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1.
Front Microbiol ; 14: 1226877, 2023.
Article in English | MEDLINE | ID: mdl-37614595

ABSTRACT

Feline calicivirus (FCV) causes upper respiratory tract diseases and even death in cats, thereby acting as a great threat to feline animals. Currently, FCV prevention is mainly achieved through vaccination, but the effectiveness of vaccination is limited. In this study, 105 FCV strain VP1 sequences with clear backgrounds were downloaded from the NCBI and subjected to a maximum likelihood method for systematic evolutionary analysis. Based on the genetic analysis results, FCV-positive sera were prepared using SPF mice and Chinese field cats as target animals, followed by a cross-neutralization assay conducted on the different genotype strains and in vivo challenge tests were carried out to further verify with the strain with best cross-protection effect. The results revealed that FCV was mainly divided into two genotypes: GI and GII. The GI genotype strains are prevalent worldwide, but all GII genotype strains were isolated from Asia, indicating a clear geographical feature. This may form resistance to FCV prevention in Asia. The in vitro neutralization assay conducted using murine serum demonstrated that the cross-protection effect varied among strains. A strain with broad-spectrum neutralization properties, DL39, was screened. This strain could produce neutralizing titers (10 × 23.08-10 × 20.25) against all strains used in this study. The antibody titers against the GI strains were 10 × 23.08-10 × 20.5 and those against the GII strains were 10 × 20.75-10 × 20.25. Preliminary evidence suggested that the antibody titer of the DL39 strain against GI was higher than that against GII. Subsequent cross-neutralization assays with cat serum prepared with the DL39 strain and each strain simultaneously yielded results similar to those described above. In vivo challenge tests revealed that the DL39 strain-immunized cats outperformed the positive controls in all measures. The results of several trials demonstrated that strain DL39 can potentially be used as a vaccine strain. The study attempted to combine the genetic diversity and phylogenetic analysis of FCV with the discovery of potential vaccines, which is crucial for developing highly effective FCV vaccines.

2.
Materials (Basel) ; 16(15)2023 Jul 25.
Article in English | MEDLINE | ID: mdl-37569931

ABSTRACT

Changes in loading position have a significant impact on the stress field of each vulnerable area of an orthotropic steel deck (OSD). The arc opening area of the diaphragm and the connecting area between the U-rib and the diaphragm under the moving load are prone to fatigue cracking. By comparing the stress responses under different methods, the hot spot stress (HSS) method is used as the main stress extraction method in fatigue performance evaluation. The control stress of fatigue cracking was analyzed by comparing the direction of the principal stress field with the crack direction in this experiment. According to the stress amplitude deviation under the biaxial stress state, a set of methods for evaluating the effects of in-plane biaxial fatigue was developed. An improved luffing fatigue assessment S-N curve was applied to analyze the fatigue life of the diaphragm's arc opening area. The results show that when the moving load is exactly above the connection of the deck and the web of the U-rib on one side, it is in the most unfavorable position in the transverse direction, and the diaphragm is mainly under the in-plane stress state. The longitudinal range of the stress influence line of the arc opening is approximately twice the diaphragm spacing. Two to three stress cycles are caused by one fatigue load. Fatigue crack control stress is the principal stress tangential to the arc opening's edge in this area. The normal direction of the principal stress in the model test is roughly consistent with the crack initiation direction. The variation in the stress amplitude deviation in this area is caused by changes in the action position of the moving load. When the moving load is at a certain distance from the involved diaphragm, it is reduced to zero, implying that the in-plane fatigue effect is the greatest in this area.

3.
Front Microbiol ; 14: 1141101, 2023.
Article in English | MEDLINE | ID: mdl-37032894

ABSTRACT

Introduction: Reverse genetics has become an indispensable tool to gain insight into the pathogenesis of viruses and the development of vaccines. The yeast-based synthetic genomics platform has demonstrated the novel capabilities to genetically reconstruct different viruses. Methods: In this study, a transformation-associated recombination (TAR) system in yeast was used to rapidly rescue different strains of feline infectious peritonitis virus, which causes a deadly disease of cats for which there is no effective vaccine. Results and discussion: Using this system, the viruses could be rescued rapidly and stably without multiple cloning steps. Considering its speed and ease of manipulation in virus genome assembly, the reverse genetics system developed in this study will facilitate the research of the feline coronaviruses pathogenetic mechanism and the vaccine development.

