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1.
Food Chem ; 457: 140486, 2024 Jul 19.
Article in English | MEDLINE | ID: mdl-39032478

ABSTRACT

A gold nanogap substrate was used to measure the thiram and carbaryl residues in various fruit juices using surface-enhanced Raman scattering (SERS). The gold nanogap substrates can detect carbaryl and thiram with limits of detection of 0.13 ppb (0.13 µgkg-1) and 0.22 ppb (0.22 µgkg-1). Raw SERS data were first preprocessed to reduce noise and undesirable effects and, were later used for model creation, implementing classification, and regression analysis techniques. The partial least-squares regression models achieved the highest prediction correlation coefficient (R2) of 0.99 and the lowest root mean square of prediction value below 0.62 ppb for both pesticide-infected juice samples. Furthermore, to differentiate between juice samples contaminated by both pesticides and control (pesticide-free), logistic-regression classification models were produced and achieved the highest classification accuracies of 100% and 99% for contaminated juice containing thiram and 100% accurate results for contaminated juice containing carbaryl. This indicates that the gold nanogap surface has significant potential for achieving high sensitivity in detecting trace contaminants in food samples.

2.
Sci Rep ; 14(1): 12952, 2024 06 05.
Article in English | MEDLINE | ID: mdl-38839775

ABSTRACT

To date, degraded mangrove ecosystem restoration accomplished worldwide primarily aligns towards rehabilitation with monotypic plantations, while ecological restoration principles are rarely followed in these interventions. However, researchers admit that most of these initiatives' success rate is not appreciable often. An integrative framework of ecological restoration for degraded mangroves where site-specific observations could be scientifically rationalized, with co-located reference pristine mangroves as the target ecosystem to achieve is currently distinctively lacking. Through this experimental scale study, we studied the suitability of site-specific strategies to ecologically restore degraded mangrove patches vis-à-vis the conventional mono-species plantations in a highly vulnerable mangrove ecosystem in Indian Sundarbans. This comprehensive restoration framework was trialed in small discrete degraded mangrove patches spanning ~ 65 ha. Site-specific key restoration components applied are statistically validated through RDA analyses and Bayesian t-tests. 25 quantifiable metrics evaluate the restoration success of a ~ 3 ha degraded mangrove patch with Ridgeline distribution, Kolmogorov-Smirnov (K-S) tests, and Mahalanobis Distance (D2) measure to prove the site's near-equivalence to pristine reference in multiple ecosystem attributes. This restoration intervention irrevocably establishes the greater potential of this framework in the recovery of ecosystem functions and self-sustenance compared to that of predominant monoculture practices for vulnerable mangroves.


Subject(s)
Conservation of Natural Resources , Wetlands , India , Conservation of Natural Resources/methods , Ecosystem , Environmental Restoration and Remediation/methods , Pilot Projects , Bayes Theorem
3.
Data Brief ; 55: 110563, 2024 Aug.
Article in English | MEDLINE | ID: mdl-38911138

ABSTRACT

Dryingfish is a simple and economical way to process the catch. It creates a profitable business for coastal communities by providing a market for their catches, even during periods of abundance. It's a traditional method to preserve fish, especially valuable in regions where fresh fish isn't readily available or affordable throughout the year. This dataset provides a rich resource of 8290 images specifically designed for machine learning applications. It focuses on the five most popular types of dried seafood in India: prawns (shrimp), small anchovies (tingali), golden anchovies (mandeli), mackerel (bangada), and Bombay duck (bombil). To ensure high-quality data for machine learning applications for Identification and classification of different dried fish varieties, the dataset features a diverse set of images in singles and in bulk for each category. The dataset utilizes standardized lighting, background, and object pose for optimal machine learning performance. This rich dataset empowers researchers and data scientists to leverage machine learning for various applications in the Indian dried fish industry.Overall, the Dried Fish Dataset for Indian Seafood aims to leverage machine learning to improve the standardization, quality control, safety, and efficiency of the Indian dried fish industry.

