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1.
Proc Biol Sci ; 290(2009): 20231476, 2023 10 25.
Article in English | MEDLINE | ID: mdl-37848062

ABSTRACT

Reef-building crustose coralline algae (CCA) are known to facilitate the settlement and metamorphosis of scleractinian coral larvae. In recent decades, CCA coverage has fallen globally and degrading environmental conditions continue to reduce coral survivorship, spurring new restoration interventions to rebuild coral reef health. In this study, naturally produced chemical compounds (metabolites) were collected from two pantropical CCA genera to isolate and classify those that induce coral settlement. In experiments using four ecologically important Caribbean coral species, we demonstrate the applicability of extracted, CCA-derived metabolites to improve larval settlement success in coral breeding and restoration efforts. Tissue-associated CCA metabolites induced settlement of one coral species, Orbicella faveolata, while metabolites exuded by CCA (exometabolites) induced settlement of three species: Acropora palmata, Colpophyllia natans and Orbicella faveolata. In a follow-up experiment, CCA exometabolites fractionated and preserved using two different extraction resins induced the same level of larval settlement as the unfractionated positive control exometabolites. The fractionated CCA exometabolite pools were characterized using liquid chromatography tandem mass spectrometry, yielding 145 distinct molecular subnetworks that were statistically defined as CCA-derived and could be classified into 10 broad chemical classes. Identifying these compounds can reveal their natural prevalence in coral reef habitats and facilitate the development of new applications to enhance larval settlement and the survival of coral juveniles.


Subject(s)
Anthozoa , Animals , Larva , Cues , Coral Reefs , Ecosystem
2.
Biol Reprod ; 104(3): 611-623, 2021 03 11.
Article in English | MEDLINE | ID: mdl-33165521

ABSTRACT

Approximately, 25% of all preterm births are due to preterm premature rupture of membranes. Mice deficient in proteoglycans biglycan (Bgn) and decorin (Dcn) display abnormal fetal membranes and increased incidence of preterm birth. We conducted RNA-Seq to profile fetal membranes and identify molecular pathways that may lead to preterm birth in double knockout (DKO) mice (Bgn-/-; Dcn-/-) compared to wild-type (WT) at two different gestational stages, E12 and E18 (n = 3 in each group). 3264 transcripts were differentially regulated in E18 DKO vs. WT fetal membranes, and 96 transcripts differentially regulated in E12 DKO vs. WT fetal membranes (FDR < 0.05, log 2 FC ≥ 1). Differentially regulated transcripts in E18 DKO fetal membranes were significantly enriched for genes involved in cell cycle regulation, extracellular matrix-receptor interaction, and the complement cascade. Fifty transcripts involved in the cell cycle were altered in E18 DKO fetal membranes (40↓, 10↑, FDR < 0.05), including p21 and p57 (↑), and Tgfb2, Smad3, CycA, Cdk1, and Cdk2(↓). Thirty-one transcripts involved in the complement cascade were altered (11↓, 20↑, FDR < 0.05) in E18 DKO fetal membranes, including C1q, C2, and C3 (↑). Differentially expressed genes in the top three molecular pathways (1) showed evidence of negative or purifying selection, and (2) were significantly enriched (Z-score > 10) for transcription factor binding sites for Nr2f1 at E18. We propose that in DKO mice, cell cycle arrest results in lack of cell proliferation in fetal membranes, inability to contain the growing fetus, and preterm birth.


Subject(s)
Biglycan/metabolism , Decorin/metabolism , Extraembryonic Membranes/metabolism , Gene Expression Regulation , Animals , Biglycan/genetics , Biological Evolution , Cell Cycle/physiology , Complement System Proteins/metabolism , Decorin/genetics , Disease Models, Animal , Extracellular Matrix , Humans , Infant, Newborn , Mice , Mice, Knockout , Premature Birth , RNA-Seq , Transcriptome
3.
Biomaterials ; 180: 143-162, 2018 10.
Article in English | MEDLINE | ID: mdl-30036727

