Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 20 de 25
Filter
1.
Parasitol Res ; 123(1): 54, 2023 Dec 16.
Article in English | MEDLINE | ID: mdl-38102492

ABSTRACT

Uganda's diverse small mammalian fauna thrives due to its rich habitat diversity, which hosts a wide range of blood parasites, including trypanosomes, particularly the subgenus Herpetosoma typical for rodent hosts. We screened a total of 711 small mammals from various habitats for trypanosomes, with 253 microscopically examined blood smears and 458 tissue samples tested by nested PCR of the 18S rRNA gene. Of 51 rodent and 12 shrew species tested, microscopic screening reaches 7% overall prevalence (with four rodent species positive out of 15 and none of the shrew species out of four), while nested PCR indicated a prevalence of 13% (17 rodent and five shrew species positive out of 49 and 10, respectively). We identified 27 genotypes representing 11 trypanosome species, of which the majority (24 genotypes/9 species) belong to the Herpetosoma subgenus. Among these, we detected 15 new genotypes and two putative new species, labeled AF24 (found in Lophuromys woosnami) and AF25 (in Graphiurus murinus). Our finding of three new genotypes of the previously detected species AF01 belonging to the subgenus Ornithotrypanum in two Grammomys species and Oenomys hypoxanthus clearly indicates the consistent occurrence of this avian trypanosome in African small mammals. Additionally, in Aethomys hindei, we detected the putative new species of the subgenus Aneza. Within the T. lewisi subclade, we detected eleven genotypes, including six new; however, only the genotype AF05b from Mus and Rattus represents the invasive T. lewisi. Our study has improved our understanding of trypanosome diversity in African small mammals. The detection of T. lewisi in native small mammals expands the range of host species and highlighting the need for a broader approach to the epidemiology of T. lewisi.


Subject(s)
Trypanosoma lewisi , Trypanosoma , Trypanosomiasis , Rats , Animals , Trypanosoma lewisi/genetics , Shrews , Uganda/epidemiology , Trypanosoma/genetics , Trypanosomiasis/epidemiology , Trypanosomiasis/veterinary , Trypanosomiasis/parasitology , Murinae/parasitology , Phylogeny
2.
Sci Data ; 10(1): 798, 2023 11 11.
Article in English | MEDLINE | ID: mdl-37952006

ABSTRACT

The multimammate mice (Mastomys natalensis) is the most-studied rodent species in sub-Saharan Africa, where it is an important pest species in agriculture and carrier of zoonotic diseases (e.g. Lassa virus). Here, we provide a unique dataset that consists of twenty-nine years of continuous monthly capture-mark-recapture entries on one 3 ha mosaic field (MOSA) in Morogoro, Tanzania. It is one of the most accurate and long-running capture-recapture time series on a small mammal species worldwide and unique to Africa. The database can be used by ecologists to test hypotheses on the population dynamics of small mammals (e.g. to test the effect of climate change), or to validate new algorithms on real long-term field data (e.g. new survival analyses techniques). It is also useful for both scientists and decision-makers who want to optimize rodent control strategies and predict outbreaks of multimammate mice.


Subject(s)
Murinae , Population Dynamics , Animals , Mice , Tanzania
3.
J Parasitol Res ; 2023: 7074041, 2023.
Article in English | MEDLINE | ID: mdl-37928436

ABSTRACT

Ectoparasites like fleas, mites, and ticks that are key carriers of harmful pathogens such as viruses, bacteria, cestodes, and nematodes live on rodents and shrews. It should be noted that rodents' ecological adaptability makes them suitable as parasite hosts. The main objective of the study was to determine the ectoparasite assemblages in rodents and shrews along a degradation gradient, while comparing infestation levels in different habitats with varying levels of degradation. The study was conducted in Mabira Central Forest Reserve. Ectoparasites were collected following rodent and shrew removal trapping which was done using Sherman's traps set along transects of 200 meters in three habitat strata that included adjacent forest habitats, degraded forest edge, and regenerating forest interior. Data was collected intermittently with a break every two months for one year from November 2018 to December 2019. A total of 1411 rodents and shrews were collected, yielding a total of 5692 ectoparasites from 22 host species (17 rodents and 5 shrews). The most prevalent group of ectoparasites was mites followed by fleas, lice, ticks, and earwig. Ectoparasite prevalence significantly differed depending on hosts species (P = 0.001) and host age (P = 0.022), but not host sex (P = 0.78), while mean infestation significantly varied basing on host species (P = 0.001), host sex (P = 0.001), season (P = 0.001), and habitat (P = 0.001). Prevalence (P = 0.001) and mean infestation (P = 0.001) significantly varied across studied habitats. The study has emphasized the significance of Praomys jacksoni and Hylomyscus stella as significant hosts for mites and S. congicus as a significant host for fleas. Additionally, environment and host characteristics have a bearing on prevalence and infestation of ectoparasites with habitat degradation playing a significant role in the occurrence of ectoparasites, thereby emphasizing its contribution to zoonotic outbreaks.

