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1.
Ecol Appl ; 33(8): e2923, 2023 Dec.
Article in English | MEDLINE | ID: mdl-37788067

ABSTRACT

Assessing the effects of industrial development on wildlife is a key objective of managers and conservation practitioners. However, wildlife responses are often only investigated with respect to the footprint of infrastructure, even though human activity can strongly mediate development impacts. In Arctic Alaska, there is substantial interest in expanding energy development, raising concerns about the potential effects on barren-ground caribou (Rangifer tarandus granti). While caribou generally avoid industrial infrastructure, little is known about the role of human activity in moderating their responses, and whether managing activity levels could minimize development effects. To address this uncertainty, we examined the influence of traffic volume on caribou summer space use and road crossings in the Central Arctic Herd within the Kuparuk and Milne Point oil fields on the North Slope of Alaska. We first modeled spatiotemporal variation in hourly traffic volumes across the road system from traffic counter data using gradient-boosted regression trees. We then used generalized additive models to estimate nonlinear step selection functions and road-crossing probabilities from collared female caribou during the post-calving and insect harassment seasons, when they primarily interact with roads. Step selection analyses revealed that caribou selected areas further from roads (~1-3 km) during the post-calving and mosquito seasons and selected areas with lower traffic volumes during all seasons, with selection probabilities peaking when traffic was <5 vehicles/h. Using road-crossing models, we found that caribou were less likely to cross roads during the insect seasons as traffic increased, but that response dissipated as insect harassment became more severe. Past studies suggested that caribou exhibit behavioral responses when traffic exceeds 15 vehicles/h, but our results demonstrate behavioral responses at much lower traffic levels. Our results illustrate that vehicle activity mediates caribou responses to road infrastructure, information that can be used in future land-use planning to minimize the behavioral responses of caribou to industrial development in sensitive Arctic landscapes.


Subject(s)
Reindeer , Animals , Humans , Reindeer/physiology , Arctic Regions , Insecta/physiology , Seasons , Alaska , Animals, Wild
2.
Ecol Evol ; 12(10): e9406, 2022 Oct.
Article in English | MEDLINE | ID: mdl-36248671

ABSTRACT

The phylogeography of the American black bear (Ursus americanus) is characterized by isolation into glacial refugia, followed by population expansion and genetic admixture. Anthropogenic activities, including overharvest, habitat loss, and transportation infrastructure, have also influenced their landscape genetic structure. We describe the genetic structure of the American black bear in the American Southwest and northern Mexico and investigate how prehistoric and contemporary forces shaped genetic structure and influenced gene flow. Using a suite of microsatellites and a sample of 550 bears, we identified 14 subpopulations organized hierarchically following the distribution of ecoregions and mountain ranges containing black bear habitat. The pattern of subdivision we observed is more likely a product of postglacial habitat fragmentation during the Pleistocene and Holocene, rather than a consequence of contemporary anthropogenic barriers to movement during the Anthropocene. We used linear mixed-effects models to quantify the relationship between landscape resistance and genetic distance among individuals, which indicated that both isolation by resistance and geographic distance govern gene flow. Gene flow was highest among subpopulations occupying large tracts of contiguous habitat, was reduced among subpopulations in the Madrean Sky Island Archipelago, where montane habitat exists within a lowland matrix of arid lands, and was essentially nonexistent between two isolated subpopulations. We found significant asymmetric gene flow supporting the hypothesis that bears expanded northward from a Pleistocene refugium located in the American Southwest and northern Mexico and that major highways were not yet affecting gene flow. The potential vulnerability of the species to climate change, transportation infrastructure, and the US-Mexico border wall highlights conservation challenges and opportunities for binational collaboration.

3.
Ecol Evol ; 11(17): 11664-11688, 2021 Sep.
Article in English | MEDLINE | ID: mdl-34522332

ABSTRACT

Spatiotemporal variation in forage is a primary driver of ungulate behavior, yet little is known about the nutritional components they select, and how selection varies across the growing season with changes in forage quality and quantity. We addressed these uncertainties in barren-ground caribou (Rangifer tarandus), which experience their most important foraging opportunities during the short Arctic summer. Recent declines in Arctic caribou populations have raised concerns about the influence of climate change on summer foraging opportunities, given shifting vegetation conditions and insect harassment, and their potential effects on caribou body condition and demography. We examined Arctic caribou selection of summer forage by pairing locations from females in the Central Arctic Herd of Alaska with spatiotemporal predictions of biomass, digestible nitrogen (DN), and digestible energy (DE). We then assessed selection for these nutritional components across the growing season at landscape and patch scales, and determined whether foraging opportunities were constrained by insect harassment. During early summer, at the landscape scale, caribou selected for intermediate biomass and high DN and DE, following expectations of the forage maturation hypothesis. At the patch scale, however, caribou selected for high values of all forage components, particularly DN, suggesting that protein may be limiting. During late summer, after DN declined below the threshold for protein gain, caribou exhibited a switch at both spatial scales, selecting for higher biomass, likely enabling mass and fat deposition. Mosquito activity strongly altered caribou selection of forage and increased their movement rates, while oestrid fly activity had little influence. Our results demonstrate that early and late summer periods afford Arctic caribou distinct foraging opportunities, as they prioritize quality earlier in the summer and quantity later. Climate change may further constrain caribou access to DN as earlier, warmer Arctic summers may be associated with reduced DN and increased mosquito harassment.