4.
Infect Immun ; 91(1): e0019322, 2023 01 24.
Article in English | MEDLINE | ID: mdl-36541752

ABSTRACT

Pasteurella multocida primarily causes hemorrhagic septicemia and pneumonia in poultry and livestock. Identification of the relevant virulence factors is therefore essential for understanding its pathogenicity. Pmorf0222, encoding the PM0222 protein, is located on a specific prophage island of the pathogenic strain C48-1 of P. multocida. Its role in the pathogenesis of P. multocida infection is still unknown. The proinflammatory cytokine plays an important role in P. multocida infection; therefore, murine peritoneal exudate macrophages were treated with the purified recombinant PM0222, which induced the secretion of tumor necrosis factor alpha (TNF-α) and interleukin-1ß (IL-1ß) via the Toll-like receptor 1/2 (TLR1/2)-nuclear factor kappa B (NF-κB)/mitogen-activated protein kinase (MAPK) signaling and inflammasome activation. Additionally, the mutant strain and complemented strain were evaluated in the mouse model with P. multocida infection, and PM0222 was identified as a virulence factor, which was secreted by outer membrane vesicles of P. multocida. Further results revealed that Pmorf0222 affected the synthesis of the capsule, adhesion, serum sensitivity, and biofilm formation. Thus, we identified Pmorf0222 as a novel virulence factor in the C48-1 strain of P. multocida, explaining the high pathogenicity of this pathogenic strain.


Subject(s)
Pasteurella Infections , Pasteurella multocida , Mice , Animals , Pasteurella multocida/genetics , NF-kappa B/metabolism , Toll-Like Receptor 1 , Virulence Factors/genetics , Mitogen-Activated Protein Kinases/metabolism
5.
Comput Struct Biotechnol J ; 20: 4360-4368, 2022.
Article in English | MEDLINE | ID: mdl-36051871

ABSTRACT

The morphology of the cervical cell nucleus is the most important consideration for pathological cell identification. And a precise segmentation of the cervical cell nucleus determines the performance of the final classification for most traditional algorithms and even some deep learning-based algorithms. Many deep learning-based methods can accurately segment cervical cell nuclei but will cost lots of time, especially when dealing with the whole-slide image (WSI) of tens of thousands of cells. To address this challenge, we propose a dual-supervised sampling network structure, in which a supervised-down sampling module uses compressed images instead of original images for cell nucleus segmentation, and a boundary detection network is introduced to supervise the up-sampling process of the decoding layer for accurate segmentation. This strategy dramatically reduces the convolution calculation in image feature extraction and ensures segmentation accuracy. Experimental results on various cervical cell datasets demonstrate that compared with UNet, the inference speed of the proposed network is increased by 5 times without losing segmentation accuracy. The codes and datasets are available at https://github.com/ldrunning/DSSNet.

6.
Transbound Emerg Dis ; 69(6): 3300-3316, 2022 Nov.
Article in English | MEDLINE | ID: mdl-35964328

ABSTRACT

The number of parainfluenza virus 5 (PIV5) infection cases has increased worldwide over the past six decades; however, factors underlying this increase remain unclear. PIV5 has been emerging or re-emerging in humans and animal species. To date, no information is yet available regarding PIV5 infection in arthropod ticks. Here, we successfully isolated tick-derived PIV5 from the Ixodes persulcatus species designated as HLJ/Tick/2019 in Heilongjiang, China. Phylogenetic analysis revealed that the tick-derived PIV5 is closely related to subclade 2.2.6, which has become the dominant subtype prevalent in dogs, pigs and wildlife across China. Further experiments to understand the importance of this virus as an infectious vector revealed that a ferret animal model experimentally infected with Tick/HLJ/2019 via the oronasal and ocular inoculation routes developed moderate respiratory distress with pneumonia and neurologic tissue damage from inflammation for the first time. Further surveillance of PIV5 in vectors of viral transmission is necessary to enhance our knowledge of its ecology in reservoirs and facilitate the control of re-emerging diseases.