4.
PLoS Negl Trop Dis ; 17(8): e0011560, 2023 08.
Article in English | MEDLINE | ID: mdl-37611063

ABSTRACT

Epidemics of Rift Valley fever (RVF), a mosquito-borne zoonotic disease caused by RVF virus, have been linked to exceptionally heavy rainfall and widespread flooding. The disease is endemic in most African countries and pose a major global health risk. Given that the disease was reported in various districts of Tanzania, we hypothesized a lack of knowledge about RVF epidemiology among agropastoral and pastoral communities. The research took place in a period of 7 months, from July, 2021 to January, 2022. The aim of this study was to assess the knowledge, attitudes, and practices (KAP) among the agropastoral and pastoral communities of Ngorongoro district towards RVF. The survey employed a mixed method system, which included 3 focus groups (each comprised 12 individuals), 20 key informant interviews and administration of questionnaire (N = 352) in agropastoral and pastoral community members of Ngorongoro district. The relationship between demographic characteristics and communities' knowledge, attitudes, and practices regarding RVF was observed using a multiple logistic regression model. A total of 352 participants were interviewed, with the majority (67.61%) being male and 32.39% being female, majority (39.5%) attending primary school, and majority (58.2%) being pastoralists. The findings showed that only 36.1%, 38.64% and 16.19% of participants had good knowledge, positive attitude and good practices regarding RVF respectively. Significant demographic factors related with knowledge included: gender (OR = 1.9, CI = 1.03-3.56, P = 0.041), education levels (primary: OR = 3.97, CI = 2-8.16, P = 0.000; secondary: OR = 15.27, CI = 5.5-46.23, P = 0.000 and college: OR = 34. 23, CI = 5.4-67.22, P = 0.000), and locality (Pinyinyi: OR = 0.14, CI = 0.05-0.38, P = 0.000 and Sale: OR = 0.14, CI = 0.04-0.44, P = 0.001). Male participants showed significant positive attitude towards RVF compared to female (OR = 2.37, CI = 1.35-4.17, P = 0.003). Individuals with formal education showed a significant positive attitude toward RVF compared to informal (OR>1, P<0.05). Agropastoral members showed a significant negative attitude toward RVF compared to pastoralists (OR = 0.51, CI = 0.26-0.99, P = 0.048). The calculated RVF prevention practices values were insignificantly (P = 0.853) correlated with knowledge values. The significant correlation between knowledge and attitude, as well as attitude and practice were found (P<0.05). In general, the study revealed poor knowledge, negative attitude and poor practices of communities towards RVF. The lack of regular education programs to make the communities aware of the disease was implicated for these findings. This recommends that provision of health education should be a long-term practice among agropastoral and pastoral communities in order to prevent further RVF outbreaks in Tanzania.


Subject(s)
Ecosystem , Rift Valley Fever , Animals , Female , Male , Humans , Rift Valley Fever/epidemiology , Rift Valley Fever/prevention & control , Tanzania/epidemiology , Health Knowledge, Attitudes, Practice , Environment
5.
J Public Health Afr ; 14(6): 2385, 2023 Jun 21.
Article in English | MEDLINE | ID: mdl-37538935

ABSTRACT

In addition to their economic significance, rodents are hosts and transmit diseases. Most of rodent-borne diseases are endemic in rural Africa and sporadically lead to epidemics. Ngorongoro district is inhabited by humans, livestock, and wild animals. Therefore, a cross-sectional study was conducted to assess the level of knowledge, attitudes, and practices toward rodent-borne diseases among communities. The study used 3 focus groups, 20 key informant interviews, and the questionnaire (N=352) to collect data. The study found that 8.52% of respondents had good knowledge, 35.5% had a positive attitude and 94.3% had good practices toward rodent-borne diseases. The study revealed that only 28.13% of participants were aware of rodent-borne zoonoses. The majority of them (77.27%) believe that rodents are pests that destroy crops and do not transmit pathogens. Moreover, the results showed that the majority of them (82.9%) live in dilapidated huts that serve as rodent breeding places. Additionally, except for education and religion, the level of knowledge had no significant relationship with most of the participants' demographic variables. When compared to individuals who didn't attend school, those with secondary education (OR=7.96, CI=1.4-45.31, P=0.017) had greater knowledge of rodent-borne diseases and management. Similarly, to how attitude and practice were found to be considerably (r=0.3216, P=0.000) positively correlated, general knowledge and general practice scores were found to be significantly (r=0.1608, P=0.002) positively correlated. Despite showing good practices, the communities still lack knowledge of rodent-borne zoonosis. Rodent-borne disease education should be considered in Ngorongoro and other places.

