Do loggerhead sea turtle (Caretta caretta) gut contents reflect the types, colors and sources of plastic pollution in the Southwest Indian Ocean?

We analyzed plastic debris ingested by loggerheads from bycatch between 2007 and 2021 in the Southwest Indian Ocean (SWIO). We also analyzed plastic debris accumulated on beaches of the east coast of Madagascar as a proxy for ocean plastics to compare the characteristics of beached plastics and plastic ingested by turtles. We conducted a "brand audit" of the plastics to determine their country of origin. An oceanic circulation model was used to identify the most likely sources of plastics in the SWIO. In total, 202 of the 266 loggerheads analyzed had ingested plastics. Plastics categorized as "hard" and "white" were equally dominant in loggerheads and on beaches, suggesting no diet selectivity. Both the brand audit and circulation modeling demonstrated that Southeast Asia is the main source of plastic pollution in the region. This study demonstrates that loggerheads can be used as bioindicators of plastic pollution in the SWIO.

Isotopic niche partitioning of co-occurring large marine vertebrates around an Indian ocean tropical oceanic island.

Tropical oceans host a high diversity of species, including large marine consumers. In these oligotrophic ecosystems, oceanic islands often favour the aggregation of species and biomass as they provide feeding opportunities related to the mechanisms of island mass effect. As such, the waters surrounding La Reunion (Southwest Indian Ocean) host seabirds, large pelagic teleosts, elasmobranchs, delphinids and sea turtles. Isotopic niche partitioning and comparison of trophic levels among these species (n = 21) were investigated using stable carbon (δ13C) and nitrogen (δ15N) isotope analysis. Overall, δ13C values were highly variable among taxa, indicating that the species exploit multiple foraging habitats along a coast-open ocean gradient. Overlap in δ15N values was limited, except for teleost species, the two species of sea turtles and two species of delphinids, the Indo-pacific bottlenose dolphin (Tursiops aduncus) and the Spinner dolphin (Stellena longirostris). Stable isotope analyses of samples collected over a 9-years period on different tissues with different integration times provide a consistent picture of the structure of the community of large marine vertebrates species around La Reunion and highlight the underlying mechanisms to limit the competition between species. The wide range of isotopic values confirms that large marine vertebrates have different trophic roles in coastal marine food webs around this oceanic island, which limits their potential of competitive interactions for resources.

Seascape Genetics and the Spatial Ecology of Juvenile Green Turtles.

Understanding how ocean currents impact the distribution and connectivity of marine species, provides vital information for the effective conservation management of migratory marine animals. Here, we used a combination of molecular genetics and ocean drift simulations to investigate the spatial ecology of juvenile green turtle (Chelonia mydas) developmental habitats, and assess the role of ocean currents in driving the dispersal of green turtle hatchlings. We analyzed mitochondrial (mt)DNA sequenced from 358 juvenile green turtles, and from eight developmental areas located throughout the Southwest Indian Ocean (SWIO). A mixed stock analysis (MSA) was applied to estimate the level of connectivity between developmental sites and published genetic data from 38 known genetic stocks. The MSA showed that the juvenile turtles at all sites originated almost exclusively from the three known SWIO stocks, with a clear shift in stock contributions between sites in the South and Central Areas. The results from the genetic analysis could largely be explained by regional current patterns, as shown by the results of passive numerical drift simulations linking breeding sites to developmental areas utilized by juvenile green turtles. Integrating genetic and oceanographic data helps researchers to better understand how marine species interact with ocean currents at different stages of their lifecycle, and provides the scientific basis for effective conservation management.

Contrasted habitats and individual plasticity drive the fine scale movements of juvenile green turtles in coastal ecosystems.

BACKGROUND: A strong behavioural plasticity is commonly evidenced in the movements of marine megafauna species, and it might be related to an adaptation to local conditions of the habitat. One way to investigate such behavioural plasticity is to satellite track a large number of individuals from contrasting foraging grounds, but despite recent advances in satellite telemetry techniques, such studies are still very limited in sea turtles. METHODS: From 2010 to 2018, 49 juvenile green turtles were satellite tracked from five contrasting feeding grounds located in the South-West Indian Ocean in order to (1) assess the diel patterns in their movements, (2) investigate the inter-individual and inter-site variability, and (3) explore the drivers of their daily movements using both static (habitat type and bathymetry) and dynamic variables (daily and tidal cycles). RESULTS: Despite similarities observed in four feeding grounds (a diel pattern with a decreased distance to shore and smaller home ranges at night), contrasted habitats (e.g. mangrove, reef flat, fore-reef, terrace) associated with different resources (coral, seagrass, algae) were used in each island. CONCLUSIONS: Juvenile green turtles in the South-West Indian Ocean show different responses to contrasting environmental conditions - both natural (habitat type and tidal cycle) and anthropogenic (urbanised vs. uninhabited island) demonstrating the ability to adapt to modification of habitat.

Coordination of capsule assembly and cell wall biosynthesis in Staphylococcus aureus.