Subject(s)
Ixodes , Parainfluenza Virus 5 , Animals , Dogs , Humans , Ferrets , Ixodes/virology , Parainfluenza Virus 5/classification , Parainfluenza Virus 5/genetics , Parainfluenza Virus 5/isolation & purification , Phylogeny , Rubulavirus Infections/epidemiology , Rubulavirus Infections/pathology , Rubulavirus Infections/virology , Swine
7.
J Gen Virol ; 103(5)2022 05.
Article in English | MEDLINE | ID: mdl-35579608

ABSTRACT

The purification of virus particles is an essential process for the manufacture of vaccines. However, the application of different purification processes may affect the quality of the virus particles, such as structural integrity and homogeneity, which may further influence the infectivity and immunogenicity of the purified virus. In this study, we took Feline calicivirus (FCV), a common natural pathogen in cats belonging to Caliciviridae, as a research model. By using cryo-electron microscopy (cryo-EM), we incorporated the 3D classification process as a virus flexibility evaluation system. Cryo-EM images of virus particles resulting from different purification processes were compared at near-atomic resolution. The results indicated that molecular sieving purification will impact the stability of P-domains through increasing flexibility as determined by the evaluation system, which can be extended to assess the purification effect on the entire particle. This evaluation process can be further applied to all non-enveloped viruses.


Subject(s)
Caliciviridae Infections , Caliciviridae , Calicivirus, Feline , Cat Diseases , Viruses , Animals , Caliciviridae Infections/veterinary , Cats , Cryoelectron Microscopy/methods , Virion/chemistry
8.
Appl Microbiol Biotechnol ; 106(4): 1651-1661, 2022 Feb.
Article in English | MEDLINE | ID: mdl-35089398

ABSTRACT

Feline calicivirus (FCV) has a single-stranded, positive-sense RNA genome, and it is responsible for many infectious respiratory diseases in cats. In addition, more worryingly, highly virulent strains of FCV can cause high mortality in felines. Therefore, a rapid and reliable diagnosis tool plays an important role in controlling the outbreak of FCV. In this study, enzymatic recombinase amplification (ERA) assay combined with lateral flow dipstick (LFD) was developed for the detection of FCV, targeting a relatively conversed position of FCV-ORF1. The results showed that the optimal reaction condition was at 40 °C for 30 min. ERA-LFD method was highly sensitive with the detection limit as low as 3.2 TCID50 of FCV RNA per reaction. The specificity analysis demonstrated no cross-reactivity with feline parvovirus (FPV), feline herpesvirus (FHV) and feline infectious peritonitis virus (FIPV). ERA-LFD was highly repeatable and reproducible, with the intra-assay and inter-assay coefficients of variation for this method both less than 7%. The general test showed that all the recombinant plasmids with known mutant sites and FCV strains with different mutant sites stored in our laboratory were all detected by this method. Of the 23 samples, 14 samples were tested positive for FCV by ERA-LFD and RT-qPCR, respectively. In summary, ERA-LFD assay was a fast, accurate and convenient diagnosis tool for the detection of FCV. KEY POINTS: • The detection principle of ERA-LFD was introduced. • Almost all the currently known FCV strains can be detected. • ERA-LFD is easy to operate and can be used for field detection.