4.
Curr Res Food Sci ; 8: 100726, 2024.
Article in English | MEDLINE | ID: mdl-38590692

ABSTRACT

This study reported an application of Au nanogap substrates for surface-enhanced Raman scattering (SERS) measurements to quantitatively analyze melamine and its derivative products at trace levels in pet liquid food (milk) combined with a waveband selection approach, namely variable importance in projection (VIP). Six different concentrations of melamine, cyanuric acid, and melamine combined with cyanuric acid were created, and SERS spectra were acquired from 550 to 1620cm-1. Detection was possible up to 200 pM for melamine-contaminated samples, and 400 pM concentration detection for other two groups. The VIP-PLSR models obtained correlation coefficient (R2) values of 0.997, 0.985, and 0.981, with root mean square error of prediction (RMSEP) values of 18.492 pM, 19.777 pM, and 15.124 pM for prediction datasets. Additionally, partial least square discriminant analysis (PLS-DA) was used to classify both pure and different concentrations of spiked samples. The results showed that the maximum classification accuracy for melamine was 100%, for cyanuric acid it was 96%, and for melamine coupled with cyanuric acid it was 95%. The results obtained clearly demonstrated that the Au nanogap substrate offers low-concentration, rapid, and efficient detection of hazardous additive chemicals in pet consuming liquid food.

5.
Zootaxa ; 5420(1): 1-121, 2024 Mar 11.
Article in English | MEDLINE | ID: mdl-38480306

ABSTRACT

We present an annotated catalogue of the Lepidoptera family Gelechiidae of India, comprising 351 species in 80 genera, encompassing seven subfamilies. The Indian fauna represents 7.47% of global gelechiid species diversity (i.e., 4,700 species in 500 genera). Among the seven subfamilies, Dichomeridinae is the best represented (122 species in four genera), followed by Gelechiinae (76 species in 38 genera), Anacampsinae (70 species in 16 genera), Thiotrichinae (49 species in five genera), Anomologinae (26 species in nine genera), Apatetrinae (seven species in seven genera), and Physoptilinae(single species). Information on type locality, type repository, synonyms, geographical distribution, hosts, natural enemies, and references to illustrations are provided. We also reviewed the history of descriptive work on the Gelechiidae of India, and resolved ambiguities regarding the current status of some species.


Subject(s)
Lepidoptera , Moths , Animals , Animal Distribution
6.
Molecules ; 28(18)2023 Sep 05.
Article in English | MEDLINE | ID: mdl-37764213

ABSTRACT

Antibody engineering has developed into a wide-reaching field, impacting a multitude of industries, most notably healthcare and diagnostics. The seminal work on developing the first monoclonal antibody four decades ago has witnessed exponential growth in the last 10-15 years, where regulators have approved monoclonal antibodies as therapeutics and for several diagnostic applications, including the remarkable attention it garnered during the pandemic. In recent years, antibodies have become the fastest-growing class of biological drugs approved for the treatment of a wide range of diseases, from cancer to autoimmune conditions. This review discusses the field of therapeutic antibodies as it stands today. It summarizes and outlines the clinical relevance and application of therapeutic antibodies in treating a landscape of diseases in different disciplines of medicine. It discusses the nomenclature, various approaches to antibody therapies, and the evolution of antibody therapeutics. It also discusses the risk profile and adverse immune reactions associated with the antibodies and sheds light on future applications and perspectives in antibody drug discovery.


Subject(s)
Autoimmune Diseases , Biological Products , Medicine , Humans , Antibodies, Monoclonal/therapeutic use , Autoimmune Diseases/drug therapy , Clinical Relevance
7.
Open Life Sci ; 18(1): 20220665, 2023.
Article in English | MEDLINE | ID: mdl-37589001

