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1.
J Biomed Inform ; 156: 104673, 2024 Aug.
Article in English | MEDLINE | ID: mdl-38862083

ABSTRACT

OBJECTIVE: Pneumothorax is an acute thoracic disease caused by abnormal air collection between the lungs and chest wall. Recently, artificial intelligence (AI), especially deep learning (DL), has been increasingly employed for automating the diagnostic process of pneumothorax. To address the opaqueness often associated with DL models, explainable artificial intelligence (XAI) methods have been introduced to outline regions related to pneumothorax. However, these explanations sometimes diverge from actual lesion areas, highlighting the need for further improvement. METHOD: We propose a template-guided approach to incorporate the clinical knowledge of pneumothorax into model explanations generated by XAI methods, thereby enhancing the quality of the explanations. Utilizing one lesion delineation created by radiologists, our approach first generates a template that represents potential areas of pneumothorax occurrence. This template is then superimposed on model explanations to filter out extraneous explanations that fall outside the template's boundaries. To validate its efficacy, we carried out a comparative analysis of three XAI methods (Saliency Map, Grad-CAM, and Integrated Gradients) with and without our template guidance when explaining two DL models (VGG-19 and ResNet-50) in two real-world datasets (SIIM-ACR and ChestX-Det). RESULTS: The proposed approach consistently improved baseline XAI methods across twelve benchmark scenarios built on three XAI methods, two DL models, and two datasets. The average incremental percentages, calculated by the performance improvements over the baseline performance, were 97.8% in Intersection over Union (IoU) and 94.1% in Dice Similarity Coefficient (DSC) when comparing model explanations and ground-truth lesion areas. We further visualized baseline and template-guided model explanations on radiographs to showcase the performance of our approach. CONCLUSIONS: In the context of pneumothorax diagnoses, we proposed a template-guided approach for improving model explanations. Our approach not only aligns model explanations more closely with clinical insights but also exhibits extensibility to other thoracic diseases. We anticipate that our template guidance will forge a novel approach to elucidating AI models by integrating clinical domain expertise.


Subject(s)
Artificial Intelligence , Deep Learning , Pneumothorax , Humans , Pneumothorax/diagnostic imaging , Algorithms , Tomography, X-Ray Computed/methods , Medical Informatics/methods
2.
IEEE Trans Pattern Anal Mach Intell ; 44(10): 7062-7077, 2022 Oct.
Article in English | MEDLINE | ID: mdl-34170821

ABSTRACT

Object attention maps generated by image classifiers are usually used as priors for weakly supervised semantic segmentation. However, attention maps usually locate the most discriminative object parts. The lack of integral object localization maps heavily limits the performance of weakly supervised segmentation approaches. This paper attempts to investigate a novel way to identify entire object regions in a weakly supervised manner. We observe that image classifiers' attention maps at different training phases may focus on different parts of the target objects. Based on this observation, we propose an online attention accumulation (OAA) strategy that utilizes the attention maps at different training phases to obtain more integral object regions. Specifically, we maintain a cumulative attention map for each target category in each training image and utilize it to record the discovered object regions at different training phases. Albeit OAA can effectively mine more object regions for most images, for some training images, the range of the attention movement is not large, limiting the generation of integral object attention regions. To overcome this problem, we propose incorporating an attention drop layer into the online attention accumulation process to enlarge the range of attention movement during training explicitly. Our method (OAA) can be plugged into any classification network and progressively accumulate the discriminative regions into cumulative attention maps as the training process goes. Additionally, we also explore utilizing the final cumulative attention maps to serve as the pixel-level supervision, which can further assist the network in discovering more integral object regions. When applying the resulting attention maps to the weakly supervised semantic segmentation task, our approach improves the existing state-of-the-art methods on the PASCAL VOC 2012 segmentation benchmark, achieving a mIoU score of 67.2 percent on the test set.

3.
IEEE Trans Image Process ; 30: 5875-5888, 2021.
Article in English | MEDLINE | ID: mdl-34156941

ABSTRACT

The class activation maps are generated from the final convolutional layer of CNN. They can highlight discriminative object regions for the class of interest. These discovered object regions have been widely used for weakly-supervised tasks. However, due to the small spatial resolution of the final convolutional layer, such class activation maps often locate coarse regions of the target objects, limiting the performance of weakly-supervised tasks that need pixel-accurate object locations. Thus, we aim to generate more fine-grained object localization information from the class activation maps to locate the target objects more accurately. In this paper, by rethinking the relationships between the feature maps and their corresponding gradients, we propose a simple yet effective method, called LayerCAM. It can produce reliable class activation maps for different layers of CNN. This property enables us to collect object localization information from coarse (rough spatial localization) to fine (precise fine-grained details) levels. We further integrate them into a high-quality class activation map, where the object-related pixels can be better highlighted. To evaluate the quality of the class activation maps produced by LayerCAM, we apply them to weakly-supervised object localization and semantic segmentation. Experiments demonstrate that the class activation maps generated by our method are more effective and reliable than those by the existing attention methods. The code will be made publicly available.

4.
IEEE Trans Image Process ; 30: 5984-5996, 2021.
Article in English | MEDLINE | ID: mdl-34166191

ABSTRACT

Label smoothing is an effective regularization tool for deep neural networks (DNNs), which generates soft labels by applying a weighted average between the uniform distribution and the hard label. It is often used to reduce the overfitting problem of training DNNs and further improve classification performance. In this paper, we aim to investigate how to generate more reliable soft labels. We present an Online Label Smoothing (OLS) strategy, which generates soft labels based on the statistics of the model prediction for the target category. The proposed OLS constructs a more reasonable probability distribution between the target categories and non-target categories to supervise DNNs. Experiments demonstrate that based on the same classification models, the proposed approach can effectively improve the classification performance on CIFAR-100, ImageNet, and fine-grained datasets. Additionally, the proposed method can significantly improve the robustness of DNN models to noisy labels compared to current label smoothing approaches. The source code is available at our project page: https://mmcheng.net/ols/.


Subject(s)
Deep Learning , Image Processing, Computer-Assisted/methods , Algorithms , Databases, Factual , Humans
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