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1.
J Cell Sci ; 131(3)2018 01 29.
Article in English | MEDLINE | ID: mdl-29222112

ABSTRACT

In response to amino acid supply, mTORC1, a master regulator of cell growth, is recruited to the lysosome and activated by the small GTPase Rheb. However, the intracellular localization of Rheb is controversial. In this study, we showed that a significant portion of Rheb is localized on the Golgi but not on the lysosome. GFP-Rheb could activate mTORC1, even when forced to exclusively localize to the Golgi. Likewise, artificial recruitment of mTORC1 to the Golgi allowed its activation. Accordingly, the Golgi was in contact with the lysosome at an newly discovered area of the cell that we term the Golgi-lysosome contact site (GLCS). The number of GLCSs increased in response to amino acid supply, whereas GLCS perturbation suppressed mTORC1 activation. These results suggest that inter-organelle communication between the Golgi and lysosome is important for mTORC1 regulation and the Golgi-localized Rheb may activate mTORC1 at GLCSs.


Subject(s)
Golgi Apparatus/metabolism , Intracellular Membranes/metabolism , Lysosomes/metabolism , Mechanistic Target of Rapamycin Complex 1/metabolism , Ras Homolog Enriched in Brain Protein/metabolism , Amino Acids/pharmacology , Golgi Apparatus/drug effects , Green Fluorescent Proteins/metabolism , HEK293 Cells , HeLa Cells , Humans , Intracellular Membranes/drug effects , Lysosomes/drug effects , Protein Transport/drug effects
2.
Bioorg Med Chem ; 25(13): 3350-3356, 2017 07 01.
Article in English | MEDLINE | ID: mdl-28460887

ABSTRACT

A versatile conjugatable/bioreduction-responsive protecting group for phosphodiester moieties was designed, synthesized and incorporated into oligonucleotide strands. Subsequently, controlled pore glass-supported oligonucleotides were conjugated to a variety of functional molecules using a copper-catalyzed azide-alkyne cycloaddition reaction. The functionalized protecting groups were deprotected by a nitroreductase/NADH reduction system to give "naked" oligonucleotides. This method allowed the synthesis of oligonucleotide prodrugs bearing the functionalized protecting group at the desired sites and desired residues on oligodeoxyribonucleotide (ODN) backbones.


Subject(s)
Alkynes/chemistry , Oligonucleotides/chemical synthesis , Prodrugs/chemical synthesis , Alkynes/metabolism , Molecular Structure , NAD/chemistry , NAD/metabolism , Nitroreductases/chemistry , Nitroreductases/metabolism , Oligonucleotides/chemistry , Oligonucleotides/metabolism , Oxidation-Reduction , Prodrugs/chemistry , Prodrugs/metabolism
3.
J Org Chem ; 82(3): 1796-1802, 2017 02 03.
Article in English | MEDLINE | ID: mdl-28112510

ABSTRACT

An efficient conjugatable and bioreduction cleavable linker was designed and synthesized for the 5'-terminal ends of oligonucleotides. A phosphoramidite reagent bearing this linker was successfully applied to solid phase synthesis and incorporated at the 5'-terminal ends of oligonucleotides. The controlled pore glass (CPG)-supported oligonucleotides were subsequently conjugated to a diverse range of functional molecules using a CuAAC reaction. The synthesized oligonucleotide conjugates were then cleaved using a nitroreductase/NADH bioreduction system to release the naked oligonucleotides.


Subject(s)
Oligonucleotides/chemistry , Molecular Structure , Oxidation-Reduction
4.
Bioconjug Chem ; 27(9): 2149-56, 2016 09 21.
Article in English | MEDLINE | ID: mdl-27598574

ABSTRACT

Cell-permeable oligodeoxyribonucleotides (ODNs) bearing reduction-activated protecting groups were synthesized as oligonucleotide pro-drugs. Although these oligonucleotides were amenable to solid-phase DNA synthesis and purification, the protecting group on their phosphodiester moiety could be readily cleaved by nitroreductase and NADH. Moreover, these compounds exhibited good nuclease resistance against 3'-exonuclease and endonuclease and good stability in human serum. Fluorescein-labeled ODNs modified with reduction-activated protecting groups showed better cellular uptake compared with that of naked ODNs.