ABSTRACT

In accordance with the inability of various hair artefacts subjected to dermoscopic medical images, undergoing illumination challenges that include chest-Xray featuring conditions of imaging acquisi-tion situations built with clinical segmentation. The study proposed a novel deep-convolutional neural network (CNN)-integrated methodology for applying medical image segmentation upon chest-Xray and dermoscopic clinical images. The study develops a novel technique of segmenting medical images merged with CNNs with an architectural comparison that incorporates neural networks of U-net and fully convolutional networks (FCN) schemas with loss functions associated with Jaccard distance and Binary-cross entropy under optimised stochastic gradient descent + Nesterov practices. Digital image over clinical approach significantly built the diagnosis and determination of the best treatment for a patient's condition. Even though medical digital images are subjected to varied components clarified with the effect of noise, quality, disturbance, and precision depending on the enhanced version of images segmented with the optimised process. Ultimately, the threshold technique has been employed for the output reached under the pre- and post-processing stages to contrast the image technically being developed. The data source applied is well-known in PH2 Database for Melanoma lesion segmentation and chest X-ray images since it has variations in hair artefacts and illumination. Experiment outcomes outperform other U-net and FCN architectures of CNNs. The predictions produced from the model on test images were post-processed using the threshold technique to remove the blurry boundaries around the predicted lesions. Experimental results proved that the present model has better efficiency than the existing one, such as U-net and FCN, based on the image segmented in terms of sensitivity = 0.9913, accuracy = 0.9883, and dice coefficient = 0.0246.

8.
J Family Med Prim Care ; 12(5): 986-989, 2023 May.
Article in English | MEDLINE | ID: mdl-37448919

ABSTRACT

Background: Delirium is an acute confusional state characterized by changes in the mental status, level of consciousness, impaired cognition, and inattention. It can develop within hours or days. Cortisol release from the hypothalamic-pituitary-adrenal axis (HPA) is vital for the host survival in stress. Biomarkers are used as an indicator of pathogenic processes or to assess the responses to a therapeutic intervention. To improve delirium recognition and care, investigators have identified possible biomarkers that may help in diagnosing individuals with delirium, assessing the severity of delirium. Cortisol has been suggested as biomarker for the diagnosis of delirium. Aims and Objectives: To evaluate and compare levels of serum cortisol in patients with alcohol withdrawal delirium with delirium due to other disorders. Materials and Methods: It was a cross-sectional prospective observational study. A total of 30 patients in Group A and 32 in Group B were included. The participants were evaluated based on delirium rating scale (DRS). Results: It was seen that in alcohol withdrawal delirium group, there was significant positive correlation between DRS score and serum cortisol level, i.e., with increase in DRS score, there was increase in serum cortisol levels and vice versa. Conclusion: Serum cortisol levels are associated and directly correlate with the occurrence and severity of delirium. Further studies are needed to elucidate the implications of this association for diagnosis and treatment.

9.
Zootaxa ; 5315(2): 150-160, 2023 Jul 07.
Article in English | MEDLINE | ID: mdl-37518611

ABSTRACT

The Miltochrista hollowai (Kirti & Gill, 2009) and M. curvifascia (Hampson, 1891) species-groups are reviewed, and two new species belonging to the M. hollowai species-group i.e., Miltochrista madathumala sp. nov. and M. kumarkaustubhi sp. nov. are described from South India. The female of M. paraarcuata is illustrated and diagnosed for the first time. Illustrations of adults and genitalia as well as diagnoses are provided for all the species considered.


Subject(s)
Moths , Animals , Female , India , Moths/anatomy & histology , Moths/classification , Male , Species Specificity , Genitalia/anatomy & histology
10.
Sensors (Basel) ; 23(11)2023 May 24.
Article in English | MEDLINE | ID: mdl-37299748

ABSTRACT

Melamine and its derivative, cyanuric acid, are occasionally added to pet meals because of their nitrogen-rich qualities, leading to the development of several health-related issues. A nondestructive sensing technique that offers effective detection must be developed to address this problem. In conjunction with machine learning and deep learning technique, Fourier transform infrared (FT-IR) spectroscopy was employed in this investigation for the nondestructive quantitative measurement of eight different concentrations of melamine and cyanuric acid added to pet food. The effectiveness of the one-dimensional convolutional neural network (1D CNN) technique was compared with that of partial least squares regression (PLSR), principal component regression (PCR), and a net analyte signal (NAS)-based methodology, called hybrid linear analysis (HLA/GO). The 1D CNN model developed for the FT-IR spectra attained correlation coefficients of 0.995 and 0.994 and root mean square error of prediction values of 0.090% and 0.110% for the prediction datasets on the melamine- and cyanuric acid-contaminated pet food samples, respectively, which were superior to those of the PLSR and PCR models. Therefore, when FT-IR spectroscopy is employed in conjunction with a 1D CNN model, it serves as a potentially rapid and nondestructive method for identifying toxic chemicals added to pet food.


