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1.
mBio ; 10(6)2019 12 03.
Article in English | MEDLINE | ID: mdl-31796536

ABSTRACT

Conjugation of small ubiquitin-like modifiers (SUMOs) to substrate proteins is a posttranslational protein modification that affects a diverse range of physiological processes. Global inhibition of SUMO conjugation in mice results in embryonic lethality, reflecting the importance of the SUMO pathways for embryonic development. Here, we demonstrated that SUMO1 overexpression was not well tolerated in murine embryonic carcinoma and embryonic stem (ES) cells and that only a few clones were recovered after transduction with vectors delivering SUMO1 expression constructs. Differentiated NIH/3T3 cells overexpress SUMO1 without deleterious effects and maintain high levels of both conjugated and free forms of SUMO1. The few embryonic cells surviving after forced overexpression retained all their SUMO1 in the form of a few high-molecular-weight conjugates and maintained undetectable levels of free SUMO1. The absence of free SUMO in embryonic cells was seen specifically upon overexpression of SUMO1, but not SUMO2. Moreover, blocking SUMO1 conjugation to endogenous substrates by C-terminal mutations of SUMO1 or by overexpression of a SUMO1 substrate "sponge" or by overexpression of the deSUMOylating enzyme SUMO-specific peptidase 1 (SENP1) dramatically restored free SUMO1 overexpression. The data suggest that overexpression of SUMO1 protein leading to an excess accumulation of critical SUMO1-conjugated substrates is not tolerated in embryonic cells. Surviving embryonic cells exhibit SUMO1 conjugation to allowed substrates but a complete absence of free SUMO1.IMPORTANCE Embryonic stem (ES) cells exhibit unusual transcriptional, proteomic, and signal response profiles, reflecting their unusual needs for rapid differentiation and replication. The work reported here demonstrated that mouse embryonic cell lines did not tolerate the overexpression of SUMO1, the small ubiquitin-like modifier protein that is covalently attached to many substrates to alter their intracellular localization and functionality. Forced SUMO1 overexpression is toxic to ES cells, and surviving cell populations adapt by dramatically reducing the levels of free SUMO1. Such a response is not seen in differentiated cells or with SUMO2 or with nonconjugatable SUMO1 mutants or in the presence of a SUMO1 "sponge" substrate that accepts the modification. The findings suggest that excess SUMO1 modification of specific substrates is not tolerated by embryonic cells and highlight a distinctive need for these cells to control the levels of SUMO1 available for conjugation.


Subject(s)
Embryonic Development/genetics , Gene Expression Regulation, Developmental/genetics , SUMO-1 Protein/metabolism , Animals , Cell Line , Cysteine Endopeptidases/genetics , Endopeptidases/genetics , HEK293 Cells , Humans , Mice , Mutation , NIH 3T3 Cells , Protein Processing, Post-Translational/genetics , Proteomics/methods , Sumoylation/genetics , Ubiquitins/metabolism
2.
Virology ; 516: 165-175, 2018 03.
Article in English | MEDLINE | ID: mdl-29407374

ABSTRACT

Moloney Murine Leukemia Virus (M-MLV) proviral DNA is transcriptionally silenced in embryonic cells by a large repressor complex tethered to the provirus by two sequence-specific DNA binding proteins, ZFP809 and YY1. A central component of the complex is Trim28, a scaffold protein that regulates many target genes involved in cell cycle progression, DNA damage responses, and viral gene expression. The silencing activity of Trim28, and its interactions with corepressors are often regulated by post-translational modifications such as sumoylation and phosphorylation. We defined the interaction domains of Trim28 and YY1, and investigated the role of sumoylation and phosphorylation of Trim28 in mediating M-MLV silencing. The RBCC domain of Trim28 was sufficient for interaction with YY1, and acidic region 1 and zinc fingers of YY1 were necessary and sufficient for its interaction with Trim28. Additionally, we found that residue K779 was critical for Trim28-mediated silencing of M-MLV in embryonic cells.