4.
Glob Chang Biol ; 27(19): 4546-4563, 2021 10.
Article in English | MEDLINE | ID: mdl-33993595

ABSTRACT

Annual variation in phenology can have profound effects on the behavior of animals. As climate change advances spring phenology in ecosystems around the globe, it is becoming increasingly important to understand how animals respond to variation in the timing of seasonal events and how their responses may shift in the future. We investigated the influence of spring phenology on the behavior of migratory, barren-ground caribou (Rangifer tarandus), a species that has evolved to cope with short Arctic summers. Specifically, we examined the effect of spring snow melt and vegetation growth on the current and potential future space-use patterns of the Porcupine Caribou Herd (PCH), which exhibits large, inter-annual shifts in their calving and post-calving distributions across the U.S.-Canadian border. We quantified PCH selection for snow melt and vegetation phenology using machine learning models, determined how selection resulted in annual shifts in space-use, and then projected future distributions based on climate-driven phenology models. Caribou exhibited strong, scale-dependent selection for both snow melt and vegetation growth. During the calving season, caribou selected areas at finer scales where the snow had melted and vegetation was greening, but within broader landscapes that were still brown or snow covered. During the post-calving season, they selected vegetation with intermediate biomass expected to have high forage quality. Annual variation in spring phenology predicted major shifts in PCH space-use. In years with early spring phenology, PCH predominately used habitat in Alaska, while in years with late phenology, they spent more time in Yukon. Future climate conditions were projected to advance spring phenology, shifting PCH calving and post-calving distributions further west into Alaska. Our results demonstrate that caribou selection for habitat in specific phenological stages drive dramatic shifts in annual space-use patterns, and will likely affect future distributions, underscoring the importance of maintaining sufficient suitable habitat to allow for behavioral plasticity.


Subject(s)
Ecosystem , Reindeer , Animals , Canada , Seasons , Snow
5.
Conserv Biol ; 34(6): 1383-1392, 2020 12.
Article in English | MEDLINE | ID: mdl-33245812

ABSTRACT

Conflicts between people and wild animals are increasing globally, often with serious consequences for both. Local regulations or ordinances are frequently used to promote human behaviors that minimize these conflicts (risk-reducing behaviors), but compliance with ordinances can be highly variable. While efforts to increase compliance could be improved through applications of conservation psychology, little is known about the relative influence of different factors motivating compliance. Using concepts from psychology and risk theory, we conducted a longitudinal study pairing data from mail surveys with direct observations of compliance with a wildlife ordinance requiring residents to secure residential garbage from black bears (Ursus americanus). We assessed the relative influence of beliefs and attitudes toward bears and bear proofing, perceived behavioral control, perceived risks and benefits assigned to bears, norms, trust in management, previous experience with conflicts, and demographics on compliance behavior (i.e., bear proofing). Data on previous experience were obtained through direct observation and survey reports. We found that higher compliance rates were associated with more observed conflicts on a respondent's block. Counter to expectations, however, residents were less compliant when they were more trusting of the management agency and perceived more benefits from bears. We suggest that messages have the potential to increase compliance when they empower residents by linking successful management of conflicts to individual actions and emphasize how reducing conflicts could maintain benefits provided by wildlife. Modifying existing educational materials to account for these psychological considerations and evaluating their impact on compliance behavior over time are important next steps in changing human behaviors relevant to the globally important problem of human-wildlife conflict.


Impulsores Psicológicos de los Comportamientos Reductores de Riesgo para Limitar el Conflicto Humano - Fauna Resumen Los conflictos entre las personas y la fauna cada vez son más a nivel mundial y con frecuencia tienen consecuencias severas para ambos. Las regulaciones o decretos locales se usan frecuentemente para promover comportamientos humanos que minimizan estos conflictos (comportamientos reductores de riesgo), pero el cumplimiento de los decretos puede ser altamente variable. Mientras que los esfuerzos por incrementar el cumplimiento podrían mejorar por medio de la aplicación de la psicología de la conservación, se conoce poco sobre la influencia relativa de los diferentes factores que motivan al cumplimiento. Realizamos un estudio longitudinal mediante conceptos tomados de la psicología y la teoría del riesgo. Este estudio emparejó datos obtenidos de encuestas por correo con observaciones directas del cumplimiento de un decreto de fauna que requiere que los residentes protejan los desechos residenciales de los osos negros (Ursus americanus) (es decir, hacerlas a prueba de osos). Evaluamos la influencia relativa de las creencias y las actitudes hacia los osos y hacia hacer los desechos a prueba de osos, el control del comportamiento percibido, los riesgos percibidos y los beneficios asignados a los osos, las normas, la confianza en el manejo, la experiencia previa con conflictos y la demografía del comportamiento de cumplimiento. Los datos sobre la experiencia previa se obtuvieron mediante observación directa y reportes de las encuestas. Encontramos que las tasas más altas de cumplimiento estuvieron asociadas con un mayor número de conflictos observados en la cuadra del respondiente. Sin embargo, contrario a las expectativas, los residentes fueron menos obedientes cuando tuvieron mayor confianza en la agencia de manejo y percibieron más beneficios de la presencia de osos. Sugerimos que los mensajes tienen el potencial de incrementar el cumplimiento cuando empoderan a los residentes al vincular el manejo exitoso de los conflictos con las acciones individuales y enfatizan cómo la reducción de los conflictos podría mantener los beneficios que proporciona la fauna. La modificación de los materiales educativos existentes para que tomen en cuenta estas consideraciones psicológicas y la evaluación de su impacto sobre el comportamiento de cumplimiento a lo largo del tiempo son los siguientes pasos importantes para modificar el comportamiento humano relevante para el problema mundialmente importante que es el conflicto humano - fauna.


