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1.
Mol Oncol ; 13(2): 376-391, 2019 02.
Article in English | MEDLINE | ID: mdl-30451357

ABSTRACT

There are increasing demands for informative cancer biomarkers, accessible via minimally invasive procedures, both for initial diagnostics and for follow-up of personalized cancer therapy, including immunotherapy. Fine-needle aspiration (FNA) biopsy provides ready access to relevant tissue samples; however, the minute amounts of sample require sensitive multiplex molecular analysis to be of clinical biomarker utility. We have applied proximity extension assays (PEA) to analyze 167 proteins in FNA samples from patients with breast cancer (BC; n = 25) and benign lesions (n = 32). We demonstrate that the FNA BC samples could be divided into two main clusters, characterized by differences in expression levels of the estrogen receptor (ER) and the proliferation marker Ki67. This clustering corresponded to some extent to established BC subtypes. Our analysis also revealed several proteins whose expression levels differed between BC and benign lesions (e.g., CA9, GZMB, IL-6, VEGFA, CXCL11, PDL1, and PCD1), as well as several chemokines correlating with ER and Ki67 status (e.g., CCL4, CCL8, CCL20, CXCL8, CXCL9, and CXCL17). Finally, we also identified three signatures that could predict Ki67 status, ER status, and tumor grade, respectively, based on a small subset of proteins, which was dominated by chemokines. To our knowledge, expression profiles of CCL13 in benign lesions and BC have not previously been described but were shown herein to correlate with proliferation (P = 0.00095), suggesting a role in advanced BC. Given the broad functional range of the proteins analyzed, immune-related proteins were overrepresented among the observed alterations. Our pilot study supports the emerging role of chemokines in BC progression. Due to the minimally traumatic sampling and clinically important molecular information for therapeutic decisions, this methodology is promising for future immunoscoring and monitoring of treatment efficacy in BC.


Subject(s)
Breast Neoplasms/classification , Breast Neoplasms/immunology , Breast/pathology , Chemokines/metabolism , Neoplasm Proteins/metabolism , Biopsy, Fine-Needle , Breast Neoplasms/pathology , Cohort Studies , Female , Humans , Ki-67 Antigen/metabolism , Neoplasm Grading , Proteomics , Receptors, Estrogen/metabolism , Regression Analysis
2.
Mol Oncol ; 12(9): 1415-1428, 2018 09.
Article in English | MEDLINE | ID: mdl-30019538

ABSTRACT

There are increasing demands for informative cancer biomarkers, accessible via minimally invasive procedures, both for initial diagnostics and to follow-up personalized cancer therapy. Fine-needle aspiration (FNA) biopsy provides ready access to relevant tissues; however, the minute sample amounts require sensitive multiplex molecular analysis to achieve clinical utility. We have applied proximity extension assays (PEA) and NanoString (NS) technology for analyses of proteins and of RNA, respectively, in FNA samples. Using samples from patients with breast cancer (BC, n = 25) or benign lesions (n = 33), we demonstrate that these FNA-based molecular analyses (a) can offer high sensitivity and reproducibility, (b) may provide correct diagnosis in shorter time and at a lower cost than current practice, (c) correlate with results from routine analysis (i.e., benchmarking against immunohistochemistry tests for ER, PR, HER2, and Ki67), and (d) may also help identify new markers related to immunotherapy. A specific 11-protein signature, including FGF binding protein 1, decorin, and furin, distinguished all cancer patient samples from all benign lesions in our main cohort and in smaller replication cohort. Due to the minimally traumatic sampling and rich molecular information, this combined proteomics and transcriptomic methodology is promising for diagnostics and evaluation of treatment efficacy in BC.


Subject(s)
Biomarkers, Tumor/analysis , Breast Neoplasms/chemistry , Breast Neoplasms/diagnosis , Neoplasm Proteins/analysis , Adult , Aftercare , Aged , Aged, 80 and over , Analysis of Variance , Biopsy, Fine-Needle/economics , Breast/pathology , Breast Neoplasms/therapy , Carrier Proteins/analysis , Chemokine CXCL9/analysis , Cohort Studies , Decorin/analysis , Early Diagnosis , Female , Furin/analysis , Heme Oxygenase-1/analysis , Humans , Intercellular Signaling Peptides and Proteins/analysis , Membrane Glycoproteins/analysis , Middle Aged , Receptor, ErbB-2/analysis , Young Adult
3.
Int Urogynecol J Pelvic Floor Dysfunct ; 16(2): 96-103; discussion 103, 2005.
Article in English | MEDLINE | ID: mdl-15372142

ABSTRACT

The aim of the present study was to compare clinical and radiological findings when assessing posterior vaginal wall prolapse. Defecography can be used to complement the clinical evaluation in patients with posterior vaginal wall prolapse. Further development of the defecography technique, using contrast medium in the urinary bladder and intraperitoneally, have resulted in cystodefecoperitoneography (CDP). Thirty-eight women underwent clinical examination using the pelvic organ prolapse quantification system (POP-Q) followed by CDP. All patients answered a standardized bowel function questionnaire. Statistical analysis measuring correlation between POP-Q and CDP using Pearson's correlation coefficient (r) and Spearman's rank order correlation coefficient (rs) demonstrated a poor to moderate correlation, r=0.49 and rs=0.55. Although there was a strong association between large rectoceles (>3 cm) at CDP and symptoms of rectal emptying difficulties (p<0.001), severity and prevalence of bowel dysfunction showed poor coherence with clinical prolapse staging and findings at radiological imaging. Vaginal topography and POP-Q staging predict neither radiological size nor visceral involvement in posterior vaginal wall prolapse. Radiological evaluation may therefore be a useful complement in selected patients.


Subject(s)
Defecography , Peritoneum/diagnostic imaging , Urinary Bladder/diagnostic imaging , Uterine Prolapse/diagnostic imaging , Uterine Prolapse/pathology , Vagina/diagnostic imaging , Adult , Aged , Female , Hernia/etiology , Humans , Middle Aged , Rectocele/etiology , Reproducibility of Results , Uterine Prolapse/complications
4.
Int Urogynecol J Pelvic Floor Dysfunct ; 15(1): 3-9; discussion 9, 2004.
Article in English | MEDLINE | ID: mdl-14752591

ABSTRACT

In patients with genital prolapse involving several compartments simultaneously, radiologic investigation can be used to complement the clinical assessment. Contrast medium in the urinary bladder enables visualization of the bladder base at cystodefecoperitoneography (CDP). The aim of the present study was to evaluate the correlation between clinical examination using the Pelvic Organ Prolapse Quantification system (POP-Q) and CDP. Thirty-three women underwent clinical assessment and CDP. Statistical analysis using Pearson's correlation coefficient ( r) demonstrated a wide variability between the current definition of cystocele at CDP and POP-Q ( r=0.67). An attempt to provide an alternative definition of cystocele at CDP had a similar outcome ( r=0.63). The present study demonstrates a moderate correlation between clinical and radiologic findings in patients with anterior vaginal wall prolapse. It does not support the use of bladder contrast at radiologic investigation in the routine preoperative assessment of patients with genital prolapse.


Subject(s)
Urinary Bladder Diseases/diagnostic imaging , Urinary Bladder Diseases/pathology , Uterine Prolapse/complications , Adult , Aged , Defecography , Diagnosis, Differential , Female , Humans , Middle Aged , Physical Examination , Predictive Value of Tests , Severity of Illness Index , Urinary Bladder Diseases/diagnosis
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