Sequence Data , Recombinant Proteins/chemistry , Recombinant Proteins/metabolism , Schistosoma mansoni/metabolism , Sequence Alignment , Snails/parasitology , Sumoylation , Ubiquitin-Conjugating Enzymes/chemistry , Ubiquitin-Conjugating Enzymes/metabolism
13.
Mem. Inst. Oswaldo Cruz ; 106(2): 153-157, Mar. 2011. ilus, graf, tab
Article in English | LILACS | ID: lil-583938

ABSTRACT

To elucidate the mechanisms of antischistosoma resistance, drug-resistant Schistosoma mansoni laboratory isolates are essential. We developed a new method for inducing resistance to praziquantel (PZQ) using successive drug treatments of Biomphalaria glabrata snails infected with S. mansoni. Infected B. glabrata were treated three times with 100 mg/kg PZQ for five consecutive days with a one-week interval between them. After the treatment, the cercariae (LE-PZQ) produced from these snails and the LE strains (susceptible) were used to infect mice. Forty-five days after infection, mice were treated with 200, 400 or 800 mg/kg PZQ. Thirty days post-treatment, we observed that the mean number of worms recovered by perfusion was significantly higher in the group of mice infected with the LE-PZQ isolate treated with 200 and 400 mg/kg in comparison to the LE strain with the same treatment. Moreover, there was a significant difference between the ED50 (effective dose required to kill 50 percent of the worms) of the LE-PZQ isolate (362 mg/kg) and the LE strain (68 mg/kg). In the in vitro assays, the worms of the LE-PZQ isolate were also less susceptible to PZQ. Thus, the use of infected snails as an experimental model for development of resistance to S. mansoni is effective, fast, simple and cheap.


Subject(s)
Animals , Mice , Anthelmintics , Biomphalaria , Drug Resistance , Praziquantel , Schistosoma mansoni , Dose-Response Relationship, Drug , Parasitic Sensitivity Tests
14.
Mem Inst Oswaldo Cruz ; 105(4): 504-11, 2010 Jul.
Article in English | MEDLINE | ID: mdl-20721500

ABSTRACT

Mitochondrial DNA of Biomphalaria tenagophila, a mollusc intermediate host of Schistosoma mansoni in Brazil, was sequenced and characterised. The genome size found for B. tenagophila was 13,722 bp and contained 13 messenger RNAs, 22 transfer RNAs (tRNA) and two ribosomal RNAs (rRNA). In addition to sequencing, the mitochondrial DNA (mtDNA) genome organization of B. tenagophila was analysed based on its content and localization of both coding and non-coding regions, regions of gene overlap and tRNA nucleotide sequences. Sequences of protein, rRNA 12S and rRNA 16S nucleotides as well as gene organization were compared between B. tenagophila and Biomphalaria glabrata, as the latter is the most important S. mansoni intermediate host in Brazil. Differences between such species were observed regarding rRNA composition. The complete sequence of the B. tenagophila mitochondrial genome was deposited in GenBank (accession EF433576). Furthermore, phylogenetic relationships were estimated among 28 mollusc species, which had their complete mitochondrial genome deposited in GenBank, using the neighbour-joining method, maximum parsimony and maximum likelihood bootstrap. B. tenagophila was positioned at a branch close to B. glabrata and Pulmonata molluscs, collectively comprising a paraphyletic group, contrary to Opistobranchia, which was positioned at a single branch and constituted a monophyletic group.


Subject(s)
Biomphalaria/genetics , DNA, Mitochondrial/genetics , RNA, Ribosomal/genetics , RNA, Transfer/genetics , Animals , Base Sequence , Molecular Sequence Data , Phylogeny , Polymerase Chain Reaction , RNA, Ribosomal, 16S/genetics
15.
Mem. Inst. Oswaldo Cruz ; 105(4): 504-511, July 2010. tab, ilus
Article in English | LILACS | ID: lil-554822

ABSTRACT

Mitochondrial DNA of Biomphalaria tenagophila, a mollusc intermediate host of Schistosoma mansoni in Brazil, was sequenced and characterised. The genome size found for B. tenagophila was 13,722 bp and contained 13 messenger RNAs, 22 transfer RNAs (tRNA) and two ribosomal RNAs (rRNA). In addition to sequencing, the mitochondrial DNA (mtDNA) genome organization of B. tenagophila was analysed based on its content and localization of both coding and non-coding regions, regions of gene overlap and tRNA nucleotide sequences. Sequences of protein, rRNA 12S and rRNA 16S nucleotides as well as gene organization were compared between B. tenagophila and Biomphalaria glabrata, as the latter is the most important S. mansoni intermediate host in Brazil. Differences between such species were observed regarding rRNA composition. The complete sequence of the B. tenagophila mitochondrial genome was deposited in GenBank (accession EF433576). Furthermore, phylogenetic relationships were estimated among 28 mollusc species, which had their complete mitochondrial genome deposited in GenBank, using the neighbour-joining method, maximum parsimony and maximum likelihood bootstrap. B. tenagophila was positioned at a branch close to B. glabrata and Pulmonata molluscs, collectively comprising a paraphyletic group, contrary to Opistobranchia, which was positioned at a single branch and constituted a monophyletic group.