6.
Biology (Basel) ; 12(3)2023 Mar 02.
Article in English | MEDLINE | ID: mdl-36979086

ABSTRACT

Climate change causes organisms, including species that act as parasite reservoirs and vectors, to shift their distribution to higher altitudes, affecting wildlife infestation patterns. We studied how ectoparasite distributions varied with altitude using two rodent species, Montemys delectorum and Rhabdomys dilectus, at different elevations (1500-3500 m). The ectoparasites infesting the two rodent species were influenced by the host sex, species, and temperature. We expected host density to predict parasite infestation patterns, because hosts in higher densities should have more parasites due to increased contact between individuals. However, temperature, not host density, affected ectoparasite distribution. Since temperatures decrease with elevation, parasite prevalences and abundances were lower at higher elevations, highlighting that the cold conditions at higher elevations limit reproduction and development-this shows that higher elevation zones are ideal for conservation. The rodents and ectoparasite species described in this study have been reported as vectors of diseases of medical and veterinary importance, necessitating precautions. Moreover, Mount Meru is a refuge for a number of endemic and threatened species on the IUCN Red List. Thus, the parasitic infection can also be an additional risk to these critical species as well as biodiversity in general. Therefore, our study lays the groundwork for future wildlife disease surveillance and biodiversity conservation management actions. The study found a previously uncharacterized mite species in the Mesostigmata group that was previously known to be a parasite of honeybees. Further investigations may shed light into the role of this mite species on Mount Meru.

7.
Virology ; 581: 116-127, 2023 04.
Article in English | MEDLINE | ID: mdl-36958216

ABSTRACT

Mastomys natalensis-borne mammarenaviruses appear specific to subspecific M. natalensis taxa rather than to the whole species. Yet mammarenaviruses carried by M. natalensis are known to spill over and jump hosts in northern sub-Saharan Africa. Phylogeographic studies increasingly show that, like M. natalensis, small mammals in sub-Saharan Africa are often genetically structured into several subspecific taxa. Other mammarenaviruses may thus also form virus-subspecific host taxon associations. To investigate this, and if mammarenaviruses carried by M. natalensis in southern Africa are less prone to spill-over, we screened 1225 non-M. natalensis samples from Tanzania where many small mammal taxa meet. We found mammarenavirus RNA in 6 samples. Genetic/genomic characterisation confirmed they were not spill-over from M. natalensis. We detected host jumps among rodent tribe members and an association between mammarenaviruses and subspecific taxa of Mus minutoides and Grammomys surdaster, indicating host genetic structure may be crucial to understand virus distribution and host specificity.


Subject(s)
Arenaviridae , Rodent Diseases , Animals , Arenaviridae/genetics , Host Specificity , Murinae , Phylogeography , Tanzania
8.
Article in English | MEDLINE | ID: mdl-35564782

ABSTRACT

The interaction of rodents with humans and chicken in the household environment can facilitate transmission of multidrug-resistant (MDR) Escherichia coli (E. coli), causing infections that are difficult to treat. We investigated the presence of genes encoded for carbapenem, extended spectrum beta-lactamases (ESBL), tetracycline and quinolones resistance, and virulence among 50 MDR E. coli isolated from human (n = 14), chicken (n = 12), rodent (n = 10), and soil (n = 14) samples using multiplex polymerase chain reaction (PCR). Overall, the antimicrobial resistance genes (ARGs) detected were: blaTEM 23/50 (46%), blaCTX-M 13/50 (26%), tetA 23/50 (46%), tetB 7/50 (14%), qnrA 12/50 (24%), qnrB 4/50 (8%), blaOXA-48 6/50 (12%), and blaKPC 3/50 (6%), while blaIMP, blaVIM, and blaNDM-1 were not found. The virulence genes (VGs) found were: ompA 36/50 (72%), traT 13/50 (26%), east 9/50 (18%), bfp 5/50 (10%), eae 1/50 (2%), and stx-1 2/50 (4%), while hlyA and cnf genes were not detected. Resistance (blaTEM, blaCTX-M, blaSHV, tetA, tetB, and qnrA) and virulence (traT) genes were found in all sample sources while stx-1 and eae were only found in chicken and rodent isolates, respectively. Tetracycline resistance phenotypes correlated with genotypes tetA (r = 0.94), tetB (r = 0.90), blaKPC (r = 0.90; blaOXA-48 (r = 0.89), and qnrA (r = 0.96). ESBL resistance was correlated with genotypes blaKPC (r = 0.93), blaOXA-48 (r = 0.90), and qnrA (r = 0.96) resistance. Positive correlations were observed between resistance and virulence genes: qnrB and bfp (r = 0.63) also blaTEM, and traT (r = 0.51). Principal component analysis (PCA) indicated that tetA, tetB, blaTEM, blaCTX-M, qnrA, and qnrB genes contributed to tetracycline, cefotaxime, and quinolone resistance, respectively. While traT stx-1, bfp, ompA, east, and eae genes contributed to virulence of MDR E. coli isolates. The PCA ellipses show that isolates from rodents had more ARGs and virulence genes compared to those isolated from chicken, soil, and humans.