Subject(s)
Deep Learning , Spectroscopy, Fourier Transform Infrared , Food Contamination/analysis
11.
Zootaxa ; 5228(5): 547-583, 2023 Jan 17.
Article in English | MEDLINE | ID: mdl-37044639

ABSTRACT

We catalogue 100 species (including nominotypic subspecies) and five subspecies in 35 genera of Lasiocampinae, Lasiocampidae from India. This represents 5% of the 1,952 species of Global Lasiocampidae. Information on types (locality and depository), synonymy, diversity and distribution in different biogeographic zones of India alongwith global records, contribution of various authors on Indian Lasiocampidae is provided. Apart from seven doubtful records, clarifications are given as remarks wherever needed. Additionally, Streblote alpherakyi (Christoph, 1885) and Odontocraspis collieri Zolotuhin & Witt, 2000a are reported for the first time from India.


Subject(s)
Lepidoptera , Animals
12.
Zootaxa ; 5263(1): 148-150, 2023 04 04.
Article in English | MEDLINE | ID: mdl-37044992

Subject(s)
Lepidoptera , Moths , Animals , India
13.
Spectrochim Acta A Mol Biomol Spectrosc ; 297: 122734, 2023 Sep 05.
Article in English | MEDLINE | ID: mdl-37080052

ABSTRACT

Conventional spectroscopic methods like IR, and Raman are not very effective at detecting low levels of pesticides or harmful chemicals in food matrices. A quick, highly accurate approach that can identify pesticides present in different food products at lower levels must be developed in order to address this problem and ensure food safety. In this study, a highly sensitive and uniform wafer-scale Au nanogap surface-enhanced Raman spectroscopy (SERS) substrate was used for the quantitative analysis of carbaryl pesticide levels in standard solution, mango juice, and milk samples using chemometrics. Carbaryl was detected up to 3 ppb concentration levels for all three group of samples. However, due to the higher sensitivity, uniformity, and enhancement factors of the SERS substrate used in this investigation, the limit of detection (LOD) values for the standard solution, mango juice, and milk were 0.37 ppb, 0.57 ppb, and 0.15 ppb at 1380 cm-1, 1380 cm-1, and 1364 cm-1 wavenumber ranges. In order to predict different carbaryl concentrations (1, 2, 3, 4, and 5 ppb), the variable importance in projection (VIP) method combined with partial least squares regression (PLSR) and attained the coefficient of determination (R2) values of 0.994, 0.989, and 0.978 along with minimum root mean square error (RMSE) values of 0.112, 0.190, and 0.278 ppb for the prediction datasets. Furthermore, PLS-DA was able to distinguish between pure and adulterated samples with the highest classification accuracy of 100 % for a standard solution, and mango juice and 94.4 % for milk samples. Considering this, we can conclude that the SERS Au Nanogap substrate can rapidly and effectively detect carbaryl pesticides quantitatively and qualitatively in mango juice and milk.


Subject(s)
Pesticides , Animals , Pesticides/analysis , Carbaryl/analysis , Milk/chemistry , Spectrum Analysis, Raman/methods , Food Safety , Gold/chemistry
14.
Zootaxa ; 5330(3): 301-348, 2023 Aug 16.
Article in English | MEDLINE | ID: mdl-38221133

ABSTRACT

We catalogue 165 species in 81 genera representing six families of Cossoidea present in India. Sesiidae is the most dominant family in India, consisting 89 species in 38 genera, followed by Cossidae with 47 species in 28 genera, Brachodidae with 13 species in six genera, Metarbelidae with 12 species in seven genera, Ratardidae with three species in single genus and the Dudgeoneidae is known by single species. A comprehensive data on the species diversity of all the families of Indian Cossoidea, with information on type species, type locality, synonyms, clarifications, and distribution in different parts of India and Globe, are provided.


