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1.
Gut ; 65(6): 907-13, 2016 06.
Article in English | MEDLINE | ID: mdl-26701877

ABSTRACT

OBJECTIVE: Barrett's oesophagus commonly presents as a patchwork of columnar metaplasia with and without goblet cells in the distal oesophagus. The presence of metaplastic columnar epithelium with goblet cells on oesophageal biopsy is a marker of cancer progression risk, but it is unclear whether clonal expansion and progression in Barrett's oesophagus is exclusive to columnar epithelium with goblet cells. DESIGN: We developed a novel method to trace the clonal ancestry of an oesophageal adenocarcinoma across an entire Barrett's segment. Clonal expansions in Barrett's mucosa were identified using cytochrome c oxidase enzyme histochemistry. Somatic mutations were identified through mitochondrial DNA sequencing and single gland whole exome sequencing. RESULTS: By tracing the clonal origin of an oesophageal adenocarcinoma across an entire Barrett's segment through a combination of histopathological spatial mapping and clonal ordering, we find that this cancer developed from a premalignant clonal expansion in non-dysplastic ('cardia-type') columnar metaplasia without goblet cells. CONCLUSION: Our data demonstrate the premalignant potential of metaplastic columnar epithelium without goblet cells in the context of Barrett's oesophagus.


Subject(s)
Adenocarcinoma/pathology , Barrett Esophagus/complications , Esophageal Neoplasms/pathology , Goblet Cells/pathology , Biopsy , Electron Transport Complex IV , Epithelium/pathology , Exome , Female , Humans , Metaplasia/pathology , Middle Aged , Mitochondria , Mutation , Sequence Analysis, DNA
2.
Cell Mol Gastroenterol Hepatol ; 1(1): 41-54, 2015 Jan.
Article in English | MEDLINE | ID: mdl-28247864

ABSTRACT

Barrett's esophagus is characterized by the erosive replacement of esophageal squamous epithelium by a range of metaplastic glandular phenotypes. These glandular phenotypes likely change over time, and their distribution varies along the Barrett's segment. Although much recent work has addressed Barrett's esophagus from the genomic viewpoint-its genotype space-the fact that the phenotype of Barrett's esophagus is nonstatic points to conversion between phenotypes and suggests that Barrett's esophagus also exists in phenotype space. Here we explore this latter concept, investigating the scope of glandular phenotypes in Barrett's esophagus and how they exist in physical and temporal space as well as their evolution and their life history. We conclude that individual Barrett's glands are clonal units; because of this important fact, we propose that it is the Barrett's gland that is the unit of selection in phenotypic and indeed neoplastic progression. Transition between metaplastic phenotypes may be governed by neutral drift akin to niche turnover in normal and dysplastic niches. In consequence, the phenotype of Barrett's glands assumes considerable importance, and we make a strong plea for the integration of the Barrett's gland in both genotype and phenotype space in future work.

3.
Gut ; 63(12): 1854-63, 2014 Dec.
Article in English | MEDLINE | ID: mdl-24550372

ABSTRACT

OBJECTIVE: Barrett's oesophagus shows appearances described as 'intestinal metaplasia', in structures called 'crypts' but do not typically display crypt architecture. Here, we investigate their relationship to gastric glands. METHODS: Cell proliferation and migration within Barrett's glands was assessed by Ki67 and iododeoxyuridine (IdU) labelling. Expression of mucin core proteins (MUC), trefoil family factor (TFF) peptides and LGR5 mRNA was determined by immunohistochemistry or by in situ hybridisation, and clonality was elucidated using mitochondrial DNA (mtDNA) mutations combined with mucin histochemistry. RESULTS: Proliferation predominantly occurs in the middle of Barrett's glands, diminishing towards the surface and the base: IdU dynamics demonstrate bidirectional migration, similar to gastric glands. Distribution of MUC5AC, TFF1, MUC6 and TFF2 in Barrett's mirrors pyloric glands and is preserved in Barrett's dysplasia. MUC2-positive goblet cells are localised above the neck in Barrett's glands, and TFF3 is concentrated in the same region. LGR5 mRNA is detected in the middle of Barrett's glands suggesting a stem cell niche in this locale, similar to that in the gastric pylorus, and distinct from gastric intestinal metaplasia. Gastric and intestinal cell lineages within Barrett's glands are clonal, indicating derivation from a single stem cell. CONCLUSIONS: Barrett's shows the proliferative and stem cell architecture, and pattern of gene expression of pyloric gastric glands, maintained by stem cells showing gastric and intestinal differentiation: neutral drift may suggest that intestinal differentiation advances with time, a concept critical for the understanding of the origin and development of Barrett's oesophagus.