Subject(s)
Escherichia coli Infections , Quinolones , Animals , Anti-Bacterial Agents/pharmacology , Chickens , Drug Resistance, Bacterial/genetics , Drug Resistance, Multiple, Bacterial/genetics , Escherichia coli , Escherichia coli Infections/epidemiology , Escherichia coli Infections/veterinary , Humans , Microbial Sensitivity Tests , Molecular Epidemiology , Rodentia , Soil , Tanzania/epidemiology , Tetracyclines , Virulence Factors/genetics , beta-Lactamases/genetics
9.
Antibiotics (Basel) ; 10(9)2021 Sep 21.
Article in English | MEDLINE | ID: mdl-34572718

ABSTRACT

We investigated antibiotic resistance profiles of Escherichia coli among 960 samples obtained from chickens (236), humans (243), rodents (101) and soil (290). E. coli was isolated from 650 (67.7%) samples. Isolation frequency varied significantly between chickens, humans, rodents and soil samples, being 81.6%, 86.5%, 79.2% and 31.0%, respectively (p < 0.001). Resistance rates were particularly higher against imipenem (79.8%), cefotaxime (79.7%) and tetracycline (73.7%) and moderate against amoxicillin-clavulanate (49.4%). Overall, 78.8% of the isolates were multidrug-resistant (MDR) among which, 38.8%, 25.1%, 12.9% and 2.5% exhibited resistance to three, four, five and six different classes of antibiotics, respectively. Multidrug-resistant E. coli were observed in 27.7%, 30.3%, 10.8% and 10.0% of the isolates from chickens, humans, rodents and soil samples, respectively. Our results show high levels of antimicrobial resistance including MDR in E. coli isolated from chickens, humans, rodents and soil samples in Karatu, Northern Tanzania. Comprehensive interventions using a one-health approach are needed and should include improving (i) awareness of the community on judicious use of antimicrobial agents in humans and animals, (ii) house conditions and waste management and (iii) rodent control measures.

10.
Virus Evol ; 6(2): veaa039, 2020 Jul.
Article in English | MEDLINE | ID: mdl-33033629

ABSTRACT

Mastomys natalensis is widespread in sub-Saharan Africa and hosts several arenavirus species, including the pathogenic zoonotic Lassa virus in West Africa. Mitochondrial lineages sub-divide the range of M. natalensis and have been associated with cryptic structure within the species. To test specificity of arenaviruses to hosts carrying these lineages, we screened 1772 M. natalensis in a large area of Tanzania where three mitochondrial lineages meet. We detected fifty-two individuals that were positive for one of three arenaviruses: Gairo, Morogoro, and Luna virus. This is the first record of Luna virus in Tanzania. We confirmed the specificity of each arenavirus to a distinct host mitochondrial lineage except for three cases in one locality at the centre of a host hybrid zone. No arenaviruses were detected in a large part of the study area. Morogoro and Gairo virus showed differences in prevalence (Morogoro virus lower than Gairo virus) and in genetic structure (Morogoro virus more structured than Gairo virus). However, both viruses have genetic neighbourhood size estimates of the same order of magnitude as Lassa virus. While differences in arenavirus and/or host evolutionary and ecological dynamics may exist, Tanzanian arenaviruses could be suited to model Lassa virus dynamics in M. natalensis.

