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1.
J Natl Cancer Inst ; 2024 Apr 16.
Article in English | MEDLINE | ID: mdl-38627241

ABSTRACT

Adolescents and Young Adults (AYAs: 15-39 y) with cancer face unique vulnerabilities, yet remain under-represented on clinical trials, including adult registries of COVID-19 in cancer (AYAs: 8-12%). Thus, we leveraged the Pediatric Oncology COVID-19 Case Report (POCC) to examine the clinical course of COVID-19 among AYAs with cancer. POCC collects de-identified clinical and sociodemographic data regarding 0-39yo with cancer (AYAs = 37%) and COVID-19 from >100 institutions. Between 04/01/2020-11/28/2023, 191 older AYAs [22-39y] and 640 younger AYAs [15-21y] were captured. Older AYAs were less often hospitalized (p < .001), admitted to the intensive care unit (ICU, p = .02), and/or required respiratory support (p = .057). In multivariable analyses, older AYAs faced 80% lower odds of ICU admission but 2.3-times greater odds of changes to cancer-directed therapy. Unvaccinated patients had 5.4-times higher odds of ICU admission. Among AYAs with cancer, the COVID-19 course varies by age. These findings can inform pediatric/adult oncology teams surrounding COVID-19 management and prevention.

2.
PLoS One ; 18(2): e0271505, 2023.
Article in English | MEDLINE | ID: mdl-36735656

ABSTRACT

Cell free DNA (cfDNA) and circulating tumor cell free DNA (ctDNA) from blood (plasma) are increasingly being used in oncology for diagnosis, monitoring response, identifying cancer causing mutations and detecting recurrences. Circulating tumor RB1 DNA (ctDNA) is found in the blood (plasma) of retinoblastoma patients at diagnosis before instituting treatment (naïve). We investigated ctDNA in naïve unilateral patients before enucleation and during enucleation (6 patients/ 8 mutations with specimens collected 5-40 minutes from severing the optic nerve) In our cohort, following transection the optic nerve, ctDNA RB1 VAF was measurably lower than pre-enucleation levels within five minutes, 50% less within 15 minutes and 90% less by 40 minutes.


Subject(s)
Cell-Free Nucleic Acids , Circulating Tumor DNA , Retinal Neoplasms , Retinoblastoma , Humans , Circulating Tumor DNA/genetics , Retinoblastoma/genetics , Retinoblastoma/surgery , Pilot Projects , Eye Enucleation , Mutation , Retinal Neoplasms/genetics , Retinal Neoplasms/surgery , Biomarkers, Tumor/genetics , Ubiquitin-Protein Ligases/genetics , Retinoblastoma Binding Proteins/genetics
4.
Ophthalmol Sci ; 1(1): 100015, 2021 Mar.
Article in English | MEDLINE | ID: mdl-36246006

ABSTRACT

Purpose: Analysis of circulating tumor DNA (ctDNA) in the plasma of patients with retinoblastoma and simulating lesions. Design: Retrospective cross-sectional study of the association of plasma ctDNA from retinoblastoma and simulating lesions with disease course. Participants: Fifty-eight Memorial Sloan Kettering Cancer Center patients with retinoblastoma comprising 68 plasma ctDNA samples and 5 with retinoblastoma-simulating lesions. Methods: The ctDNA analyzed with hybridization capture and next-generation sequencing in blood (plasma) of patients who had retinoblastoma or simulating lesions were evaluated for association with clinical course of the disease. Main Outcome Measures: Presence or absence of molecular aberrations in the RB1 gene and correlations with clinical features. Results: RB1 cell-free DNA (cfDNA) was detected in 16 of 19 patients with newly diagnosed, untreated intraocular retinoblastoma and in 3 of 3 patients with newly diagnosed, untreated metastatic disease. It was also present in 3 patients with recurrent intraocular disease before therapy, but was not present in patients with recurrent disease who received intra-arterial chemotherapy, nor in 21 patients who had undergone enucleation for unilateral disease. In 1 patient who had delayed treatment (insurance reasons) and showed rapid growth of the intraocular tumor, the variant allele frequency increased in 1 month from 0.34% to 2.48%. No RB1 mutations were detected in the cfDNA from plasma of patients with simulating lesions (3 with Coats disease and 1 with persistent fetal vasculature [PFV]). In 2 patients, we identified 2 independent RB1 mutations in plasma. Conclusions: Mutations in RB1 were found in the cfDNA from blood of patients with newly diagnosed, untreated retinoblastoma and in patients who showed disease recurrence in the eye after prior treatment, but not in unilateral retinoblastoma after enucleation Levels of ctDNA increase in patients with progressive disease who did not receive any treatment. High plasma cfDNA levels were detected in patients with newly diagnosed metastatic disease, and these levels decreased after systemic chemotherapy was administered. Further validation is needed for measuring the somatic alterations in cfDNA from blood in retinoblastoma that could provide a promising method of monitoring patients in the future.

