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1.
Int J Mol Sci ; 22(13)2021 Jun 28.
Article in English | MEDLINE | ID: mdl-34203254

ABSTRACT

In 30 monosubstituted benzene cation radicals, studied at the ωB97XD/aug-cc-pVTZ level, the phenyl rings usually adopt a compressed form, but a differently compressed form-equivalent to an elongated one-may coexist. The computational and literature ionization potentials are well correlated. The geometrical and magnetic aromaticity, estimated using HOMA and NICS indices, show the systems to be structurally aromatic but magnetically antiaromatic or only weakly aromatic. The partial charge is split between the substituent and ring and varies the most at C(ipso). In the ring, the spin is 70%, concentrated equally at the C(ipso) and C(p) atoms. The sEDA(D) and pEDA(D) descriptors of the substituent effect in cation radicals, respectively, were determined. In cation radicals, the substituent effect on the σ-electron system is like that in the ground state. The effect on the π-electron systems is long-range, and its propagation in the radical quinone-like ring is unlike that in the neutral molecules. The pEDA(D) descriptor correlates well with the partial spin at C(ipso) and C(p) and weakly with the HOMA(D) index. The correlation of the spin at the ring π-electron system and the pEDA(D) descriptor shows that the electron charge supplied to the ring π-electron system and the spin flow oppositely.


Subject(s)
Benzene/chemistry , Cations/chemistry , Molecular Structure
2.
ACS Omega ; 5(16): 9477-9490, 2020 Apr 28.
Article in English | MEDLINE | ID: mdl-32363300

ABSTRACT

The structure of 30 monosubstituted benzenes in the first excited triplet T1 state was optimized with both unrestricted (U) and restricted open shell (RO) approximations combined with the ωB97XD/aug-cc-pVTZ basis method. The substituents exhibited diverse σ- and π-electron-donating and/or -withdrawing groups. Two different positions of the substituents are observed in the studied compounds in the T1 state: one distorted from the plane and the other coplanar with a quinoidal ring. The majority of the substituents are π-electron donating in the first group while π-electron withdrawing in the second one. Basically, U- and RO-ωB97XD approximations yield concordant results except for the B-substituents and a few of the planar groups. In the T1 state, the studied molecules are not aromatic, yet aromaticity estimated using the HOMA (harmonic oscillator model of aromaticity) index increases from ca. -0.2 to ca. 0.4 with substituent distortion, while in the S1 state, they are only slightly less aromatic than in the ground state (HOMA ≈0.8 vs ≈1.0, respectively). Unexpectedly, the sEDA(T1) and pEDA(T1) substituent effect descriptors do not correlate with analogous parameters for the ground and first excited singlet states. This is because in the T1 state, the geometry of the ring changes dramatically and the sEDA(T1) and pEDA(T1) descriptors do not characterize only the functional group but the entire molecule. Thus, they cannot provide useful scales for the substituents in the T1 states. We found that the spin density in the T1 states is accumulated at the Cipso and Cp atoms, and with the substituent deformation angle, it nonlinearly increases at the former while decreases at the latter. It appeared that the gap between singly unoccupied molecular orbital and singly occupied molecular orbital (SUMO-SOMO) is determined by the change of the SOMO energy because the former is essentially constant. For the nonplanar structures, SOMO correlates with the torsion angle of the substituent and the ground-state pEDA(S0) descriptor of the π-electron-donating substituents ranging from 0.02 to 0.2 e. Finally, shapes of the SOMO-1 instead of SOMO frontier orbitals in the T1 state somehow resemble the highest occupied molecular orbital ones of the S0 and S1 states. For several planar systems, the shape of the U- and RO-density functional theory-calculated SOMO-1 orbitals differs substantially.

3.
J Phys Chem A ; 122(19): 4609-4621, 2018 May 17.
Article in English | MEDLINE | ID: mdl-29698609

ABSTRACT

sEDA, pEDA, and cSAR descriptors of the substituent effect were determined for >30 monosubstituted benzenes in the first excited singlet S1 state at the LC-ωB97XD/aug-cc-pVTZ level. It was found that in the S1 state, the σ- and π-valence electrons are a bit less and a bit more affected, respectively, than in the S0 state, but basically, the effect in both states remains the same. In the S0 and S1 states, the d(C-X) distances to the substituent's first atom and the ring perimeter correlate with the sEDA and pEDA in the appropriate states, respectively. The energies and the gap of the frontier orbitals in the two states are linearly correlated and for the HOMO(S1), LUMO(S1), and HOMO(S1)-LUMO(S1) gap correlate also with the pEDA(S1) and cSAR(S1) descriptors. In all studied correlations, three similar groups of substituents can be distinguished, for which correlations (i) are very good, (ii) deviate slightly, and (iii) deviate significantly. Comparison of the shape of the HOMO(S0) and HOMO(S1) orbitals shows that for case (i) HOMO orbitals exhibit almost perfect antisymmetry against the benzene plane, for case (ii) the antisymmetry of HOMO in one of the states is either perturbed or changed, and for case (iii) one HOMO state has σ-character.