Subject(s)
Caliciviridae Infections , Calicivirus, Feline , Communicable Diseases , Animals , Caliciviridae Infections/diagnosis , Caliciviridae Infections/veterinary , Calicivirus, Feline/genetics , Cats , Real-Time Polymerase Chain Reaction , Recombinases
9.
J Neurosci Methods ; 370: 109476, 2022 Mar 15.
Article in English | MEDLINE | ID: mdl-35007653

ABSTRACT

BACKGROUND: Astrocytes are considered key players in neuroimmunopathological processes, and they play a certain role in neuroinflammation. Rodent primary astrocyte cultures are commonly used in the study of human neuroinflammation. However, gene sequence homologies are closer between humans and dogs than between humans and rodents. NEW METHOD: We established protocols to isolate astrocytes from the canine forebrain. Cerebral hemispheres of 3-4-week-old dogs were used. The isolation procedure included the use of the Neural Tissue Dissociation Kit P, demyelination by the magnetic bead method, and separation and preparation by differential adhesion. RESULTS: We found a 96% astrocyte purification rate after isolation by differential adhesion. Purified canine astrocytes increased the secretion of interleukin-1ß, interleukin-6, and tumor necrosis factor-alpha, and increased the expression of glial fibrillary acidic protein after lipopolysaccharide stimulation. We sequenced the transcriptome of the purified canine astrocytes and analyzed the differentially expressed genes among the rodent, human, and canine astrocytes. Transcriptome profiling and gene ontology analysis of the genes co-expressed in humans and canines indicate that human and canine astrocytes may be different from their rodent counterparts in terms of mediated interactions with metals. COMPARED WITH THE EXISTING METHODS: The cells prepared by our method allow for the rapid separation of astrocytes with a relatively small resource scheme. The method also retains the cell phenotype and has an in vitro culture lifetime of approximately 2-3 months. CONCLUSION: We established a method for preparing canine astrocytes with high purity, which can be used to study the biological function of astrocytes in vitro.


Subject(s)
Astrocytes , Cerebral Cortex , Animals , Astrocytes/metabolism , Cells, Cultured , Cerebral Cortex/metabolism , Dogs , Glial Fibrillary Acidic Protein/metabolism , Interleukin-6/genetics , Lipopolysaccharides/metabolism , Transcriptome
10.
Front Med (Lausanne) ; 8: 746307, 2021.
Article in English | MEDLINE | ID: mdl-34805215

ABSTRACT

Stain normalization often refers to transferring the color distribution to the target image and has been widely used in biomedical image analysis. The conventional stain normalization usually achieves through a pixel-by-pixel color mapping model, which depends on one reference image, and it is hard to achieve accurately the style transformation between image datasets. In principle, this difficulty can be well-solved by deep learning-based methods, whereas, its complicated structure results in low computational efficiency and artifacts in the style transformation, which has restricted the practical application. Here, we use distillation learning to reduce the complexity of deep learning methods and a fast and robust network called StainNet to learn the color mapping between the source image and the target image. StainNet can learn the color mapping relationship from a whole dataset and adjust the color value in a pixel-to-pixel manner. The pixel-to-pixel manner restricts the network size and avoids artifacts in the style transformation. The results on the cytopathology and histopathology datasets show that StainNet can achieve comparable performance to the deep learning-based methods. Computation results demonstrate StainNet is more than 40 times faster than StainGAN and can normalize a 100,000 × 100,000 whole slide image in 40 s.

11.
Neuroinformatics ; 19(2): 305-317, 2021 04.
Article in English | MEDLINE | ID: mdl-32844332

ABSTRACT

Recent technological advancements have facilitated the imaging of specific neuronal populations at the single-axon level across the mouse brain. However, the digital reconstruction of neurons from a large dataset requires months of manual effort using the currently available software. In this study, we develop an open-source software called GTree (global tree reconstruction system) to overcome the above-mentioned problem. GTree offers an error-screening system for the fast localization of submicron errors in densely packed neurites and along with long projections across the whole brain, thus achieving reconstruction close to the ground truth. Moreover, GTree integrates a series of our previous algorithms to significantly reduce manual interference and achieve high-level automation. When applied to an entire mouse brain dataset, GTree is shown to be five times faster than widely used commercial software. Finally, using GTree, we demonstrate the reconstruction of 35 long-projection neurons around one injection site of a mouse brain. GTree is also applicable to large datasets (10 TB or higher) from various light microscopes.