The Gram-positive cell wall consists of peptidoglycan functionalized with anionic glycopolymers, such as wall teichoic acid and capsular polysaccharide (CP). How the different cell wall polymers are assembled in a coordinated fashion is not fully understood. Here, we reconstitute Staphylococcus aureus CP biosynthesis and elucidate its interplay with the cell wall biosynthetic machinery. We show that the CapAB tyrosine kinase complex controls multiple enzymatic checkpoints through reversible phosphorylation to modulate the consumption of essential precursors that are also used in peptidoglycan biosynthesis. In addition, the CapA1 activator protein interacts with and cleaves lipid-linked CP precursors, releasing the essential lipid carrier undecaprenyl-phosphate. We further provide biochemical evidence that the subsequent attachment of CP is achieved by LcpC, a member of the LytR-CpsA-Psr protein family, using the peptidoglycan precursor native lipid II as acceptor substrate. The Ser/Thr kinase PknB, which can sense cellular lipid II levels, negatively controls CP synthesis. Our work sheds light on the integration of CP biosynthesis into the multi-component Gram-positive cell wall.

Ingestion and defecation of marine debris by loggerhead sea turtles, Caretta caretta, from by-catches in the South-West Indian Ocean.

Marine debris, caused by anthropogenic pollution, is a major problem impacting marine wildlife worldwide. This study documents and quantifies the ingestion and defecation of debris by 74 loggerhead sea turtles, Caretta caretta, in the South-West Indian Ocean. Debris was found in 51.4% of gut or fecal samples of loggerheads by-catch from Reunion Island long liners. Anthropogenic debris was ubiquitous in our samples with plastics accounting for 96.2% of the total debris collected. No significant relationship was detected between the characteristics of ingested debris and the biometric characteristics of loggerheads. The number, weight, volume and mean length of debris were higher in gut content of deceased loggerheads than in fecal samples of live turtles, but not significantly, except for the mean length. This is the first record of debris ingestion by sea turtles in the Indian Ocean and our results highlight the magnitude of this pollution of the marine environment.

Discovery of XL888: a novel tropane-derived small molecule inhibitor of HSP90.

With structural guidance, tropane-derived HTS hits were modified to optimize for HSP90 inhibition and a desirable in vivo profile. Through an iterative SAR development process 12i (XL888) was discovered and shown to reduce HSP90 client protein content in PD studies. Furthermore, efficacy experiments performed in a NCI-N87 mouse xenograft model demonstrated tumor regression in some dosing regimens.

Novel Carboxamide-Based Allosteric MEK Inhibitors: Discovery and Optimization Efforts toward XL518 (GDC-0973).

The ERK/MAP kinase cascade is a key mechanism subject to dysregulation in cancer and is constitutively activated or highly upregulated in many tumor types. Mutations associated with upstream pathway components RAS and Raf occur frequently and contribute to the oncogenic phenotype through activation of MEK and then ERK. Inhibitors of MEK have been shown to effectively block upregulated ERK/MAPK signaling in a range of cancer cell lines and have further demonstrated early evidence of efficacy in the clinic for the treatment of cancer. Guided by structural insight, a strategy aimed at the identification of an optimal diphenylamine-based MEK inhibitor with an improved metabolism and safety profile versus PD-0325901 led to the discovery of development candidate 1-({3,4-difluoro-2-[(2-fluoro-4-iodophenyl)amino]phenyl}carbonyl)-3-[(2S)-piperidin-2-yl]azetidin-3-ol (XL518, GDC-0973) (1). XL518 exhibits robust in vitro and in vivo potency and efficacy in preclinical models with sustained duration of action and is currently in early stage clinical trials.

Cocirculation of measles virus genotype B2 and B3.1 in Central African Republic during the 2000 measles epidemic.

Many African countries have begun implementation of national programs to eliminate measles by the year 2015. However, measles continues to be endemic in Africa. This study describes the first molecular epidemiological study of measles virus circulating in Central African Republic. Two hundred and ten blood samples were tested for measles IgM. Sixty-seven urine samples were collected during measles outbreak in Bangui in 2000 and 2004 and used for genotyping studies. Two different methods were used to determine measles virus genotypes; the recently described real-time PCR-based method and the nucleotide sequencing and phylogenetic analysis methods. These tests revealed the cocirculation of two distinct viruses in Bangui. The proposed subgroup of the B3 genotype, B3.1 was found in 14 samples. This virus has been found in other neighboring countries. More surprising, genotype B2 was found in samples from four patients. The first measles genotype B2 viruses were isolated in Gabon in 1984, but have not been detected until recently when they were identified during a measles outbreak in 2003 in South Africa. This suggests that the circulation of measles genotype B2 has continued in Central Africa during the last 20 years. This study provides the baseline for genetic surveillance of measles virus in Central African Republic. Knowledge of currently circulating measles virus genotype in Central African Republic will help in monitoring the success of measles elimination program.