4.
Comput Theor Chem ; 1005: 35-44, 2013 Feb 01.
Article in English | MEDLINE | ID: mdl-32288988

ABSTRACT

The constitutional isomers and tautomers of oxadiazolones, as well as their mono- and disulfur analogues, were calculated at the B3LYP/aug-cc-pVDZ level. Four groups of 30 molecules each were considered: oxadiazolone, oxadiazolthione, thiadiazolone, and thiadiazolthione isomers. The compounds were categorized into six groups according to permutations of three heteroatoms in the five-membered ring. Additionally, each of the constitutional isomer was considered to have five tautomers conserving stable five-membered ring: two NH tautomers, two rotameric OH (or SH) forms and one CH2 tautomer. It appeared that the largest difference between oxadiazolone O and S analogues is produced by the kind of chalcogen atom in the ring, which is strained when the O atom is in the ring while much less strained when the S-atom, of much larger van der Waals radius, is built into the ring. The external chalcogen is only modifying the general energetic factors. The comparison of energetics of analogous groups of molecules with thiadiazole and oxadiazole rings is done in details as well as differences resulting from different external chalcogen atoms are discussed as well. The presence of water surrounding was mimicked with the IEF-PCM implicit water model which did not change general isomer relative stability picture, but for some special cases indicated an extra stability of the forms with external OH or SH groups. The aromaticity monitored by the structural HOMA aromaticity index shows that the systems are not additionally stabilized by pi-electron delocalization. The fair linear correlation between the aromaticity indices of oxadiazolones and oxadiazolthiones shows that the pi-electron system in the studied systems is not sensitive to change of the external chalcogen group.

5.
Arch Otolaryngol Head Neck Surg ; 129(9): 929-33, 2003 Sep.
Article in English | MEDLINE | ID: mdl-12975263

ABSTRACT

OBJECTIVE: To estimate the utility of ultrasonography in diagnosis and differentiation of pleomorphic adenomas. DESIGN: From the group of 88 patients examined by ultrasound, who were referred because of the tumor in the preauricular area, submandibular area, or cheek, pleomorphic adenoma was finally diagnosed in 24 (with multiple recurrent tumors in 2 patients). RESULTS: Ultrasound was able to differentiate between benign and malignant lesions with 96% accuracy in this study. Predicting that the detected tumor was pleomorphic adenoma was possible with up to 84% accuracy. In 15 of 22 patients with primary pleomorphic adenoma, ultrasound guided fine-needle aspiration biopsy. High-resolution probes and harmonic imaging enabled demonstrationof histopathologic heterogeneity of pleomorphic adenomas (in 16 primary tumors [73%]). Of primary pleomorphic adenomas, 95% (21/22) had 5 or fewer vessels detectable in the whole lesion. CONCLUSIONS: Modern ultrasound is highly valuable, useful, and reliable in differential diagnosis of tumors in the preauricular area, submandibular area, and cheek. It enables precise localization, measurements, and assessment of the structure of lesions. It may be the first and last imaging method needed to formulate the final diagnosis, or it may guide fine-needle aspiration biopsy. In many cases, ultrasound may also suggest the nature of the tumor.


Subject(s)
Adenoma, Pleomorphic/diagnostic imaging , Head and Neck Neoplasms/diagnostic imaging , Masseter Muscle/diagnostic imaging , Parotid Neoplasms/diagnostic imaging , Submandibular Gland Neoplasms/diagnostic imaging , Adenoma, Pleomorphic/pathology , Adolescent , Adult , Aged , Aged, 80 and over , Biopsy, Needle , Diagnosis, Differential , Female , Head and Neck Neoplasms/pathology , Humans , Male , Masseter Muscle/pathology , Middle Aged , Parotid Neoplasms/pathology , Prospective Studies , Submandibular Gland Neoplasms/pathology , Ultrasonography
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