Subject(s)
Brain/diagnostic imaging , Imaging, Three-Dimensional/methods , Neurons , Software , Algorithms , Animals , Automation/methods , Brain/cytology , Brain/physiology , Male , Mice , Mice, Inbred C57BL , Microscopy/methods , Neurites/physiology , Neurons/physiology
12.
PLoS Pathog ; 16(10): e1008944, 2020 10.
Article in English | MEDLINE | ID: mdl-33075108

ABSTRACT

Feline calicivirus (FCV) belongs to the Caliciviridae, which comprises small RNA viruses of both medical and veterinary importance. Once infection has occurred, FCV can persist in the cat population, but the molecular mechanism of how it escapes the innate immune response is still unknown. In this study, we found FCV strain 2280 to be relatively resistant to treatment with IFN-ß. FCV 2280 infection inhibited IFN-induced activation of the ISRE (Interferon-stimulated response element) promoter and transcription of ISGs (Interferon-stimulated genes). The mechanistic analysis showed that the expression of IFNAR1, but not IFNAR2, was markedly reduced in FCV 2280-infected cells by inducing the degradation of IFNAR1 mRNA, which inhibited the phosphorylation of downstream adaptors. Further, overexpression of the FCV 2280 nonstructural protein p30, but not p30 of the attenuated strain F9, downregulated the expression of IFNAR1 mRNA. His-p30 fusion proteins were produced in Escherichia coli and purified, and an in vitro digestion assay was performed. The results showed that 2280 His-p30 could directly degrade IFNAR1 RNA but not IFNAR2 RNA. Moreover, the 5'UTR of IFNAR1 mRNA renders it directly susceptible to cleavage by 2280 p30. Next, we constructed two chimeric viruses: rFCV 2280-F9 p30 and rFCV F9-2280 p30. Compared to infection with the parental virus, rFCV 2280-F9 p30 infection displayed attenuated activities in reducing the level of IFNAR1 and inhibiting the phosphorylation of STAT1 and STAT2, whereas rFCV F9-2280 p30 displayed enhanced activities. Animal experiments showed that the virulence of rFCV 2280-F9 p30 infection was attenuated but that the virulence of rFCV F9-2280 p30 was increased compared to that of the parental viruses. Collectively, these data show that FCV 2280 p30 could directly and selectively degrade IFNAR1 mRNA, thus blocking the type I interferon-induced activation of the JAK-STAT signalling pathway, which may contribute to the pathogenesis of FCV infection.


Subject(s)
Antiviral Agents/pharmacology , Caliciviridae Infections/drug therapy , Calicivirus, Feline/pathogenicity , Immunity, Innate/drug effects , Interferon Type I/metabolism , Animals , Caliciviridae Infections/virology , Calicivirus, Feline/drug effects , Calicivirus, Feline/immunology , Cat Diseases/virology , Cats , Interferon Type I/immunology , Interferon-beta/genetics , Viruses/drug effects , Viruses/genetics
13.
Vet Microbiol ; 240: 108543, 2020 Jan.
Article in English | MEDLINE | ID: mdl-31902487

ABSTRACT

Since 2011, to control the spread of pseudorabies (PR), US7/US8/UL23-deleted recombinant PRV (rPRV) vaccines based on current variants have been developed. The vaccines can provide effective immune protection to pigs, but fur-bearing animals, such as dogs, foxes, and minks, are increasingly infected by PRV due to consuming contaminated raw meat or offal from immunized pigs. It is suspected that the attenuated PRV vaccine strain is not safe for these fur-bearing animals. To confirm this, we construct a US7/US8/UL23-deleted and a US7/US8/UL23/US3-deleted rPRV based on PRV GL isolated from fox using the CRISPR/Cas9 method. Growth kinetics in vitro and pathogenicity in dogs were compared between the wild type and both rPRVs. The results showed that the growth kinetics of wild-type PRV and US7/US8/UL23-deleted rPRV were faster than those of US7/US8/UL23/US3-deleted recombinant PRV from 24 h to 48 h post infection. Moreover, PRV GL- and rPRVdelUS7/US8/UL23-infected cells formed cell-cell fusion, but the rPRVdelUS7/US8/UL23/US3-infected cells did not. Dogs challenged with wild-type PRV or US7/US8/UL23-deleted rPRV showed obvious nervous symptoms, and all the dogs died, but the group challenged with the US7/US8/UL23/US3-deleted rPRV did not show any nervous symptoms, and all the dogs survived for the duration of the experiment. Tissue viral load analyses also showed that the virulence of the US7/US8/UL23/US3-deleted rPRV was significantly reduced in dogs. This study provides evidence that the US7/US8/UL23-deleted rPRV variant still exhibits high virulence for dogs and also highlights the role of the US3 gene in the pathogenicity of PRV in dogs and provides a strategy for developing a safer vaccine.