Subject(s)
Animals, Wild , Ursidae , Animals , Attitude , Conservation of Natural Resources , Humans , Longitudinal Studies
6.
Sci Rep ; 9(1): 2197, 2019 02 21.
Article in English | MEDLINE | ID: mdl-30792484

ABSTRACT

Human foods have become a pervasive subsidy in many landscapes, and can dramatically alter wildlife behavior, physiology, and demography. While such subsidies can enhance wildlife condition, they can also result in unintended negative consequences on individuals and populations. Seasonal hibernators possess a remarkable suite of adaptations that increase survival and longevity in the face of resource and energetic limitations. Recent work has suggested hibernation may also slow the process of senescence, or cellular aging. We investigated how use of human foods influences hibernation, and subsequently cellular aging, in a large-bodied hibernator, black bears (Ursus americanus). We quantified relative telomere length, a molecular marker for cellular age, and compared lengths in adult female bears longitudinally sampled over multiple seasons. We found that bears that foraged more on human foods hibernated for shorter periods of time. Furthermore, bears that hibernated for shorter periods of time experienced accelerated telomere attrition. Together these results suggest that although hibernation may ameliorate cellular aging, foraging on human food subsidies could counteract this process by shortening hibernation. Our findings highlight how human food subsidies can indirectly influence changes in aging at the molecular level.


Subject(s)
Adaptation, Physiological/physiology , Cellular Senescence/physiology , Food , Hibernation/physiology , Ursidae/physiology , Animal Nutritional Physiological Phenomena , Animals , Animals, Wild , Antioxidants/analysis , Antioxidants/metabolism , DNA Damage , Diet , Female , Food/standards , Human Activities , Humans , Oxidative Stress/physiology , Seasons , Telomere Shortening/physiology
7.
Sci Rep ; 7(1): 15234, 2017 11 09.
Article in English | MEDLINE | ID: mdl-29123212

ABSTRACT

Mule deer (Odocoileus hemionus) populations in the western United States provide many benefits to local economies but can also cause considerable damage to agriculture, particularly damage to lucrative crops. Limited information exists to understand resource selection of mule deer in response to annual variation in crop rotation and climatic conditions. We tested the hypothesis that mule deer select certain crops, and in particular sunflower, based on annual climatic variability. Our objective was to use movements, estimates of home range, and resource selection analysis to identify resources selected by mule deer. We used annually-derived crop-specific datasets along with Global Positioning System collars to monitor 14 mule deer in an agricultural area near public lands in southwestern Colorado, USA. We estimated home ranges for two winter seasons that ranged between 7.68 and 9.88 km2, and for two summer seasons that ranged between 5.51 and 6.24 km2. Mule deer selected areas closer to forest and alfalfa for most periods during 2012, but selected areas closer to sunflower in a majority of periods during 2013. Considerable annual variation in climate patterns and precipitation levels appeared to influence selection by mule deer because of variability in crop rotation and success of germination of specific crops.


Subject(s)
Animal Distribution , Deer/growth & development , Feeding Behavior , Agriculture/methods , Animals , Climate , Colorado , Locomotion
8.
Glob Chang Biol ; 23(2): 578-591, 2017 02.
Article in English | MEDLINE | ID: mdl-27428886

ABSTRACT

Land-use change due to anthropogenic development is pervasive across the globe and commonly associated with negative consequences for biodiversity. While land-use change has been linked to shifts in the behavior and habitat-use patterns of wildlife species, little is known about its influence on animal population dynamics, despite the relevance of such information for conservation. We conducted the first broad-scale investigation correlating temporal patterns of land-use change with the demographic rates of mule deer, an iconic species in the western United States experiencing wide-scale population declines. We employed a unique combination of long-term (1980-2010) data on residential and energy development across western Colorado, in conjunction with congruent data on deer recruitment, to quantify annual changes in land-use and correlate those changes with annual indices of demographic performance. We also examined annual variation in weather conditions, which are well recognized to influence ungulate productivity, and provided a basis for comparing the relative strength of different covariates in their association with deer recruitment. Using linear mixed models, we found that increasing residential and energy development within deer habitat were correlated with declining recruitment rates, particularly within seasonal winter ranges. Residential housing had two times the magnitude of effect of any other factor we investigated, and energy development had an effect size similar to key weather variables known to be important to ungulate dynamics. This analysis is the first to correlate a demographic response in mule deer with residential and energy development at large spatial extents relevant to population performance, suggesting that further increases in these development types on deer ranges are not compatible with the goal of maintaining highly productive deer populations. Our results underscore the significance of expanding residential development on mule deer populations, a factor that has received little research attention in recent years, despite its rapidly increasing footprint across the landscape.