Subject(s)
Animals , Biomphalaria , DNA, Mitochondrial , RNA, Ribosomal , RNA, Transfer , Base Sequence , Molecular Sequence Data , Phylogeny , Polymerase Chain Reaction
16.
Acta Trop ; 111(1): 1-6, 2009 Jul.
Article in English | MEDLINE | ID: mdl-19426656

ABSTRACT

The three vector species of Schistosoma mansoni in Brazil, Biomphalaria glabrata, B. tenagophila and B. straminea show different susceptibility levels to the trematode besides a wide geographical distribution. The identification of such molluscs is important to further understand the disease epidemiology. Considering the fact that morphological identification may become difficult or even impossible under particular circumstances, the use of molecular-based methods have permitted the generation of more consistent information concerning the population structure of Biomphalaria furthering knowledge on taxonomy and diagnosis of infection. We have developed methodologies in order to provide simultaneous species identification of the intermediate host and diagnosis of infection with S. mansoni.


Subject(s)
Biomphalaria/classification , Biomphalaria/parasitology , Schistosoma mansoni/isolation & purification , Schistosomiasis mansoni/veterinary , Animals , Brazil , DNA Fingerprinting , DNA, Helminth/genetics , DNA, Ribosomal/genetics , DNA, Ribosomal Spacer/genetics , Genotype , Molecular Epidemiology , Polymorphism, Restriction Fragment Length , Schistosoma mansoni/genetics , Schistosomiasis mansoni/parasitology
17.
Parasitol Int ; 58(1): 61-8, 2009 Mar.
Article in English | MEDLINE | ID: mdl-19007911

ABSTRACT

RNA silencing refers to a series of nuclear and cytoplasmatic processes involved in the post-transcriptional regulation of gene expression or post-transcriptional gene silencing (PTGS), either by sequence-specific mRNA degradation or by translational arrest. The best characterized small RNAs are microRNAs (miRNAs), which predominantly perform gene silencing through post-transcriptional mechanisms. In this work we used bioinformatic approaches to identify the parasitic trematode Schistosoma mansoni sequences that are similar to enzymes involved in the post-transcriptional gene silencing mediated by miRNA pathway. We used amino acid sequences of well-known proteins involved in the miRNA pathway against S. mansoni genome and transcriptome databases identifying a total of 13 putative proteins in the parasite. In addition, the transcript levels of SmDicer1 and SmAgo2/3/4 were identified by qRT-PCR using cercariae, adult worms, eggs and in vitro cultivated schistosomula. Our results showed that the SmDicer1 and SmAgo2/3/4 are differentially expressed during schistosomula development, suggesting that the miRNA pathway is regulated at the transcript level and therefore may control gene expression during the life cycle of S. mansoni.


Subject(s)
Computational Biology/methods , Gene Expression Regulation , Helminth Proteins , MicroRNAs/metabolism , RNA Interference , Schistosoma mansoni/growth & development , Schistosoma mansoni/metabolism , Amino Acid Sequence , Animals , Genes, Helminth , Helminth Proteins/chemistry , Helminth Proteins/genetics , Helminth Proteins/metabolism , Life Cycle Stages , Mice , Mice, Inbred BALB C , MicroRNAs/chemistry , MicroRNAs/genetics , Molecular Sequence Data , Phylogeny , RNA-Binding Proteins/chemistry , RNA-Binding Proteins/genetics , RNA-Binding Proteins/metabolism , Reverse Transcriptase Polymerase Chain Reaction , Ribonuclease III/chemistry , Ribonuclease III/genetics , Ribonuclease III/metabolism , Schistosoma mansoni/genetics , Sequence Alignment
18.
Acta Trop ; 108(2-3): 245-8, 2008.
Article in English | MEDLINE | ID: mdl-18598664

ABSTRACT

Biomphalaria tenagophila Taim lineage has proved to be consistently resistant to Schistosoma mansoni. Several published works have shown that this resistance is due to the innate defence system of that strain, and in cross-breedings with susceptible strains the Taim lineage presents dominant character. These findings led to the hypothesis that, introducing this strain in areas where transmission of schistosomiasis is maintained by this species, the introduced lineage would perform cross-breeding with the local snails, thus generating offsprings resistant to the parasites. The perspectives of the proposed approach, as well as some preliminary results and problems related to the first introduction without a previous use of molluscicide are discussed.