11.
Infect Genet Evol ; 75: 103934, 2019 11.
Article in English | MEDLINE | ID: mdl-31247340

ABSTRACT

Pneumocystis is a genus of parasitic fungi infecting lung tissues in a wide range of mammal species, displaying a strong host specificity and patterns of co-speciation with their hosts. However, a recent study on Asiatic murids challenged these patterns reporting several Pneumocystis lineages/species shared by different host species or even genera in the Rattini and Murini tribes. Here we screened lung samples of 27 species of African rodents from five families for the presence of Pneumocystis DNA. Using reconstructed multi-locus phylogenies of both hosts and parasites, we tested the hypothesis of their co-evolution. We found that Pneumocystis is widespread in African rodents, detected in all but seven screened host species, with species-level prevalence ranging from 5.9 to 100%. Several host species carry pairs of highly divergent Pneumocystis lineages/species. The retrieved co-phylogenetic signal was highly significant (p = .0017). We found multiple co-speciations, sorting events and two host-shift events, which occurred between Murinae and Deomyinae hosts. Comparison of genetic distances suggests higher substitution rates for Pneumocystis relative to the rodent hosts on neutral loci and slower rates on selected ones. We discuss life-history traits and population dynamics factors which could explain the observed results.


Subject(s)
Muridae/microbiology , Pneumocystis/physiology , Africa , Animals , Biological Evolution , Genes, Fungal , Host-Pathogen Interactions , Lung/microbiology , Phylogeny , Pneumocystis/classification , Pneumocystis/genetics
12.
Parasit Vectors ; 11(1): 90, 2018 02 08.
Article in English | MEDLINE | ID: mdl-29422075

ABSTRACT

BACKGROUND: Parasite evolution is hypothesized to select for levels of parasite virulence that maximise transmission success. When host population densities fluctuate, low levels of virulence with limited impact on the host are expected, as this should increase the likelihood of surviving periods of low host density. We examined the effects of Morogoro arenavirus on the survival and recapture probability of multimammate mice (Mastomys natalensis) using a seven-year capture-mark-recapture time series. Mastomys natalensis is the natural host of Morogoro virus and is known for its strong seasonal density fluctuations. RESULTS: Antibody presence was negatively correlated with survival probability (effect size: 5-8% per month depending on season) but positively with recapture probability (effect size: 8%). CONCLUSIONS: The small negative correlation between host survival probability and antibody presence suggests that either the virus has a negative effect on host condition, or that hosts with lower survival probability are more likely to obtain Morogoro virus infection, for example due to particular behavioural or immunological traits. The latter hypothesis is supported by the positive correlation between antibody status and recapture probability which suggests that risky behaviour might increase the probability of becoming infected.


Subject(s)
Arenaviridae Infections/veterinary , Arenavirus/isolation & purification , Murinae , Rodent Diseases/mortality , Animals , Antibodies, Viral/blood , Arenaviridae Infections/mortality , Arenavirus/immunology , Behavior, Animal , Rodent Diseases/virology , Survival Analysis
13.
BMC Res Notes ; 11(1): 87, 2018 Jan 31.
Article in English | MEDLINE | ID: mdl-29386067

ABSTRACT

OBJECTIVE: To estimate the prevalence of antibiotic resistance in indicator bacteria Escherichia coli and Enterococci isolated from duck faeces in Morogoro Municipality, Tanzania. RESULTS: Escherichia coli and Enterococcus isolation rates from ducks faeces were 91 and 100% respectively. The prevalence of antibiotic resistance of E. coli and Enterococcus was 70.3 and 42%, respectively. E. coli resistant to four antibiotics were 28 (30.8%) and showed high resistance to ampicillin (81.3), tetracycline (75.8) and trimethoprim-sulphamethoxine (62.3). Multiple antibiotic resistance of Enterococcus were more than 65%. High resistance rates shown by Enterococcus were observed in rifampin (62%), ampicillin (62%) and tetracycline (42%). Almost all farmers (92.3%) left their ducks to scavenge for food around their houses. Antibiotics used in animal treatments were oxytetracyclines, sulfonamides, penicillin dihydrostreptomycin while in humans were tetracycline, ampicillin, and amoxicillin.