Subject(s)
Barrett Esophagus , Esophagus , Mucin 5AC/metabolism , Peptides/metabolism , Receptors, G-Protein-Coupled/metabolism , Stem Cells/physiology , Barrett Esophagus/metabolism , Barrett Esophagus/pathology , Biomarkers, Tumor/metabolism , Cell Movement , Cell Proliferation , Disease Progression , Esophagus/metabolism , Esophagus/pathology , Gastric Mucosa/metabolism , Gene Expression Profiling , Goblet Cells/metabolism , Humans , Idoxuridine , Immunohistochemistry , Ki-67 Antigen/immunology , Nucleic Acid Synthesis Inhibitors , Trefoil Factor-2 , Trefoil Factor-3
4.
Development ; 140(7): 1537-49, 2013 Apr.
Article in English | MEDLINE | ID: mdl-23482489

ABSTRACT

Wnt signalling is a key regulator of vertebrate heart development, yet it is unclear which specific Wnt signalling components are required to regulate which aspect of cardiogenesis. Previously, we identified Wnt6 as an endogenous Wnt ligand required for controlling heart muscle differentiation via canonical Wnt/ß-catenin signalling. Here we show for the first time a requirement for an endogenous Wnt signalling inhibitor for normal heart muscle differentiation. Expression of sfrp1 is strongly induced in differentiating heart muscle. We show that sfrp1 is not only able to promote heart muscle differentiation but is also required for the formation of normal size heart muscle in the embryo. sfrp1 is functionally able to inhibit Wnt6 signalling and its requirement during heart development relates to relieving the cardiogenesis-restricting function of endogenous wnt6. In turn, we discover that sfrp1 expression in the heart is regulated by Wnt6 signalling, which for the first time indicates that sfrp genes can function as part of a Wnt negative-feedback regulatory loop. Our experiments indicate that sfrp1 controls the size of the differentiating heart muscle primarily by regulating cell fate within the cardiac mesoderm between muscular and non-muscular cell lineages. The cardiac mesoderm is therefore not passively patterned by signals from the surrounding tissue, but regulates its differentiation into muscular and non-muscular tissue using positional information from the surrounding tissue. This regulatory network might ensure that Wnt activation enables expansion and migration of cardiac progenitors, followed by Wnt inhibition permitting cardiomyocyte differentiation.


Subject(s)
Cell Differentiation/genetics , Feedback, Physiological/physiology , Glycoproteins/physiology , Myocytes, Cardiac/physiology , Wnt Signaling Pathway/genetics , Xenopus , Animals , Animals, Genetically Modified , Base Sequence , Embryo, Nonmammalian , Gene Expression Regulation, Developmental/genetics , Glycoproteins/genetics , Glycoproteins/metabolism , Heart/embryology , Intracellular Signaling Peptides and Proteins , Myocardium/metabolism , Myocytes, Cardiac/metabolism , Organogenesis/genetics , Organogenesis/physiology , Xenopus/embryology , Xenopus/genetics , Xenopus/metabolism , Xenopus/physiology
5.
Methods Mol Biol ; 469: 335-61, 2008.
Article in English | MEDLINE | ID: mdl-19109719

ABSTRACT

Determining the expression pattern of a gene of interest is critical to understanding when, where, and how it may function during development. This chapter describes methods for determining the localization and expression levels for both mRNA and protein. Some of these methods can be described as quantitative or semi-quantitative while others are considered more qualitative in nature. To determine the spatial localization of mRNA expression, RNA in situ hybridization can be used on both whole-mount or sectioned embryos. Northern blot and qPCR are more quantitative methods for analyzing mRNA expression levels. For determining protein localization, antibody staining either by immunocytochemistry or immunofluorescence can be performed on both whole-mount or sectioned embryos; whereas Western blot is the method generally used for quantifying protein expression levels.


Subject(s)
Gene Expression Regulation, Developmental , Immunohistochemistry/methods , In Situ Hybridization/methods , Xenopus laevis , Animals , Gene Expression Profiling/methods , RNA/genetics , RNA/metabolism , Xenopus laevis/embryology , Xenopus laevis/genetics
6.
Methods Mol Biol ; 469: 401-15, 2008.
Article in English | MEDLINE | ID: mdl-19109722

ABSTRACT

Xenopus embryos are particularly suited for functional experiments to investigate vertebrate embryonic development. Due to the large size of embryos and their development outside of the mother organism, they are very accessible, easy to manipulate, and allow for immediate observation of developmental phenotypes. Powerful methods have been established for both gain- and loss-of-function strategies, which build on these inherent advantages. This chapter describes injection methods used to overexpress gene products and inhibit gene expression as well as pharmacological approaches to manipulate Wnt signaling in Xenopus embryos.