Subject(s)
Deer , Ecosystem , Energy Intake , Animals , Colorado , Population Dynamics , Seasons , Weather
9.
World J Psychiatry ; 6(2): 226-32, 2016 Jun 22.
Article in English | MEDLINE | ID: mdl-27354965

ABSTRACT

AIM: To validate the first third-person-rated measure assessing combat-related peritraumatic stress symptoms and evaluate its psychometric properties and war-zone applicability. METHODS: The valid assessment of peritraumatic symptoms in the theater of military operations represents a significant challenge in combat-related, mental health research, which mainly relies on retrospective, subjective self-report ratings. This longitudinal observational study used data from actively deployed troops to correlate third-person observer ratings of deployment peritraumatic behaviors [Peritraumatic Behavior Questionnaire - Observer Rated (PBQ-OR)] collected on a bi-monthly basis with post-deployment (1-wk follow-up) ratings of the previously validated PBQ self-rate version (PBQ-SR), and (3-mo follow-up) clinician assessed and self-report posttraumatic stress disorder (PTSD) symptoms (Clinician Administered PTSD Scale, PTSD Checklist). Cronbach's alpha (α) and correlation coefficients were calculated to assess internal reliability and concurrent validity respectively. RESULTS: Eight hundred and sixty male Marines were included in this study after signing informed consents at pre-deployment (mean age 23.2 ± 2.6 years). Although our findings were limited by an overall sparse return rate of PBQ-OR ratings, the main results indicate satisfactory psychometric properties with good internal consistency for the PBQ-OR (α = 0.88) and high convergent and concurrent validity with 1-wk post-deployment PBQ-SR ratings and 3-mo posttraumatic stress symptoms. Overall, later PBQ-OR report date was associated with higher correlation between PBQ-OR and post-deployment measures. Kappa analysis between PBQ-OR and PBQ-SR single items, showed best agreement in questions relating of mortal peril, desire for revenge, and experience of intense physical reactions. Logistic regression demonstrated satisfactory predictive validity of PBQ-OR total score with respect to PTSD caseness (OR = 1.0513; 95%CI: 1.011-1.093; P = 0.02). CONCLUSION: Since no comparable tools have been developed, PBQ-OR could be valuable as real-time screening tool for earlier detection of Service Members at risk.

10.
Sci Total Environ ; 563-564: 340-50, 2016 Sep 01.
Article in English | MEDLINE | ID: mdl-27139306

ABSTRACT

Animal waste, stream water, and streambed sediment from 19 small (<32km(2)) watersheds in 12U.S. states having either no major animal agriculture (control, n=4), or predominantly beef (n=4), dairy (n=3), swine (n=5), or poultry (n=3) were tested for: 1) cholesterol, coprostanol, estrone, and fecal indicator bacteria (FIB) concentrations, and 2) shiga-toxin producing and enterotoxigenic Escherichia coli, Salmonella, Campylobacter, and pathogenic and vancomycin-resistant enterococci by polymerase chain reaction (PCR) on enrichments, and/or direct quantitative PCR. Pathogen genes were most frequently detected in dairy wastes, followed by beef, swine and poultry wastes in that order; there was only one detection of an animal-source-specific pathogen gene (stx1) in any water or sediment sample in any control watershed. Post-rainfall pathogen gene numbers in stream water were significantly correlated with FIB, cholesterol and coprostanol concentrations, and were most highly correlated in dairy watershed samples collected from 3 different states. Although collected across multiple states and ecoregions, animal-waste gene profiles were distinctive via discriminant analysis. Stream water gene profiles could also be discriminated by the watershed animal type. Although pathogen genes were not abundant in stream water or streambed samples, PCR on enrichments indicated that many genes were from viable organisms, including several (shiga-toxin producing or enterotoxigenic E. coli, Salmonella, vancomycin-resistant enterococci) that could potentially affect either human or animal health. Pathogen gene numbers and types in stream water samples were influenced most by animal type, by local factors such as whether animals had stream access, and by the amount of local rainfall, and not by studied watershed soil or physical characteristics. Our results indicated that stream water in small agricultural U.S. watersheds was susceptible to pathogen gene inputs under typical agricultural practices and environmental conditions. Pathogen gene profiles may offer the potential to address both source of, and risks associated with, fecal pollution.