Subject(s)
Anti-Bacterial Agents/pharmacology , Asymptomatic Diseases/epidemiology , Drug Resistance, Multiple, Bacterial , Escherichia coli Infections/veterinary , Poultry Diseases/epidemiology , Streptococcal Infections/veterinary , Ampicillin/pharmacology , Animals , Ducks , Enterococcus/drug effects , Enterococcus/growth & development , Enterococcus/isolation & purification , Escherichia coli/drug effects , Escherichia coli/growth & development , Escherichia coli/isolation & purification , Escherichia coli Infections/epidemiology , Escherichia coli Infections/microbiology , Feces/microbiology , Female , Humans , Male , Microbial Sensitivity Tests , Poultry , Poultry Diseases/microbiology , Rifampin/pharmacology , Streptococcal Infections/epidemiology , Streptococcal Infections/microbiology , Tanzania/epidemiology , Tetracycline/pharmacology , Trimethoprim, Sulfamethoxazole Drug Combination/pharmacology
14.
Microb Drug Resist ; 24(3): 260-268, 2018 Apr.
Article in English | MEDLINE | ID: mdl-28759321

ABSTRACT

This study provides an estimate of antimicrobial resistance in intestinal indicator bacteria from humans (n = 97) and food animals (n = 388) in Tanzania. More than 70% of all fecal samples contained tetracycline (TE), sulfamethoxazole (STX), and ampicillin (AMP)-resistant coliforms, while cefotaxime (CTX)-resistant coliforms were observed in 40% of all samples. The average Log10 colony forming units/g of CTX-resistant coliforms in samples from humans were 2.20. Of 390 Escherichia coli tested, 66.4% were resistant to TE, 54.9% to STX, 54.9% to streptomycin, and 36.4% to CTX. Isolates were commonly (65.1%) multiresistant. All CTX-resistant isolates contained blaCTX-M gene type. AMP- and vancomycin-resistant enterococci were rare, and the average concentrations in positive samples were low (log10 0.9 and 0.4, respectively). A low-to-moderate resistance (2.1-15%) was detected in 240 enterococci isolates to the drugs tested, except for rifampicin resistance (75.2% of isolates). The average number of sulII gene copies varied between Log10 5.37 and 5.68 with no significant difference between sample source, while cattle had significantly higher number of tetW genes than humans. These findings, based on randomly obtained samples, will be instrumental in designing antimicrobial resistance (AMR) intervention strategies for Tanzania.


Subject(s)
Anti-Bacterial Agents/pharmacology , Drug Resistance, Multiple, Bacterial/genetics , Enterococcus/drug effects , Escherichia coli Infections/veterinary , Escherichia coli/drug effects , Streptococcal Infections/veterinary , Ampicillin/pharmacology , Animals , Cattle , Cefotaxime/pharmacology , Enterococcus/classification , Enterococcus/genetics , Enterococcus/isolation & purification , Escherichia coli/classification , Escherichia coli/genetics , Escherichia coli/isolation & purification , Escherichia coli Infections/drug therapy , Escherichia coli Infections/epidemiology , Escherichia coli Infections/microbiology , Escherichia coli Proteins/genetics , Escherichia coli Proteins/metabolism , Feces/microbiology , Gene Expression , Humans , Livestock/microbiology , Plasmids/chemistry , Plasmids/metabolism , Poultry/microbiology , Rifampin/pharmacology , Streptococcal Infections/drug therapy , Streptococcal Infections/epidemiology , Streptococcal Infections/microbiology , Streptomycin/pharmacology , Sulfamethoxazole/pharmacology , Tanzania/epidemiology , Tetracycline/pharmacology
15.
J Infect Dev Ctries ; 10(2): 143-8, 2016 Feb 28.
Article in English | MEDLINE | ID: mdl-26927455

ABSTRACT

INTRODUCTION: Staphylococcus aureus is an opportunistic pathogen causing infections in humans and animals. Here we report for the first time the prevalence of nasal carriage, spa typing and antimicrobial resistance of S. aureus in a Tanzanian livestock community. METHODOLOGY: Nasal swabs were taken from 100 humans, 100 pigs and 100 dogs in Morogoro Municipal. Each swab was enriched in Mueller Hinton broth with 6.5% NaCl and subcultured on chromogenic agar for S. aureus detection. Presumptive S. aureus colonies were confirmed to the species level by nuc PCR and analysed by spa typing. Antimicrobial susceptibility patterns were determined by disc diffusion method. RESULTS: S. aureus was isolated from 22% of humans, 4% of pigs and 11% of dogs. A total of 21 spa types were identified: 13, 7 and 1 in human, dogs, and pigs, respectively. Three spa types (t314, t223 and t084) were shared between humans and dogs. A novel spa type (t10779) was identified in an isolate recovered from a colonized human. Antimicrobials tested revealed resistance to ampicillin in all isolates, moderate resistances to other antimicrobials with tetracycline resistance being the most frequent. CONCLUSION: S. aureus carrier frequencies in dogs and humans were within the expected range and low in pigs. The S. aureus spa types circulating in the community were generally not shared by different hosts and majority of types belonged to known clones. Besides ampicillin resistance, moderate levels of antimicrobial resistance were observed irrespective of the host species from which the strains were isolated.