Subject(s)
Gene Expression Regulation, Developmental , Microinjections/methods , Xenopus laevis/embryology , Animals , Microinjections/instrumentation , Oligonucleotides, Antisense/genetics , Oligonucleotides, Antisense/metabolism , RNA, Messenger/genetics , RNA, Messenger/metabolism , Signal Transduction/physiology , Wnt Proteins/genetics , Wnt Proteins/metabolism , Xenopus Proteins/genetics , Xenopus Proteins/metabolism , Xenopus laevis/physiology
7.
Methods Mol Biol ; 469: 431-49, 2008.
Article in English | MEDLINE | ID: mdl-19109724

ABSTRACT

Xenopus laevis has for many years been successfully used to study Wnt signaling during early development. However, because loss of function and gain of function experiments generally involve injecting RNA, DNA, or morpholinos into early embryos (1- to 32-cell), major phenotypes are often observed before the embryo has reached later stages of development. The combined use of transgenics and a heat shock inducible system has overcome these problems and enables investigations of Wnt signaling at later stages of Xenopus embryonic development, including organogenesis.


Subject(s)
Animals, Genetically Modified , Gene Expression Regulation, Developmental , Gene Transfer Techniques , Xenopus laevis/embryology , Xenopus laevis/genetics , Animals , Female , Heat-Shock Proteins/genetics , Heat-Shock Proteins/metabolism , Nuclear Transfer Techniques , Oocytes/chemistry , Oocytes/metabolism , Signal Transduction/physiology , Transgenes , Wnt Proteins/genetics , Wnt Proteins/metabolism , Xenopus Proteins/genetics , Xenopus Proteins/metabolism , Xenopus laevis/metabolism
8.
Dev Biol ; 323(2): 177-88, 2008 Nov 15.
Article in English | MEDLINE | ID: mdl-18804460

ABSTRACT

Mesodermal tissue with heart forming potential (cardiogenic mesoderm) is induced during gastrulation. This cardiogenic mesoderm later differentiates into heart muscle tissue (myocardium) and non-muscular heart tissue. Inhibition of Wnt/beta-catenin signaling is known to be required early for induction of cardiogenic mesoderm; however, the identity of the inhibiting Wnt signal itself is still elusive. We have identified Wnt6 in Xenopus as an endogenous Wnt signal, which is expressed in tissues close to and later inside the developing heart. Our loss-of-function experiments show that Wnt6 function is required in the embryo to prevent development of an abnormally large heart muscle. We find, however, that Wnt6 is not required as expected during gastrulation stages, but later during organogenesis stages just before cells of the cardiogenic mesoderm begin to differentiate into heart muscle (myocardium). Our gain-of-function experiments show that Wnt6 and also activated canonical Wnt/beta-catenin signaling are capable of restricting heart muscle development at these relatively late stages of development. This repressive role of Wnt signaling is mediated initially via repression of cardiogenic transcription factors, since reinstatement of GATA function can rescue expression of other cardiogenic transcription factors and downstream cardiomyogenic differentiation genes.


Subject(s)
Heart/embryology , Organogenesis , Signal Transduction , Wnt Proteins/metabolism , Xenopus Proteins/metabolism , Xenopus/embryology , Animals , Biomarkers/metabolism , Embryo, Nonmammalian/metabolism , GATA Transcription Factors/genetics , GATA Transcription Factors/metabolism , Gene Expression Regulation, Developmental , Genes, Developmental , Heart/anatomy & histology , Myocardium/metabolism , Organ Size , beta Catenin/metabolism
9.
Dev Dyn ; 237(3): 768-79, 2008 Mar.
Article in English | MEDLINE | ID: mdl-18224714

ABSTRACT

Here, we report the localization within embryonic tissues of xWnt6 protein; together with the temporal and spatial expression of Xenopus laevis Wnt6 mRNA. Wnt6 expression in Xenopus embryos is low until later stages of neurulation, when it is predominantly found in the surface ectoderm. Wnt6 expression increases during early organogenesis in the epidermis overlaying several developing organs, including the eye, heart, and pronephros. At later stages of development, Wnt6 mRNA and protein generally localize in epithelial tissues and specifically within the epithelial tissues of these developing organs. Wnt6 localization correlates closely with sites of both epithelial to mesenchymal transformations and mesenchymal to epithelial transformations. Xenopus Wnt6 sequence and its expression pattern are highly conserved with other vertebrates. Xenopus embryos, therefore, provide an excellent model system for investigating the function of vertebrate Wnt6 in organ development and regulation of tissue architecture.


Subject(s)
Embryo, Nonmammalian/metabolism , Epidermis/embryology , Epithelium/embryology , Organogenesis , Wnt Proteins/metabolism , Xenopus Proteins/metabolism , Xenopus laevis/embryology , Amino Acid Sequence , Animals , Base Sequence , Cloning, Molecular , Epidermal Cells , Epidermis/metabolism , Epithelial Cells/metabolism , Epithelium/metabolism , Gene Expression Regulation, Developmental , Molecular Sequence Data , RNA, Messenger/genetics , RNA, Messenger/metabolism , Sequence Alignment , Wnt Proteins/chemistry , Wnt Proteins/genetics , Xenopus Proteins/chemistry , Xenopus Proteins/genetics , Xenopus laevis/metabolism
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