Subject(s)
Animal Husbandry , Bacteria/isolation & purification , Feces/chemistry , Feces/microbiology , Rivers/microbiology , Animals , Bacteria/genetics , Cattle , Escherichia coli/genetics , Escherichia coli/isolation & purification , Genes, Bacterial , Poultry , Shigella/genetics , Shigella/isolation & purification , Sus scrofa , United States
11.
J Water Health ; 13(3): 680-92, 2015 Sep.
Article in English | MEDLINE | ID: mdl-26322754

ABSTRACT

Methicillin-resistant Staphylococcus aureus (MRSA) are a threat to human health worldwide, and although detected at marine beaches, they have been largely unstudied at freshwater beaches. Genes indicating S. aureus (SA; femA) and methicillin resistance (mecA) were detected at 11 and 12 of 13 US Great Lakes beaches and in 18% or 27% of 287 recreational water samples, respectively. Eight beaches had mecA+femA (potential MRSA) detections. During an intensive study, higher bather numbers, staphylococci concentrations, and femA detections were found in samples collected after noon than before noon. Local population density, beach cloud cover, and beach wave height were significantly correlated with SA or MRSA detection frequency. The Panton-Valentine leukocidin gene, associated with community-acquired MRSA, was detected in 12 out of 27 potential MRSA samples. The femA gene was detected less frequently at beaches that met US enterococci criteria or EU enterococci 'excellent' recreational water quality, but was not related to Escherichia coli-defined criteria. Escherichia coli is often the only indicator used to determine water quality at US beaches, given the economic and healthcare burden that can be associated with infections caused by SA and MRSA, monitoring of recreational waters for non-fecal bacteria such as staphylococci and/or SA may be warranted.


Subject(s)
Bathing Beaches , Fresh Water/microbiology , Staphylococcus aureus/genetics , Staphylococcus aureus/isolation & purification , DNA, Bacterial/analysis , DNA, Bacterial/genetics , Genes, Bacterial/genetics , Great Lakes Region , Methicillin-Resistant Staphylococcus aureus/genetics , Methicillin-Resistant Staphylococcus aureus/isolation & purification , Water Microbiology
12.
Appl Environ Microbiol ; 81(10): 3430-41, 2015 May 15.
Article in English | MEDLINE | ID: mdl-25769829

ABSTRACT

Manure spills into streams are relatively frequent, but no studies have characterized stream contamination with zoonotic and veterinary pathogens, or fecal chemicals, following a spill. We tested stream water and sediment over 25 days and downstream for 7.6 km for the following: fecal indicator bacteria (FIB), the fecal indicator chemicals cholesterol and coprostanol, 20 genes for zoonotic and swine-specific bacterial pathogens by presence/absence PCR for viable cells, one swine-specific Escherichia coli toxin gene (STII gene) by quantitative PCR (qPCR), and nine human and animal viruses by qPCR or reverse transcription-qPCR. Twelve days postspill, and 4.2 km downstream, water concentrations of FIB, cholesterol, and coprostanol were 1 to 2 orders of magnitude greater than those detected before, or above, the spill, and genes indicating viable zoonotic or swine-infectious Escherichia coli were detected in water or sediment. STII gene levels increased from undetectable before or above the spill to 10(5) copies/100 ml of water 12 days postspill. Thirteen of 14 water (8/9 sediment) samples had viable STII-carrying cells postspill. Eighteen days postspill, porcine adenovirus and teschovirus were detected 5.6 km downstream. FIB concentrations (per gram [wet weight]) in sediment were greater than in water, and sediment was a continuous reservoir of genes and chemicals postspill. Constituent concentrations were much lower, and detections less frequent, in a runoff event (200 days postspill) following manure application, although the swine-associated STII and stx2e genes were detected. Manure spills are an underappreciated pathway for livestock-derived contaminants to enter streams, with persistent environmental outcomes and the potential for human and veterinary health consequences.


Subject(s)
Bacteria/isolation & purification , Bacterial Infections/veterinary , Geologic Sediments/microbiology , Manure/microbiology , Rivers/microbiology , Swine Diseases/microbiology , Zoonoses/microbiology , Animals , Bacteria/classification , Bacteria/genetics , Bacterial Infections/microbiology , Bacterial Proteins , Feces/microbiology , Swine , Water Pollution
13.
J Wildl Dis ; 50(4): 979-81, 2014 Oct.
Article in English | MEDLINE | ID: mdl-25014907

ABSTRACT

We opportunistically evaluated a combination of acepromazine maleate and medetomidine HCl for use in sedating Rocky Mountain elk (Cervus elaphus nelsoni) and black bears (Ursus americanus) as an alternative to scheduled drug combinations. This combination was safe and effective with limitations inherent in its sedative rather than anesthetic properties.