Subject(s)
Gene Deletion , Herpesvirus 1, Suid/genetics , Herpesvirus 1, Suid/pathogenicity , Pseudorabies/virology , Rabies Vaccines/immunology , Viral Proteins/genetics , Animals , Antibodies, Viral/blood , CRISPR-Cas Systems , Dogs , Herpesvirus 1, Suid/growth & development , Pseudorabies/immunology , Rabies Vaccines/administration & dosage , Rabies Vaccines/genetics , Vaccination , Vaccines, Attenuated/administration & dosage , Vaccines, Attenuated/immunology , Vaccines, Synthetic/administration & dosage , Vaccines, Synthetic/immunology , Viral Envelope Proteins/genetics , Virulence
14.
Neuroinformatics ; 18(2): 199-218, 2020 04.
Article in English | MEDLINE | ID: mdl-31396858

ABSTRACT

Neuronal shape reconstruction is a helpful technique for establishing neuron identity, inferring neuronal connections, mapping neuronal circuits, and so on. Advances in optical imaging techniques have enabled data collection that includes the shape of a neuron across the whole brain, considerably extending the scope of neuronal anatomy. However, such datasets often include many fuzzy neurites and many crossover regions that neurites are closely attached, which make neuronal shape reconstruction more challenging. In this study, we proposed a convex image segmentation model for neuronal shape reconstruction that segments a neurite into cross sections along its traced skeleton. Both the sparse nature of gradient images and the rule that fuzzy neurites usually have a small radius are utilized to improve neuronal shape reconstruction in regions with fuzzy neurites. Because the model is closely related to the traced skeleton point, we can use this relationship for identifying neurite with crossover regions. We demonstrated the performance of our model on various datasets, including those with fuzzy neurites and neurites with crossover regions, and we verified that our model could robustly reconstruct the neuron shape on a brain-wide scale.


Subject(s)
Algorithms , Brain/cytology , Image Processing, Computer-Assisted/methods , Neuroimaging/methods , Neurons/cytology , Humans
15.
Arch Virol ; 164(8): 2159-2164, 2019 Aug.
Article in English | MEDLINE | ID: mdl-31152250

ABSTRACT

Canine enteric coronaviruses (CCoVs) are important enteric pathogens of dogs. CCoVs with different variations are typically pantropic and pathogenic in dogs. In this study, we isolated a CCoV, designated HLJ-073, from a dead 6-week-old male Pekingese with gross lesions and diarrhea. Interestingly, sequence analysis suggested that HLJ-073 contained a 350-nt deletion in ORF3abc compared with reference CCoV isolates, resulting in the loss of portions of ORF3a and ORF3c and the complete loss of ORF3b. Phylogenetic analysis based on the S gene showed that HLJ-073 was more closely related to members of the FCoV II cluster than to members of the CCoV I or CCoV II cluster. Furthermore, recombination analysis suggested that HLJ-073 originated from the recombination of FCoV 79-1683 and CCoV A76, which were both isolated in the United States. Cell tropism experiments suggested that HLJ-073 could effectively replicate in canine macrophages/monocytes and human THP-1 cells. This is the first report of the isolation of strain HLJ-073 in China, and this virus has biological characteristics that are different from those of other reported CCoVs.