Subject(s)
Anti-Bacterial Agents/pharmacology , Carrier State/microbiology , Carrier State/veterinary , Molecular Typing , Staphylococcal Infections/microbiology , Staphylococcal Infections/veterinary , Staphylococcus aureus/drug effects , Animals , Carrier State/epidemiology , Disk Diffusion Antimicrobial Tests , Dogs , Genetic Variation , Healthy Volunteers , Humans , Nasal Mucosa/microbiology , Polymerase Chain Reaction , Prevalence , Staphylococcal Infections/epidemiology , Staphylococcal Protein A/genetics , Staphylococcus aureus/classification , Staphylococcus aureus/isolation & purification , Swine , Tanzania/epidemiology
16.
PLoS Negl Trop Dis ; 9(12): e0004251, 2015 Dec.
Article in English | MEDLINE | ID: mdl-26624890

ABSTRACT

The burden of leptospirosis in humans and animals in Africa is higher than that reported from other parts of the world. However, the disease is not routinely diagnosed in the continent. One of major factors limiting diagnosis is the poor availability of live isolates of locally circulating Leptospira serovars for inclusion in the antigen panel of the gold standard microscopic agglutination test (MAT) for detecting antibodies against leptospirosis. To gain insight in Leptospira serovars and their natural hosts occurring in Tanzania, concomitantly enabling the improvement of the MAT by inclusion of fresh local isolates, a total of 52 Leptospira isolates were obtained from fresh urine and kidney homogenates, collected between 1996 and 2006 from small mammals, cattle and pigs. Isolates were identified by serogrouping, cross agglutination absorption test (CAAT), and molecular typing. Common Leptospira serovars with their respective animal hosts were: Sokoine (cattle and rodents); Kenya (rodents and shrews); Mwogolo (rodents); Lora (rodents); Qunjian (rodent); serogroup Grippotyphosa (cattle); and an unknown serogroup from pigs. Inclusion of local serovars particularly serovar Sokoine in MAT revealed a 10-fold increase in leptospirosis prevalence in Tanzania from 1.9% to 16.9% in rodents and 0.26% to 10.75% in humans. This indicates that local serovars are useful for diagnosis of human and animal leptospirosis in Tanzania and other African countries.


Subject(s)
Antibodies, Bacterial/blood , Disease Reservoirs , Leptospira/classification , Leptospirosis/diagnosis , Leptospirosis/veterinary , Serogroup , Africa/epidemiology , Agglutination Tests , Animals , Humans , Kidney/microbiology , Leptospira/isolation & purification , Leptospirosis/microbiology , Mammals , Molecular Typing , Prevalence , Urine/microbiology
17.
Tanzan J Health Res ; 16(3): 250-5, 2014 Jul.
Article in English | MEDLINE | ID: mdl-26867284

ABSTRACT

Leptospirosis and toxoplasmosis are among understudied zoonotic diseases that are also not diagnosed routinely in Tanzania. Humans get leptospirosis and toxoplasmosis through contact with an environment contaminated with Leptospira bacteria and Toxoplasma protozoa from reservoir hosts, which are rodents and cats, respectively. The objective of this study was to determine the prevalence of Leptospira and Toxoplasma infections in rodents and shrews in Mikese area of Morogoro Rural District in eastern Tanzania. A total of 89 rodents and one shrew from cultivated and fallow land were tested for leptospirosis using six Leptospira serovars: Sokoine, Kenya, Canicola, Lora, Hebdomadis and Pomona. Toxoplasmosis was determined in 46 rodents brain smears. The prevalence of leptospirosis was 25.8%, and Leptospira serovar Sokoine was the most prevalent serovar (16.9%). Toxoplasma was detected in one rodent (2.17%) individual while three rodent individuals had Toxoplasma-like parasites hence were considered suspect positive. Findings suggest potential existence of human leptospirosis which needs to be further investigated. Public awareness of leptospirosis and toxoplasmosis should be promoted and their diagnosis considered in patients in health care facilities.