Subject(s)
Lepidoptera , Animals , India
15.
Front Plant Sci ; 13: 982247, 2022.
Article in English | MEDLINE | ID: mdl-36119609

ABSTRACT

Quantifying the phenolic compounds in plants is essential for maintaining the beneficial effects of plants on human health. Existing measurement methods are destructive and/or time consuming. To overcome these issues, research was conducted to develop a non-destructive and rapid measurement of phenolic compounds using hyperspectral imaging (HSI) and machine learning. In this study, the Arabidopsis was used since it is a model plant. They were grown in controlled and various stress conditions (LED lights and drought). Images were captured using HSI in the range of 400-1,000 nm (VIS/NIR) and 900-2,500 nm (SWIR). Initially, the plant region was segmented, and the spectra were extracted from the segmented region. These spectra were synchronized with plants' total phenolic content reference value, which was obtained from high-performance liquid chromatography (HPLC). The partial least square regression (PLSR) model was applied for total phenolic compound prediction. The best prediction values were achieved with SWIR spectra in comparison with VIS/NIR. Hence, SWIR spectra were further used. Spectral dimensionality reduction was performed based on discrete cosine transform (DCT) coefficients and the prediction was performed. The results were better than that of obtained with original spectra. The proposed model performance yielded R 2-values of 0.97 and 0.96 for calibration and validation, respectively. The lowest standard errors of predictions (SEP) were 0.05 and 0.07 mg/g. The proposed model out-performed different state-of-the-art methods. These demonstrate the efficiency of the model in quantifying the total phenolic compounds that are present in plants and opens a way to develop a rapid measurement system.

16.
Plants (Basel) ; 11(7)2022 Mar 22.
Article in English | MEDLINE | ID: mdl-35406816

ABSTRACT

The increasing interest in plant phenolic compounds in the past few years has become necessary because of their several important physicochemical properties. Thus, their identification through non-destructive methods has become crucial. This study carried out comparative non-destructive measurements of Arabidopsis thaliana leaf powder sample phenolic compounds using Fourier-transform infrared and near-infrared spectroscopic techniques under six distinct stress conditions. The prediction analysis of 600 leaf powder samples under different stress conditions (LED lights and drought) was performed using PLSR, PCR, and NAS-based HLA/GO regression analysis methods. The results obtained through FT-NIR spectroscopy yielded the highest correlation coefficient (Rp2) value of 0.999, with a minimum error (RMSEP) value of 0.003 mg/g, based on the PLSR model using the MSC preprocessing method, which was slightly better than the correlation coefficient (Rp2) value of 0.980 with an error (RMSEP) value of 0.055 mg/g for FT-IR spectroscopy. Additionally, beta coefficient plots present spectral differences and the identification of important spectral signatures sensitive to the phenolic compounds in the measured powdered samples. Thus, the obtained results demonstrated that FT-NIR spectroscopy combined with partial least squares regression (PLSR) and suitable preprocessing method has a solid potential for non-destructively predicting phenolic compounds in Arabidopsis thaliana leaf powder samples.

17.
Transl Vis Sci Technol ; 11(3): 3, 2022 Mar 02.
Article in English | MEDLINE | ID: mdl-35254423

ABSTRACT

PURPOSE: Complex two-dimensional (2D) patterns of hyperfluorescent short-wave fundus autofluorescence (FAF) at the border of geographic atrophy (GA) can predict its expansion in patients with late non-exudative "dry" AMD. However, preclinical models do not phenocopy this important feature of disease. We sought to describe the spatiotemporal changes in hyperfluorescent FAF patterns that occur following acute oxidative stress, potentially in association with GA expansion. METHODS: Sprague Dawley rats (n = 54) received systemic sodium iodate (25-45 mg/kg, n = 90 eyes) or saline (n = 18 eyes) and underwent serial full fundus imaging by confocal scanning laser ophthalmoscopy, including blue FAF and delayed near-infrared analysis. Composite images of the fundus were assembled, and the 2D patterns were described qualitatively and quantitatively. A subset of eyes underwent tissue analysis, and four underwent optical coherence tomography (OCT) imaging. RESULTS: Reproducibly changing, complex patterns of hyperfluorescent FAF emerge at the borders of toxin-induced damage; however, in the absence of GA expansion, they percolate inward within the region of retinal pigment epithelium loss, evolving, maturing, and senescing in situ over time. Unexpectedly, the late FAF patterns most closely resemble the diffuse tricking form of clinical disease. A five-stage classification system is presented. CONCLUSIONS: Longitudinal, full-fundus imaging of outer retinal atrophy in the rat eye identifies evolving, complex patterns of hyperfluorescent FAF that phenocopy aspects of disease. TRANSLATIONAL RELEVANCE: This work provides a novel tool to assess hyperfluorescent FAF in association with progressive retinal atrophy, a therapeutic target in late AMD.