Subject(s)
Coronavirus, Canine/genetics , Sequence Deletion/genetics , Animals , Cells, Cultured , China , Coronavirus Infections/virology , Diarrhea/virology , Dog Diseases/virology , Dogs , Humans , Male , Phylogeny , Sequence Analysis, DNA/methods , Spike Glycoprotein, Coronavirus/genetics , THP-1 Cells
16.
Front Neuroanat ; 13: 18, 2019.
Article in English | MEDLINE | ID: mdl-30846931

ABSTRACT

Reconstruction of neuronal morphology from images involves mainly the extraction of neuronal skeleton points. It is an indispensable step in the quantitative analysis of neurons. Due to the complex morphology of neurons, many widely used tracing methods have difficulties in accurately acquiring skeleton points near branch points or in structures with tortuosity. Here, we propose two models to solve these problems. One is based on an L1-norm minimization model, which can better identify tortuous structure, namely, a local structure with large curvature skeleton points; the other detects an optimized branch point by considering the combination patterns of all neurites that link to this point. We combined these two models to achieve optimized skeleton detection for a neuron. We validate our models in various datasets including MOST and BigNeuron. In addition, we demonstrate that our method can optimize the traced skeletons from large-scale images. These characteristics of our approach indicate that it can reduce manual editing of traced skeletons and help to accelerate the accurate reconstruction of neuronal morphology.

17.
Viruses ; 12(1)2019 12 30.
Article in English | MEDLINE | ID: mdl-31905881

ABSTRACT

Feline infectious peritonitis (FIP), caused by virulent feline coronavirus, is the leading infectious cause of death in cats. The type I interferon (type I IFN)-mediated immune responses provide host protection from infectious diseases. Several coronaviruses have been reported to evolve diverse strategies to evade host IFN response. However, whether feline infectious peritonitis virus (FIPV) antagonizes the type I IFN signaling remains unclear. In this study, we demonstrated that FIPV strain DF2 infection not only failed to induce interferon-ß (IFN-ß) and interferon-stimulated gene (ISG) production, but also inhibited Sendai virus (SEV) or polyinosinic-polycytidylic acid (poly(I:C))-induced IFN-ß production. Subsequently, we found that one of the non-structural proteins encoded by the FIPV genome, nsp5, interrupted type I IFN signaling in a protease-dependent manner by cleaving the nuclear factor κB (NF-κB) essential modulator (NEMO) at three sites-glutamine132 (Q132), Q205, and Q231. Further investigation revealed that the cleavage products of NEMO lost the ability to activate the IFN-ß promoter. Mechanistically, the nsp5-mediated NEMO cleavage disrupted the recruitment of the TRAF family member-associated NF-κB activator (TANK) to NEMO, which reduced the phosphorylation of interferon regulatory factor 3 (IRF3), leading to the inhibition of type I IFN production. Our research provides new insights into the mechanism for FIPV to counteract host innate immune response.


Subject(s)
Coronavirus Infections/immunology , Coronavirus, Feline/physiology , Cysteine Endopeptidases/metabolism , I-kappa B Kinase/metabolism , Interferon Type I/antagonists & inhibitors , Viral Nonstructural Proteins/metabolism , Animals , Cats , Cell Line , Coronavirus 3C Proteases , Coronavirus, Feline/metabolism , Cysteine Endopeptidases/genetics , I-kappa B Kinase/genetics , Immune Evasion , Immunity, Innate , Interferon Regulatory Factor-3 , Interferon Type I/metabolism , Interferon-beta/antagonists & inhibitors , Interferon-beta/genetics , Interferon-beta/metabolism , Mutation , NF-kappa B/metabolism , Promoter Regions, Genetic , Signal Transduction , Viral Nonstructural Proteins/genetics
18.
Nanoscale ; 10(37): 17647-17655, 2018 Sep 27.
Article in English | MEDLINE | ID: mdl-30204213