Subject(s)
Oligonucleotides/chemical synthesis , Oligonucleotides/metabolism , Base Sequence , Chemistry Techniques, Synthetic , Drug Stability , Humans , NAD/metabolism , Nitroreductases/metabolism , Oligonucleotides/chemistry , Oligonucleotides/genetics , Oxidation-Reduction , Permeability
5.
Bioorg Med Chem Lett ; 26(2): 622-625, 2016 Jan 15.
Article in English | MEDLINE | ID: mdl-26639763

ABSTRACT

We have examined substituted benzyl protecting groups for the phosphodiester in oligodeoxyribonucleotides. Stability of the protecting groups in buffer and rates of deprotection by glutathione (GSH) were strongly influenced by benzyl ring substituents.


Subject(s)
Benzyl Compounds/metabolism , Glutathione/metabolism , Oligodeoxyribonucleotides/metabolism , Prodrugs/metabolism , Benzyl Compounds/chemistry , Oligodeoxyribonucleotides/chemistry , Prodrugs/chemistry
6.
Bioorg Med Chem Lett ; 25(23): 5632-5, 2015 Dec 01.
Article in English | MEDLINE | ID: mdl-26592172

ABSTRACT

Oligonucleotides containing 4-O-(4-NO2-benzyl)thymine residues were synthesized to assess potential prodrug-type action against hypoxic cells. These modified oligonucleotides were incapable of stable duplex formation under non-hypoxic conditions. However, following deprotection of the thymine residues under bioreductive conditions, the deprotected oligonucleotides were able to form stable duplexes with target oligonucleotides.


Subject(s)
Nitrophenols/chemistry , Oligonucleotides/chemistry , Thymine/chemistry , Chromatography, High Pressure Liquid , Hypoxia , Molecular Structure , Oligonucleotides/chemical synthesis , Oxidation-Reduction
7.
Orig Life Evol Biosph ; 45(1-2): 195-205, 2015 Jun.
Article in English | MEDLINE | ID: mdl-25796389

ABSTRACT

In order to investigate impact production of carbonaceous products by asteroids on Titan and other satellites and planets, simulation experiments were carried out using a 2-stage light gas gun. A small polycarbonate or metal bullet with about 6.5 km/s was injected into a pressurized target chamber filled with 1 atm of nitrogen gas, to collide with a ice + iron target or an iron target or a ice + hexane + iron target. After the impact, black soot including fine particles was deposited on the chamber wall. The soot was carefully collected and analyzed by High Performance Liquid Chromatography (HPLC), Fourier Transform Infrared Spectroscopy (FT-IR), and Laser Desorption Time-of-Flight Mass Spectrometry (LD-ToF-MS). As a result of the HPLC analysis, about 0.04-8 pmol of glycine, and a lesser amount of alanine were found in the samples when the ice + hexane + iron target was used. In case of the ice + iron target and the iron target, less amino acids were produced. The identification of the amino acids was also supported by FTIR and LD-ToF-MS analysis.


Subject(s)
Amino Acids/chemistry , Evolution, Chemical , Minor Planets , Planets , Chromatography, High Pressure Liquid , Ice , Iron/chemistry , Mass Spectrometry , Pressure , Soot/analysis , Spectroscopy, Fourier Transform Infrared
8.
Jpn J Physiol ; 53(1): 61-4, 2003 Feb.
Article in English | MEDLINE | ID: mdl-12689359

ABSTRACT

We have developed two new types of bipolar cuff microelectrodes (volume size, 2-3 mm(3)) using electro-conductive rubber or water-absorbent polymer, either of which can be applied to measure sympathetic nerve activity in small animals. A renal nerve bundle of an anesthetized rat was inserted into the center hole of the electrode (diameter, 0.15 mm) through a slit and had good contact with the electrodes. Renal sympathetic nerve activity, which was verified by sympathetic ganglionic blockade, could be recorded using either type of implantable cuff electrode.