Subject(s)
Acepromazine/pharmacology , Deer , Dopamine Antagonists/pharmacology , Hypnotics and Sedatives/pharmacology , Medetomidine/pharmacology , Ursidae , Acepromazine/administration & dosage , Animals , Dopamine Antagonists/administration & dosage , Drug Combinations , Hypnotics and Sedatives/administration & dosage , Medetomidine/administration & dosage
14.
Environ Sci Technol ; 47(21): 12054-63, 2013.
Article in English | MEDLINE | ID: mdl-24073635

ABSTRACT

Understanding of factors that influence Escherichia coli (EC) and enterococci (ENT) concentrations, pathogen occurrence, and microbial sources at Great Lakes beaches comes largely from individual beach studies. Using 12 representative beaches, we tested enrichment cultures from 273 beach water and 22 tributary samples for EC, ENT, and genes indicating the bacterial pathogens Shiga-toxin producing E. coli (STEC), Shigella spp. , Salmonella spp , Campylobacter jejuni/coli , and methicillin-resistant Staphylococcus aureus , and 108-145 samples for Bacteroides human, ruminant, and gull source-marker genes. EC/ENT temporal patterns, general Bacteroides concentration, and pathogen types and occurrence were regionally consistent (up to 40 km), but beach catchment variables (drains/creeks, impervious surface, urban land cover) influenced exceedances of EC/ENT standards and detections of Salmonella and STEC. Pathogen detections were more numerous when the EC/ENT Beach Action Value (but not when the Geometric Mean and Statistical Threshold Value) was exceeded. EC, ENT, and pathogens were not necessarily influenced by the same variables. Multiple Bacteroides sources, varying by date, occurred at every beach. Study of multiple beaches in different geographic settings provided new insights on the contrasting influences of regional and local variables, and a broader-scale perspective, on significance of EC/ENT exceedances, bacterial sources, and pathogen occurrence.


Subject(s)
Lakes/microbiology , Water Quality , Animals , Bacteroides/genetics , Bacteroides/isolation & purification , Biomarkers/analysis , Campylobacter jejuni/genetics , Campylobacter jejuni/isolation & purification , Campylobacter jejuni/pathogenicity , Enterococcus/genetics , Enterococcus/isolation & purification , Escherichia coli/genetics , Escherichia coli/isolation & purification , Feces/microbiology , Great Lakes Region , Humans , Methicillin-Resistant Staphylococcus aureus/genetics , Methicillin-Resistant Staphylococcus aureus/isolation & purification , Recreation , Ruminants/microbiology , Salmonella/genetics , Salmonella/isolation & purification , Salmonella/pathogenicity , Shiga-Toxigenic Escherichia coli/genetics , Shiga-Toxigenic Escherichia coli/isolation & purification , Shiga-Toxigenic Escherichia coli/pathogenicity , Water Microbiology
15.
Appl Environ Microbiol ; 79(5): 1676-88, 2013 Mar.
Article in English | MEDLINE | ID: mdl-23291550

ABSTRACT

Predictive models, based on environmental and water quality variables, have been used to improve the timeliness and accuracy of recreational water quality assessments, but their effectiveness has not been studied in inland waters. Sampling at eight inland recreational lakes in Ohio was done in order to investigate using predictive models for Escherichia coli and to understand the links between E. coli concentrations, predictive variables, and pathogens. Based upon results from 21 beach sites, models were developed for 13 sites, and the most predictive variables were rainfall, wind direction and speed, turbidity, and water temperature. Models were not developed at sites where the E. coli standard was seldom exceeded. Models were validated at nine sites during an independent year. At three sites, the model resulted in increased correct responses, sensitivities, and specificities compared to use of the previous day's E. coli concentration (the current method). Drought conditions during the validation year precluded being able to adequately assess model performance at most of the other sites. Cryptosporidium, adenovirus, eaeA (E. coli), ipaH (Shigella), and spvC (Salmonella) were found in at least 20% of samples collected for pathogens at five sites. The presence or absence of the three bacterial genes was related to some of the model variables but was not consistently related to E. coli concentrations. Predictive models were not effective at all inland lake sites; however, their use at two lakes with high swimmer densities will provide better estimates of public health risk than current methods and will be a valuable resource for beach managers and the public.


Subject(s)
Bacterial Load , Escherichia coli/isolation & purification , Fresh Water/microbiology , Adenoviridae/isolation & purification , Climate , Cryptosporidium/isolation & purification , Lakes , Models, Statistical , Ohio , Salmonella/isolation & purification , Sensitivity and Specificity , Shigella/isolation & purification
16.
Oecologia ; 171(1): 295-307, 2013 Jan.
Article in English | MEDLINE | ID: mdl-22791131