ABSTRACT

A novel copper/copper(i) oxide@carbon (Cu/Cu2O@C) core-shell nanocomposite monodispersed on the surface of reduced graphene oxide (defined as Cu/Cu2O@C-rGO) was synthesized using a one-step calcination of Cu-based metal organic frameworks (MOFs)/graphene oxide (GO) composite structure. The size of the resultant Cu/Cu2O@C core-shell nanoparticles (NPs) on the rGO layers were mainly distributed in range of about 90-100 nm with good dispersion, which was characterized using transmission electron microscopy. X-ray diffraction, Raman spectroscopy, Fourier transform infrared spectroscopy, nitrogen adsorption-desorption isotherms, X-ray photoelectron spectrometry and thermogravimetric analyses were also carried out to characterize the structure and composition of the Cu/Cu2O@C-rGO. The catalytic performance of the Cu/Cu2O@C-rGO composite was evaluated using a reduction reaction from 4-nitrophenol to 4-aminophenol. It was demonstrated that the Cu/Cu2O@C-rGO composite exhibited an excellent catalytic performance, which can reach a nearly 100% conversion rate in 90 s with 0.1 mg of catalyst. This catalyst also showed a good performance for the degradation of other organic dyes such as methylene blue, methyl orange and rhodamine B. Additionally, the core-shell structure exhibited good stability and reusability for the reduction reaction, which was because of its relatively better oxidation resistance than that of the bare Cu NPs. This research provided an efficient and stable non-noble metal-based catalyst derived from the MOF/GO structure.

19.
Biomed Res Int ; 2018: 2739830, 2018.
Article in English | MEDLINE | ID: mdl-30009167

ABSTRACT

Interferons (IFNs) can inhibit most, if not all, viral infections by eliciting the transcription of hundreds of interferon-stimulated genes (ISGs). Feline calicivirus (FCV) is a highly contagious pathogen of cats and a surrogate for Norwalk virus. Interferon efficiently inhibits the replication of FCV, but the mechanism of the antiviral activity is poorly understood. Here, we evaluated the anti-FCV activity of ten ISGs, whose antiviral activities were previously reported. The results showed that interferon regulatory factor 1 (IRF1) can significantly inhibit the replication of FCV, whereas the other ISGs tested in this study failed. Further, we found that IRF1 was localized in the nucleus and efficiently activated IFN-ß and the ISRE promoter. IRF1 can trigger the production of endogenous interferon and the expression of ISGs, suggesting that IRF1 can positively regulate IFN signalling. Importantly, the mRNA and protein levels of IRF1 were reduced upon FCV infection, which may be a new strategy for FCV to evade the innate immune system. Finally, the antiviral activity of IRF1 against feline panleukopenia virus, feline herpesvirus, and feline infectious peritonitis virus was demonstrated. These data indicate that feline IRF1 plays an important role in regulating the host type I IFN response and inhibiting feline viral infections.


Subject(s)
Antiviral Agents/pharmacology , Calicivirus, Feline/immunology , Interferon Regulatory Factor-1/immunology , Virus Replication , Animals , Caliciviridae Infections/immunology , Caliciviridae Infections/veterinary , Cat Diseases/immunology , Cats , Viruses
20.
J Virol Methods ; 262: 61-64, 2018 12.
Article in English | MEDLINE | ID: mdl-30016702

ABSTRACT

Mammalian reovirus (MRV) infects many species. Over the past decades, MRV infections in pigs have been reported, and several highly pathogenic MRV strains have recently been isolated in the United States. In this study, an indirect enzyme-linked immunosorbent assay (ELISA) against the σ1 protein from a serotype 3 reovirus strain (MPC/04) was established to detect antibodies in pigs. The assay did not react with antisera against other pig pathogens and was consistent with the indirect immunofluorescence assay (IFA) and virus neutralization test (VNT). In conclusion, the assay is specific and highly sensitive, providing a method for large-scale monitoring of the serotype 3 MRV infection epidemiology in pigs.


Subject(s)
Antibodies, Viral/blood , Enzyme-Linked Immunosorbent Assay/methods , Reoviridae Infections/veterinary , Reoviridae/immunology , Swine Diseases/diagnosis , Animals , Fluorescent Antibody Technique, Indirect , Neutralization Tests , Reoviridae/isolation & purification , Reoviridae Infections/diagnosis , Reoviridae Infections/immunology , Serogroup , Swine/virology , Swine Diseases/virology , Viral Fusion Proteins/immunology
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