Subject(s)
Leptospirosis/epidemiology , Rodent Diseases/epidemiology , Rodentia/microbiology , Shrews/microbiology , Toxoplasmosis/epidemiology , Agriculture , Animals , Prevalence , Tanzania/epidemiology
18.
Pest Manag Sci ; 69(3): 371-7, 2013 Mar.
Article in English | MEDLINE | ID: mdl-22718470

ABSTRACT

BACKGROUND: Multimammate mice are the most important vertebrate pests in Sub-Saharan Africa and are also reservoirs of many zoonotic diseases, including sylvan plague. This study investigated the population dynamics and breeding patterns of this mouse in irrigated rice cropping systems in eastern Tanzania. RESULTS: The multimammate mouse, Mastomys natalensis, population varied with habitat and months. Fallow land had a more abundant population than rice fields. The highest population peak was observed during the dry season from July to October. Mastomys natalensis is sexually active throughout the year in the study area, although it reaches the highest level in June and December when rice is at the maturity stage. This suggests that breeding is highly influenced by the presence of a rice crop in both seasons. More juvenile individuals were recorded in August and September, indicating that they were produced in the previous breeding months. The sex ratio of M. natalensis was not skewed to either males or females, indicating that it was at parity. CONCLUSION: Rodent population dynamics during the study periods in all habitats indicated that high birth rates accounted for the rapid population growth and turnover. Regular control and sustainable operations are thus essential if rodent pest populations are to be kept within tolerable limits.


Subject(s)
Murinae/physiology , Oryza/parasitology , Agricultural Irrigation , Animals , Breeding , Ecosystem , Female , Male , Murinae/growth & development , Oryza/growth & development , Population Dynamics , Seasons , Tanzania
19.
Parasit Vectors ; 5: 204, 2012 Sep 19.
Article in English | MEDLINE | ID: mdl-22992264

ABSTRACT

BACKGROUND: Entomopathogenic fungi, particularly those belonging to the genera Metarhizium and Beauveria have shown great promise as arthropod vector control tools. These agents, however, have not been evaluated against flea vectors of plague. FINDINGS: A 3-h exposure to the fungi coated paper at a concentration of 2 × 108 conidia m-2 infected >90% of flea larvae cadavers in the treatment groups. The infection reduced the survival of larvae that had been exposed to fungus relative to controls. The daily risk of dying was four- and over three-fold greater in larvae exposed to M. anisopliae (HR = 4, p<0.001) and B. bassiana (HR = 3.5, p<0.001) respectively. Both fungi can successfully infect and kill larvae of X. brasiliensis with a pooled median survival time (MST±SE) of 2 ± 0.31 days post-exposure. CONCLUSION: These findings justify further research to investigate the bio-control potential of entomopathogenic fungi against fleas.


Subject(s)
Beauveria/physiology , Metarhizium/physiology , Pest Control, Biological/methods , Xenopsylla/microbiology , Animals , Larva/microbiology , Plague/prevention & control , Plague/transmission , Spores, Fungal , Survival Analysis
20.
Integr Zool ; 6(4): 366-74, 2011 Dec.
Article in English | MEDLINE | ID: mdl-22182328

ABSTRACT

We studied associations between rodents and their arthropod ectoparasites in crop fields and household compounds in the highlands of Tigray, Northern Ethiopia. Ectoparasite infestation indices, such as percent infestation, mean abundance, prevalence and host preferences, were calculated for each taxon. In total, 172 rodents from crop fields and 97 from household compounds were trapped. Rodent species and numbers trapped from the crop fields and household compounds were Mastomys awashensis (Lavrenchenko, Likhnova & Baskevich, 1998) (88 and 44), Arvicanthis dembeensis (Ruppel, 1842) (63 and 37) and Acomys sp. (21 and 16), respectively. A total of 558 insects and acarids (belonging to 11 taxa) were recovered from the rodents trapped in the crop fields, and 296 insects and acarid (belonging to 6 taxa) from the rodents trapped in the household compounds. Approximately 66% of the rodents trapped from the crop fields and 47% of those trapped from the household compounds were infested with ectoparasites. Laelaps sp. (64.9%) and Xenopsylla sp. (20.6%) comprised the highest proportion of the ectoparasites recovered in the crop fields, and the same ectoparasites, but in reverse order, comprised the highest proportions in the household compounds (Xenopsylla [50.3%] and Laelaps sp. [29%]). Our study revealed that crop fields and household compounds in the highlands share similar rodents and several ectoparasites. Furthermore, at least 1 of the rodent species and some of the ectoparasites identified in this study were reported to have posed medical and veterinary threats in other parts of Ethiopia and neighboring countries.


Subject(s)
Arthropods/physiology , Ectoparasitic Infestations/veterinary , Rodent Diseases/epidemiology , Rodent Diseases/parasitology , Agriculture , Animals , Ectoparasitic Infestations/epidemiology , Ethiopia/epidemiology , Housing , Prevalence , Species Specificity
SELECTION OF CITATIONS
SEARCH DETAIL
...