ABSTRACT

Predation can disproportionately affect endangered prey populations when generalist predators are numerically linked to more abundant primary prey. Apparent competition, the term for this phenomenon, has been increasingly implicated in the declines of endangered prey populations. We examined the potential for apparent competition to limit the recovery of Sierra Nevada bighorn sheep (Ovis canadensis sierrae), an endangered subspecies under the US Endangered Species Act. Using a combination of location, demographic, and habitat data, we assessed whether cougar (Puma concolor) predation on endangered bighorn sheep was a consequence of their winter range overlap with abundant mule deer (Odocoileus hemionus). Consistent with the apparent competition hypothesis, bighorn sheep populations with higher spatial overlap with deer exhibited higher rates of cougar predation which had additive effects on adult survival. Bighorn sheep killed by cougars were primarily located within deer winter ranges, even though those areas constituted only a portion of the bighorn sheep winter ranges. We suspect that variation in sympatry between bighorn sheep and deer populations was largely driven by differences in habitat selection among bighorn sheep herds. Indeed, bighorn sheep herds that experienced the highest rates of predation and the greatest spatial overlap with deer also exhibited the strongest selection for low elevation habitat. Although predator-mediated apparent competition may limit some populations of bighorn sheep, it is not the primary factor limiting all populations, suggesting that the dynamics of different herds are highly idiosyncratic. Management plans for endangered species should consider the spatial distributions of key competitors and predators to reduce the potential for apparent competition to hijack conservation success.


Subject(s)
Endangered Species , Food Chain , Puma , Sheep, Bighorn , Animals , Conservation of Natural Resources , Population Dynamics , Territoriality , United States
17.
Conserv Biol ; 25(6): 1240-1249, 2011 Dec.
Article in English | MEDLINE | ID: mdl-22070275

ABSTRACT

Evidence of inbreeding depression is commonly detected from the fitness traits of animals, yet its effects on population growth rates of endangered species are rarely assessed. We examined whether inbreeding depression was affecting Sierra Nevada bighorn sheep (Ovis canadensis sierrae), a subspecies listed as endangered under the U.S. Endangered Species Act. Our objectives were to characterize genetic variation in this subspecies; test whether inbreeding depression affects bighorn sheep vital rates (adult survival and female fecundity); evaluate whether inbreeding depression may limit subspecies recovery; and examine the potential for genetic management to increase population growth rates. Genetic variation in 4 populations of Sierra Nevada bighorn sheep was among the lowest reported for any wild bighorn sheep population, and our results suggest that inbreeding depression has reduced adult female fecundity. Despite this population sizes and growth rates predicted from matrix-based projection models demonstrated that inbreeding depression would not substantially inhibit the recovery of Sierra Nevada bighorn sheep populations in the next approximately 8 bighorn sheep generations (48 years). Furthermore, simulations of genetic rescue within the subspecies did not suggest that such activities would appreciably increase population sizes or growth rates during the period we modeled (10 bighorn sheep generations, 60 years). Only simulations that augmented the Mono Basin population with genetic variation from other subspecies, which is not currently a management option, predicted significant increases in population size. Although we recommend that recovery activities should minimize future losses of genetic variation, genetic effects within these endangered populations-either negative (inbreeding depression) or positive (within subspecies genetic rescue)-appear unlikely to dramatically compromise or stimulate short-term conservation efforts. The distinction between detecting the effects of inbreeding depression on a component vital rate (e.g., fecundity) and the effects of inbreeding depression on population growth underscores the importance of quantifying inbreeding costs relative to population dynamics to effectively manage endangered populations.


Resumen: La evidencia de la depresión por endogamia comúnmente es detectada a partir de atributos de la adaptabilidad de animales, sin embargo sus efectos sobre las tasas de crecimiento poblacional raramente son evaluados. Examinamos si la depresión por endogamia estaba afectando a Ovis canadensis sierrae, una subespecie enlistada como en peligro en el Acta de Especies en Peligro de E.U.A. Nuestros objetivos fueron caracterizar la variación genética de esta subespecie; probar si la depresión por endogamia afecta las tasas vitales (supervivencia de adultos y fecundidad de hembras); evaluar si la depresión por endogamia puede limitar la recuperación dela subespecie y examinar el potencial para el manejo genético para incrementar las tasas de crecimiento poblacional. La variación genética en 4 subpoblaciones O. c. sierrae fue la más baja entre las reportadas para cualquier otra población silvestre de O. c. sierrae y nuestros resultados sugieren que la depresión por endogamia ha reducido la fecundidad de hembras adultas. Sin embargo, los tamaños poblacionales y tasas de crecimiento predichos por modelos de proyección matriciales demostraron que la depresión por endogamia no inhibiría sustancialmente la recuperación de O. c. sierrae en las próximas 8 generaciones (48 años). Más aun, simulaciones del rescate genético no sugirieron que tales actividades incrementarían los tamaños poblacionales o tasas de crecimiento durante el período modelado (10 generaciones, 60 años). Solo las simulaciones que aumentaron la población de Mono Basin con variación genética de otras subespecies, lo cual no es una opción de manejo actual, predijeron incrementos significativos en el tamaño poblacional. Aunque recomendamos que las actividades de recuperación deberían minimizar pérdidas futuras en la variación genética, parece poco probable que los efectos genéticos en estas poblaciones en peligro-ya sea negativas (depresión por endogamia) o positivas (rescate genético de la subespecie)-comprometan o estimulen dramáticamente los esfuerzos de conservación a corto plazo. La distinción entre la detección de los efectos de la depresión por endogamia sobre una tasa vital componente (e.g., fecundidad) y los efectos de la depresión por endogamia sobre el crecimiento poblacional resalta la importancia de cuantificar, mediante datos recolectados en campo, los costos de la endogamia en relación con la dinámica poblacional para el manejo efectivo de poblaciones en peligro.