5.
Pediatr Blood Cancer ; 68(3): e28843, 2021 03.
Article in English | MEDLINE | ID: mdl-33338306

ABSTRACT

PURPOSE: Pediatric oncology patients undergoing active chemotherapy are suspected to be at a high risk for severe disease secondary to severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) infection; however, data to support this are lacking. We aim to describe the characteristics of coronavirus disease 2019 (COVID-19) in this population and also its impact on pediatric cancer care in the New York region during the peak of the pandemic. PATIENTS AND METHODS: This multicenter, retrospective study included 13 institutions. Clinical and laboratory information on 98 patients ≤21 years of age receiving active anticancer therapy, who tested positive for SARS-CoV-2 by nasopharyngeal swab polymerase chain reaction (PCR), was collected. RESULTS: Of the 578 pediatric oncology patients tested for COVID-19, 98 were positive, of whom 73 were symptomatic. Most experienced mild disease, 28 required inpatient management, 25 needed oxygen support, and seven required mechanical ventilation. There is a slightly higher risk of severe disease in males and obese patients, though not statistically significant. Persistent lymphopenia was noted in severe cases. Delays in cancer therapy occurred in 67% of SARS-CoV-2-positive patients. Of four deaths, none were solely attributable to COVID-19. The impact of the pandemic on pediatric oncology care was significant, with 54% of institutions reporting delays in chemotherapy, 46% delays in surgery, and 30% delays in transplant. CONCLUSION: In this large multi-institutional cohort, we observed that mortality and morbidity from COVID-19 amongst pediatric oncology patients were low overall, but higher than reported in general pediatrics. Certain subgroups might be at higher risk of severe disease. Delays in cancer care due to SARS-CoV-2 remain a concern.


Subject(s)
Antineoplastic Agents/therapeutic use , COVID-19/epidemiology , Neoplasms/mortality , Neoplasms/therapy , Severity of Illness Index , Adolescent , Antineoplastic Agents/adverse effects , COVID-19/pathology , Child , Child, Preschool , Female , Humans , Male , Retrospective Studies , Risk Factors , SARS-CoV-2
6.
Cancer Med ; 9(17): 6093-6101, 2020 09.
Article in English | MEDLINE | ID: mdl-32633890

ABSTRACT

PURPOSE: The enucleation rate for retinoblastoma has dropped from over 95% to under 10% in the past 10 years as a result of improvements in therapy. This reduces access to tumor tissue for molecular profiling, especially in unilateral retinoblastoma, and hinders the confirmation of somatic RB1 mutations necessary for genetic counseling. Plasma cell-free DNA (cfDNA) has provided a platform for noninvasive molecular profiling in cancer, but its applicability in low tumor burden retinoblastoma has not been shown. We analyzed cfDNA collected from 10 patients with available tumor tissue to determine whether sufficient tumorderived cfDNA is shed in plasma from retinoblastoma tumors to enable noninvasive RB1 mutation detection. METHODS: Tumor tissue was collected from eye enucleations in 10 patients diagnosed with advanced intra-ocular unilateral retinoblastoma, three of which went on to develop metastatic disease. Tumor RB1 mutation status was determined using an FDA-cleared tumor sequencing assay, MSK-IMPACT. Plasma samples were collected before eye enucleation and analyzed with a customized panel targeting all exons of RB1. RESULTS: Tumor-guided genotyping detected 10 of the 13 expected somatic RB1 mutations in plasma cfDNA in 8 of 10 patients (average variant allele frequency 3.78%). Without referring to RB1 status in the tumor, de novo mutation calling identified 7 of the 13 expected RB1 mutations (in 6 of 10 patients) with high confidence. CONCLUSION: Plasma cfDNA can detect somatic RB1 mutations in patients with unilateral retinoblastoma. Since intraocular biopsies are avoided in these patients because of concern about spreading tumor, cfDNA can potentially offer a noninvasive platform to guide clinical decisions about treatment, follow-up schemes, and risk of metastasis.