Subject(s)
Biomphalaria/parasitology , Communicable Disease Control/methods , Disease Transmission, Infectious/prevention & control , Immunity, Innate , Schistosomiasis mansoni/epidemiology , Schistosomiasis mansoni/prevention & control , Animals , Humans , Schistosomiasis mansoni/transmission
19.
Vet Parasitol ; 152(3-4): 333-8, 2008 Apr 15.
Article in English | MEDLINE | ID: mdl-18243563

ABSTRACT

Detection of Fasciola hepatica infection in Lymnaea viatrix through analysis of histological cuts is based upon morphological characters of the parasite during the intra-mollusk phase of parasitism. At this stage, trematode forms are very similar and, thus, very difficult to differentiate. Specific detection may also be impaired by the presence of other helminthes in the mollusk. Histological samples are usually fixed in formalin, embedded in paraffin, sectioned and HE stained. In the current study, a method for the extraction of DNA from formalin-fixed, paraffin-embedded tissues was standardized by means of deparaffinizing with xylol and digesting with proteinase K. Extracted DNA was amplified in a multiplex-PCR, by using simultaneous primers in a single reaction under high stringency conditions. Results showed specific amplification of DNA from the trematode and the snails. The technique was sensitive enough to detect F. hepatica infections in L. viatrix, in histological sections in which the presence of larval stages could not be observed through brightfield microscopy. The profiles generated were: stair bands referring to F. hepatica DNAmt amplification; a band of 1200 bp referring to L. viatrix ITS and another of 1300 bp referring to F. hepatica ITS and other trematodes. Multiplex-PCR has shown to be a fast, safe, highly sensitive and specific method, which is able to amplify DNA from fixed tissues, despite a low DNA quantity and its degradation caused by fixation processes. Such methodology may be useful in studies on fascioliasis epidemiology, enabling the use of material from histological collections.


Subject(s)
DNA, Helminth/analysis , Fasciola hepatica/isolation & purification , Lymnaea/parasitology , Polymerase Chain Reaction/veterinary , Animals , DNA Primers , Disease Reservoirs/parasitology , Disease Reservoirs/veterinary , Disease Vectors , Fasciola hepatica/genetics , Gene Amplification , Polymerase Chain Reaction/methods , Sensitivity and Specificity , Species Specificity
20.
Acta Trop ; 105(3): 229-34, 2008 Mar.
Article in English | MEDLINE | ID: mdl-18262165

ABSTRACT

For a better comprehension of the parasite-host interaction, proteins expressed by the cardiac and pericardial tissues were compared between susceptible (Cabo Frio) and resistant (Taim) Biomphalaria tenagophila populations, challenged (c) and non-challenged (nc) with Schistosoma mansoni. Proteins were separated by two-dimensional gel electrophoresis (2DE) and stained with Coomassie blue. A total of 146 and 135 spots were observed in Cabo Frio (CFnc) and in Taim (Tnc) non-challenged populations, respectively, whereas 153 spots were detected in both Cabo Frio (CFc) and Taim (Tc) challenged populations. Regarding comparisons between CFnc and CFc, the numbers of exclusive spots obtained were one and nine, respectively, whereas Tnc yielded 17 and Tc eight exclusive spots. By comparing the total of spots in CF (nc+c) with T (nc+c) populations, we obtained: four exclusive spots for CFc; zero for CFnc; four for Tc and; one for Tnc. A quantitative comparison (reason>2.5) of the total spots of CF (nc+c) with T (nc+c) populations allowed us to distinguish five more intense spots for Tc, 14 for Tnc, 15 for CFnc and 11 for CFc. In the CFnc population, two proteins were identified: actin and ATP synthase alpha chain; in the CFc population, four proteins: actin, calmodulin, HSP70, and dehydrogenase; in the Tnc population, five proteins: matrilin, HSP70, actin, ATP synthase alpha chain and intermediate filament of the protein; and in the Tc population, three proteins: actin, alpha-S1 casein and ATP synthase alpha chain. Out of a total of 79 spots, only nine proteins were identified due to the low number of available nucleotide sequences in the GenBank. Nevertheless, knowing proteins regarded as differentially expressed is indispensable for hitherto unidentified genes implicated in B. tenagophila resistance and or susceptibility to S. mansoni infection.


Subject(s)
Biomphalaria/parasitology , Proteome/analysis , Schistosoma mansoni/physiology , Schistosomiasis mansoni/immunology , Animals , Biomphalaria/immunology , Electrophoresis, Gel, Two-Dimensional , Heart/parasitology , Host-Parasite Interactions , Isoelectric Focusing , Pericardium/parasitology
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