Subject(s)
Endangered Species , Inbreeding , Sheep/physiology , Animals , Conservation of Natural Resources , Female , Fertility , Genetic Variation , Heterozygote , Male , Microsatellite Repeats , Models, Genetic , Nevada , Population Density , Population Dynamics , Sexual Behavior, Animal , Sheep/genetics
18.
Ecol Appl ; 20(6): 1753-65, 2010 Sep.
Article in English | MEDLINE | ID: mdl-20945773

ABSTRACT

To develop effective management strategies for the recovery of threatened and endangered species, it is critical to identify those vital rates (survival and reproductive parameters) responsible for poor population performance and those whose increase will most efficiently change a population's trajectory. In actual application, however, approaches identifying key vital rates are often limited by inadequate demographic data, by unrealistic assumptions of asymptotic population dynamics, and of equal, infinitesimal changes in mean vital rates. We evaluated the consequences of these limitations in an analysis of vital rates most important in the dynamics of federally endangered Sierra Nevada bighorn sheep (Ovis canadensis sierrae). Based on data collected from 1980 to 2007, we estimated vital rates in three isolated populations, accounting for sampling error, variance, and covariance. We used analytical sensitivity analysis, life-stage simulation analysis, and a novel non-asymptotic simulation approach to (1) identify vital rates that should be targeted for subspecies recovery; (2) assess vital rate patterns of endangered bighorn sheep relative to other ungulate populations; (3) evaluate the performance of asymptotic vs. non-asymptotic models for meeting short-term management objectives; and (4) simulate management scenarios for boosting bighorn sheep population growth rates. We found wide spatial and temporal variation in bighorn sheep vital rates, causing rates to vary in their importance to different populations. As a result, Sierra Nevada bighorn sheep exhibited population-specific dynamics that did not follow theoretical expectations or those observed in other ungulates. Our study suggests that vital rate inferences from large, increasing, or healthy populations may not be applicable to those that are small, declining, or endangered. We also found that, while asymptotic approaches were generally applicable to bighorn sheep conservation planning; our non-asymptotic population models yielded unexpected results of importance to managers. Finally, extreme differences in the dynamics of individual bighorn sheep populations imply that effective management strategies for endangered species recovery may often need to be population-specific.


Subject(s)
Conservation of Natural Resources , Sheep, Bighorn/physiology , Animals , California , Female , Longevity , Male , Models, Biological , Population Dynamics , Reproduction , Time Factors
19.
J Wildl Dis ; 43(1): 61-74, 2007 Jan.
Article in English | MEDLINE | ID: mdl-17347394

ABSTRACT

Male tule elk (Cervus elaphus nannodes) are susceptible to high rates of antler breakage in Owens Valley, California. We hypothesized that a mineral deficiency in the diet predisposed male elk to antler breakage. We analyzed elk antler, liver, and forage samples to identify mineral imbalances. We compared the mineral content of livers and antlers from elk in Owens Valley to samples taken from tule elk at Grizzly Island Wildlife Area, a population experiencing normal rates (<5%) of antler breakage. Antler and liver samples were collected from 1989 to 1993, and in 2002, and were tested for calcium (Ca), copper (Cu), iron (Fe), magnesium (Mg), manganese (Mn), molybdenum (Mo), phosphorus (P), sulfur (S), and zinc (Zn). Mineral levels from antler and liver samples were compared to reference values established for elk and deer. We also compared the mineral content of elk forage in Owens Valley, collected in 2002-03, to dietary reference values established for cattle. In antlers, Ca, Fe, and Mg levels were higher in Owens Valley elk than in Grizzly Island elk, although all mineral levels were lower than reference values established for deer antlers. In liver samples, Cu levels from elk in Owens Valley were lower than those from Grizzly Island and lower than minimum reference values; liver Ca and Mo levels were higher in elk from Owens Valley than in those from Grizzly Island. Compared to reference values, elk forage in Owens Valley had high levels of Ca and Mo, and low levels of Cu, P, and Zn. Mineral analyses from antlers, livers, and forage suggest that tule elk in the Owens Valley are Cu and/or P deficient. High levels of Mo and Ca may exacerbate Cu and P deficiencies, respectively. Bone fragility is a symptom of both deficiencies, and an imbalance in Cu, P, or a combination of both, may predispose male tule elk in the Owens Valley to antler breakage.


Subject(s)
Antlers/chemistry , Copper/deficiency , Deer , Minerals/analysis , Phosphorus/deficiency , Animals , Animals, Wild , Antlers/pathology , Calcium/analysis , Calcium/deficiency , California , Copper/analysis , Iron/analysis , Iron Deficiencies , Liver/chemistry , Magnesium/analysis , Male , Molybdenum/analysis , Molybdenum/deficiency , Phosphorus/analysis , Reference Values
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