Subject(s)
Action Potentials/physiology , Electrodes, Implanted , Kidney/innervation , Kidney/physiology , Microelectrodes , Peripheral Nerves/physiology , Sympathetic Nervous System/physiology , Animals , Equipment Design , Equipment Failure Analysis , Feasibility Studies , Rats
9.
Jpn Heart J ; 43(4): 367-78, 2002 Jul.
Article in English | MEDLINE | ID: mdl-12227712

ABSTRACT

Right bundle branch block and ST segment elevation (RBBB-STE) in the right precordial leads have been reported as a distinct clinical and electrocardiographic syndrome in patients prone to ventricular fibrillation (VF) in the absence of structural heart disease (Brugada syndrome). The purpose of the study was to investigate the role of signal averaged electrocardiogram (SAECG) in identifying patients at high risk among asymptomatic RBBB-STE patients. Thirteen patients with the RBBB-STE ECG were identified. Symptoms were: syncope (n=3, cases 1, 3, and 11), atypical chest pain (n=3, cases 4, 10, and 12) and palpitations (n=2, cases 6, and 7). The other 5 patients were asymptomatic. SAECG and programmed electrical stimulation (PES) were conducted in all patients. Body surface late potentials (LPs) were present in 7 of 13 patients before PES. Vf was induced in 6 of 7 LP positive patients. Vf was induced in 3 of 6 LP negative patients, but LP became positive in 2 of 3 patients in whom Vf was induced. One patient with syncope due to VF (case 1), 1 patient without symptoms who died suddenly during follow up (case 2), and 1 asymptomatic patient (case 9) showed reproducibly positive LP. In a patient (case 9) with positive LP at baseline, LP transiently became negative during follow up. In RBBB-STE patients, reproducibly positive LP is at risk for malignant ventricular arrhythmias and sudden death. Repeated SAECG recording may be useful for screening high-risk patients who should receive electrophysiological study among asymptomatic RBBB-STE patients.


Subject(s)
Bundle-Branch Block/physiopathology , Electrocardiography , Ventricular Fibrillation/physiopathology , Adult , Aged , Body Surface Potential Mapping , Bundle-Branch Block/therapy , Chest Pain/complications , Defibrillators, Implantable , Electric Stimulation , Electrophysiology , Female , Humans , Male , Middle Aged , Syncope/complications , Syndrome
10.
J Org Chem ; 62(9): 2877-2884, 1997 May 02.
Article in English | MEDLINE | ID: mdl-11671651

ABSTRACT

The dihydrobenzoxazone 9e, which is easily prepared from salicylamide 11 and cyclohexanone, serves as an efficient auxiliary in the synthesis of the 1-beta-methylcarbapenem key intermediate 10. The stereocontrolled Reformatsky-type reactions of the acetoxyazetidinone 2 with the carboximides 6 gave the intermediates 7 with high diastereoselectivities in high chemical yields. The auxiliary 9e also acts as a good leaving group in the TMSCl-promoted Dieckmann-type cyclization leading to a 1-beta-methylcarbapenem skeleton. By using this auxiliary, 10 was synthesized in 58% overall yield and four steps from 2.

11.
Dev Growth Differ ; 15(3): 201-216, 1973 Oct.
Article in English | MEDLINE | ID: mdl-37280800

ABSTRACT

Properties of ovacquenin, a reaggregation-promoting substance from sea urchin embryos, were further studied and compared with those of hyalin, a calcium-insoluble protein of the hyaline layer surrounding the sea urchin embryo. Properties of hyalin were basically in agreement with previous reports, but differed in some aspects. Hyalin and ovacquenin were very similar in various aspects and were hard to distiguish generally, but they were separated by ammonium sulfate fractionation. Hyalin was precipitated at a low salt concentration, while ovacquenin remained soluble until the salt concentration exceeded half saturation. Therefore it was concluded that hyalin and ovacquenin are very much alike but distinct from each other. Probable relation of ovacquenin to hyalin was discussed.

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