Subject(s)
Geographic Atrophy , Retinal Degeneration , Animals , Atrophy , Fluorescein Angiography/methods , Geographic Atrophy/diagnostic imaging , Humans , Rats , Rats, Sprague-Dawley , Retinal Degeneration/diagnostic imaging , Tomography, Optical Coherence/methods
18.
Zootaxa ; 5197(1): 1-423, 2022 Oct 25.
Article in English | MEDLINE | ID: mdl-37045059

ABSTRACT

We catalogue 1,695 Indian Pyraloidea species in 509 genera. Of these, Pyralidae comprises 518 species in 182 genera, which represents 8.35% of the global Pyralidae diversity of 6,197 species. Crambidae are represented by 1,177 species in 327 genera, accounting for 11.29% of the global Crambidae diversity of 10,418 species. Botys medullalis Snellen, distributed in Indonesia, is reinstated to species status as Sciorista medullalis (Snellen), stat. rev., comb. nov. Sylepta [sic] picalis Hampson, 1903, syn. nov. is synonymised with Syllepte picalis Hampson, 1899. A replacement name Archernis polynesiae N. Singh & Mally, nom. nov. is proposed for Archernis fulvalis Hampson, 1913a, a junior homonym of Archernis fulvalis Hampson, 1899e. We review the chronology and quantity of species descriptions of Indian Pyraloidea by various authors. Summaries of all subfamilies of Pyralidae and Crambidae present in India provide information on adult and larval morphology, food plant associations, and diversity and distribution in major biogeographic zones of India.


Subject(s)
Lepidoptera , Moths , Animals , Larva
19.
Sensors (Basel) ; 21(23)2021 Nov 23.
Article in English | MEDLINE | ID: mdl-34883787

ABSTRACT

The human immune system is very complex. Understanding it traditionally required specialized knowledge and expertise along with years of study. However, in recent times, the introduction of technologies such as AIoMT (Artificial Intelligence of Medical Things), genetic intelligence algorithms, smart immunological methodologies, etc., has made this process easier. These technologies can observe relations and patterns that humans do and recognize patterns that are unobservable by humans. Furthermore, these technologies have also enabled us to understand better the different types of cells in the immune system, their structures, their importance, and their impact on our immunity, particularly in the case of debilitating diseases such as cancer. The undertaken study explores the AI methodologies currently in the field of immunology. The initial part of this study explains the integration of AI in healthcare and how it has changed the face of the medical industry. It also details the current applications of AI in the different healthcare domains and the key challenges faced when trying to integrate AI with healthcare, along with the recent developments and contributions in this field by other researchers. The core part of this study is focused on exploring the most common classifications of health diseases, immunology, and its key subdomains. The later part of the study presents a statistical analysis of the contributions in AI in the different domains of immunology and an in-depth review of the machine learning and deep learning methodologies and algorithms that can and have been applied in the field of immunology. We have also analyzed a list of machine learning and deep learning datasets about the different subdomains of immunology. Finally, in the end, the presented study discusses the future research directions in the field of AI in immunology and provides some possible solutions for the same.


Subject(s)
Artificial Intelligence , Machine Learning , Algorithms , Forecasting , Humans , Technology
20.
Zootaxa ; 4995(3): 551-564, 2021 Jul 01.
Article in English | MEDLINE | ID: mdl-34810551

ABSTRACT

The Miltochrista pudibunda (Snellen, 1880) species-group is reviewed. A new synonym is established: M. pudibunda = M. irregularis Rothschild, 1913, syn. nov. The species previously treated by authors (since Hampson (1900)) as M. pudibunda is described as new: M. berdepsebunda sp. nov. A lectotype female is designated for Miltochrista irregularis Rothschild, 1913. Adults together with male and female genitalia of all species of the group are illustrated, diagnoses are provided for each species.


Subject(s)
Moths , Animals , Female , Male
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