ABSTRACT

Bone fractures are the most common traumatic injuries in humans. The repair of bone fractures is a regenerative process that recapitulates many of the biological events of embryonic skeletal development. Most of the time it leads to successful healing and the recovery of the damaged bone. Unfortunately, about 5-10% of fractures will lead to delayed healing or non-union, more so in the case of co-morbidities such as diabetes. In this article, we review the different strategies to heal bone defects using synthetic bone graft substitutes, biologically active substances and stem cells. The majority of currently available reviews focus on strategies that are still at the early stages of development and use mostly in vitro experiments with cell lines or stem cells. Here, we focus on what is already implemented in the clinics, what is currently in clinical trials, and what has been tested in animal models. Treatment approaches can be classified in three major categories: i) synthetic bone graft substitutes (BGS) whose architecture and surface can be optimized; ii) BGS combined with bioactive molecules such as growth factors, peptides or small molecules targeting bone precursor cells, bone formation and metabolism; iii) cell-based strategies with progenitor cells combined or not with active molecules that can be injected or seeded on BGS for improved delivery. We review the major types of adult stromal cells (bone marrow, adipose and periosteum derived) that have been used and compare their properties. Finally, we discuss the remaining challenges that need to be addressed to significantly improve the healing of bone defects.


Subject(s)
Bone Regeneration/physiology , Tissue Engineering/methods , Animals , Biocompatible Materials/chemistry , Humans , Stem Cells/cytology , Stem Cells/physiology
4.
J Biomech Eng ; 139(11)2017 Nov 01.
Article in English | MEDLINE | ID: mdl-28916837

ABSTRACT

Rotator cuff tears (RCTs) are one of the primary causes of shoulder pain and dysfunction in the upper extremity accounting over 4.5 million physician visits per year with 250,000 rotator cuff repairs being performed annually in the U.S. While the tear is often considered an injury to a specific tendon/tendons and consequently treated as such, there are secondary effects of RCTs that may have significant consequences for shoulder function. Specifically, RCTs have been shown to affect the joint cartilage, bone, the ligaments, as well as the remaining intact tendons of the shoulder joint. Injuries associated with the upper extremities account for the largest percent of workplace injuries. Unfortunately, the variable success rate related to RCTs motivates the need for a better understanding of the biomechanical consequences associated with the shoulder injuries. Understanding the timing of the injury and the secondary anatomic consequences that are likely to have occurred are also of great importance in treatment planning because the approach to the treatment algorithm is influenced by the functional and anatomic state of the rotator cuff and the shoulder complex in general. In this review, we summarized the contribution of RCTs to joint stability in terms of both primary (injured tendon) and secondary (remaining tissues) consequences including anatomic changes in the tissues surrounding the affected tendon/tendons. The mechanical basis of normal shoulder joint function depends on the balance between active muscle forces and passive stabilization from the joint surfaces, capsular ligaments, and labrum. Evaluating the role of all tissues working together as a system for maintaining joint stability during function is important to understand the effects of RCT, specifically in the working population, and may provide insight into root causes of shoulder injury.


Subject(s)
Mechanical Phenomena , Rotator Cuff Injuries/pathology , Shoulder Joint , Animals , Biomechanical Phenomena , Tendons/pathology
5.
J Biomed Mater Res A ; 82(4): 1012-21, 2007 Sep 15.
Article in English | MEDLINE | ID: mdl-17370323

ABSTRACT

An improved method to determine material volumes from microcomputed tomography (micro-CT) data is presented. In particular, the method can account for materials with significantly overlapping peaks and small volumes. The example case is a hydroxyapatite scaffold cultured with osteoprogenitor cells. The histogram obtained from the micro-CT data is decomposed into a Gaussian attenuation distribution for each material in the sample, including scaffold, pore and surface tissue, and background. This is done by creating a training set of attenuation data to find initial parameters and then using a nonlinear curve fit, which produced R(2) values greater than 0.998. To determine the material volumes, the curves that simulated each material are integrated, allowing small volume fractions to be accurately quantified. Thresholds for visualizing the samples are chosen based on volume fractions of the Gaussian curves. Additionally, the use of dual-material regions helps accurately visualize tissue on the scaffold, which is otherwise difficult because of the large volume fraction of scaffold. Finally, the curve integration method is compared with Bayesian estimation and intersection thresholding methods. The pore tissue is not represented at all by the Bayesian estimation, and the intersection thresholding method is less accurate than the curve integration method.


Subject(s)
Biocompatible Materials , Durapatite , Tissue Engineering , Tomography, X-Ray Computed/methods , Animals , Bone Marrow Cells/cytology , Bone and Bones , Cell Line , Data Interpretation, Statistical , Materials Testing , Mice , Microscopy, Electron, Scanning , Multipotent Stem Cells/cytology , Osseointegration , Stromal Cells/cytology , Tomography, X-Ray Computed/statistics & numerical data
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