Subject(s)
Circulating Tumor DNA/genetics , Genes, Retinoblastoma/genetics , Retinal Neoplasms/genetics , Retinoblastoma/genetics , Cancer Care Facilities , Child, Preschool , Circulating Tumor DNA/blood , DNA Mutational Analysis/methods , Exons/genetics , Eye Enucleation , Feasibility Studies , Genotyping Techniques , Humans , Infant , Infant, Newborn , New York City , Retinal Neoplasms/blood , Retinal Neoplasms/therapy , Retinoblastoma/blood , Retinoblastoma/therapy
7.
J Hazard Mater ; 385: 121559, 2020 03 05.
Article in English | MEDLINE | ID: mdl-31732344

ABSTRACT

Adsorption is a widely used process for removal of heavy metals, but the management of spent adsorbent containing concentrated amounts of heavy metals is a problem due to potential risk of groundwater contamination from leaching of heavy metals. Generally, cementitious binder and additives are used for stabilization and solidification treatment, however heavy metals tend to leach from such matrices. Therefore, this research investigated the effectiveness of chemically modified phosphate biochar (CMPB) composite for the simultaneous solidification and stabilization of arsenic (As) and iron (Fe) contaminated canola meal biochar. Results showed that the performance of spent biochar added CMPB composites was significantly better than the pure composites (without biochar) due to filling of inter-aggregate pores using biochar and availability of sufficient amount of MgKPO4 for binding of biochar particles. Moreover, leaching test and risk assessment studies indicated that there is no potential adverse effect as the concentrations of As and Fe in TCLP leachate were well below the Universal Treatment Standard (UTS) in optimized CMPB composites. In conclusion, chemically modified phosphate binders were found effective in stabilization and solidification of As and Fe contaminated biochar into thermodynamically stable material with high immobilization capacity and low leachability.


Subject(s)
Arsenic/chemistry , Charcoal/chemistry , Iron/chemistry , Phosphates/chemistry , Water Pollutants, Chemical/chemistry , Adsorption , Arsenic/analysis , Brassica napus/chemistry , Calcium Compounds/chemistry , Iron/analysis , Magnesium Oxide/chemistry , Oxides/chemistry , Risk Assessment , Water Pollutants, Chemical/analysis
8.
J Pathol ; 244(5): 616-627, 2018 04.
Article in English | MEDLINE | ID: mdl-29380875

ABSTRACT

Over the past decade, advances in molecular biology and genomics techniques have revolutionized the diagnosis and treatment of cancer. The technological advances in tissue profiling have also been applied to the study of cell-free nucleic acids, an area of increasing interest for molecular pathology. Cell-free nucleic acids are released from tumour cells into the surrounding body fluids and can be assayed non-invasively. The repertoire of genomic alterations in circulating tumour DNA (ctDNA) is reflective of both primary tumours and distant metastatic sites, and ctDNA can be sampled multiple times, thereby overcoming the limitations of the analysis of single biopsies. Furthermore, ctDNA can be sampled regularly to monitor response to treatment, to define the evolution of the tumour genome, and to assess the acquisition of resistance and minimal residual disease. Recently, clinical ctDNA assays have been approved for guidance of therapy, which is an exciting first step in translating cell-free nucleic acid research tests into clinical use for oncology. In this review, we discuss the advantages of cell-free nucleic acids as analytes in different body fluids, including blood plasma, urine, and cerebrospinal fluid, and their clinical applications in solid tumours and haematological malignancies. We will also discuss practical considerations for clinical deployment, such as preanalytical factors and regulatory requirements. Copyright © 2018 Pathological Society of Great Britain and Ireland. Published by John Wiley & Sons, Ltd.


Subject(s)
Biomarkers, Tumor/genetics , Circulating Tumor DNA/genetics , Genomics/methods , Neoplasms/genetics , Neoplasms/pathology , Pathology, Molecular/methods , Early Detection of Cancer/methods , Genetic Predisposition to Disease , Humans , Liquid Biopsy , Neoplasms/therapy , Phenotype , Predictive Value of Tests , Prognosis
9.
J Prosthet Dent ; 110(5): 429-32, 2013 Nov.
Article in English | MEDLINE | ID: mdl-23998621

ABSTRACT

Oral carcinoma destroys structures, including the maxilla and mandible, which often require surgical management and rehabilitation. Poor tissue support after mandibular reconstruction in patients with hemimandibular defects hinders the reconstruction of functional and stable mandibular guide flange prostheses. The fabrication and use of a fixed guide flange prosthesis for rehabilitating patients with hemimandibular defects is described. The device permitted the use of the same prosthesis for both the functional and mechanical correction of mandibular deviation and is indicated where the fabrication of other appliances is contraindicated because of the compromised oral and physical state of the patient.


Subject(s)
Dental Occlusion, Centric , Mandible/surgery , Orthodontic Appliance Design , Orthodontic Appliances, Functional , Centric Relation , Humans , Muscle Stretching Exercises , Orthodontic Brackets , Orthodontic Wires
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