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Georgian Med News ; (274): 158-164, 2018 Jan.
Article in English | MEDLINE | ID: mdl-29461246

ABSTRACT

Bacteriophages represent the widest group of viruses, from which only virulent phages are used as antibacterial agent. But the picture in the case of temperate phage is absolutely different; many lysogenic phages express gene products that have subtle effects on the phenotype of the host cell. This process is called lysogenic conversion. In present study we characterized new temperate Enterococcus faecium phage vB_GEC_EFS_2, which was isolated from river Mtkvari. The phage is a member of Siphoviridae family. Whole genome of phage vB_GEC-EfS_2 was sequenced and analyzed. Total length of the genome of phage vB_GEC_EFS_2 is 38 508bp, The assembly contains 65 ORFs, among them - 3 lysis genes , genes coded 13 structural proteins, 1 DNA replication-associated gene, 1 gene coded integration, 3 - lysis-lysogenic cycle regulation, 43 hypothetical proteins. One holin gene contained "Haemolysin XhIA" domain which is surface associated haemolisyn. We isolated and purified holin gene and determine its haemolitic activity alongside with vB_GEC_EfS_2 phage lysate. We clarified the XhIA domain function and role in protein's haemolytic nature and described another kind of lysogenic conversion.


Subject(s)
Bacteriophages/genetics , DNA, Viral/genetics , Genome, Viral , Hemolysin Proteins/genetics , Lysogeny , Siphoviridae/genetics , Bacteriophages/classification , Bacteriophages/isolation & purification , Bacteriophages/metabolism , Cloning, Molecular , DNA, Viral/metabolism , Enterococcus faecium/virology , Escherichia coli/genetics , Escherichia coli/metabolism , Gene Expression , Genetic Vectors/chemistry , Genetic Vectors/metabolism , Genome Size , Georgia (Republic) , Hemolysin Proteins/metabolism , High-Throughput Nucleotide Sequencing , Open Reading Frames , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Rivers/virology , Siphoviridae/classification , Siphoviridae/isolation & purification , Siphoviridae/metabolism
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