Subject(s)
Moloney murine leukemia virus/physiology , Proviruses/genetics , Retroviridae Infections/veterinary , Rodent Diseases/metabolism , Tripartite Motif-Containing Protein 28/metabolism , YY1 Transcription Factor/metabolism , Amino Acid Motifs , Animals , Gene Silencing , Mice , Moloney murine leukemia virus/genetics , Protein Binding , Protein Domains , Proviruses/metabolism , Retroviridae Infections/genetics , Retroviridae Infections/metabolism , Retroviridae Infections/virology , Rodent Diseases/genetics , Rodent Diseases/virology , Tripartite Motif-Containing Protein 28/chemistry , Tripartite Motif-Containing Protein 28/genetics , YY1 Transcription Factor/chemistry , YY1 Transcription Factor/genetics
3.
Growth Factors ; 32(6): 223-35, 2014 Dec.
Article in English | MEDLINE | ID: mdl-25413948

ABSTRACT

EphA3 is expressed in solid tumors and leukemias and is an attractive target for the therapy. We have generated a panel of Humaneered® antibodies to the ligand-binding domain using a Fab epitope-focused library that has the same specificity as monoclonal antibody mIIIA4. A high-affinity antibody was selected that competes with the mIIIA4 antibody for binding to EphA3 and has an improved affinity of ∼1 nM. In order to generate an antibody with potent cell-killing activity the variable regions were assembled with human IgG1k constant regions and expressed in a Chinese hamster ovary (CHO) cell line deficient in fucosyl transferase. Non-fucosylated antibodies have been reported to have enhanced binding affinity for the IgG receptor CD16a (FcγRIIIa). The affinity of the antibody for recombinant CD16a was enhanced approximately 10-fold. This resulted in enhanced antibody-dependent cell-mediated cytotoxicity (ADCC) activity against EphA3-expressing leukemic cells, providing a potent antibody for the evaluation as a therapeutic agent.


Subject(s)
Antibodies, Monoclonal/immunology , Antibody Affinity , Antibody-Dependent Cell Cytotoxicity , Receptor, EphA3/immunology , Amino Acid Sequence , Animals , Antibodies, Monoclonal/genetics , CHO Cells , Cricetinae , Cricetulus , Humans , Immunoglobulin Fc Fragments/immunology , Macaca mulatta , Molecular Sequence Data , Receptors, IgG/immunology , Recombinant Proteins/genetics , Recombinant Proteins/immunology
4.
Cell Rep ; 4(1): 50-8, 2013 Jul 11.
Article in English | MEDLINE | ID: mdl-23810560

ABSTRACT

Embryonic cells transcriptionally repress the expression of endogenous and exogenous retroelements. Trim28, a key player in this silencing, is known to act in a large DNA-bound complex, but the other components of the complex are not fully characterized. Here, we show that the zinc finger protein Yin Yang 1 (YY1) is one such component. YY1 binds to the long terminal repeat (LTR) region of both exogenous and endogenous retroviruses (ERVs). Deletion of the YY1-binding site from the retroviral genome leads to a major loss of silencing in embryonic cells and a coordinated loss of repressive histone marks from the proviral chromatin. Depletion of YY1 protein results in marked upregulation of expression of exogenous viruses and of selected ERVs. Finally, we report an embryonic cell-specific interaction between YY1 and Trim28. Our results suggest a major role for YY1 in the silencing of both exogenous retroviruses and ERVs in embryonic cells.


Subject(s)
Embryonic Stem Cells/metabolism , Gene Silencing , Proviruses/genetics , YY1 Transcription Factor/metabolism , Animals , Binding Sites , Chromatin/metabolism , DNA, Viral/genetics , DNA, Viral/metabolism , Embryonic Stem Cells/virology , Gene Deletion , HEK293 Cells , Histones/metabolism , Humans , Mice , Moloney murine leukemia virus/genetics , Moloney murine leukemia virus/metabolism , NIH 3T3 Cells , Nuclear Proteins/metabolism , Proviruses/metabolism , Repressor Proteins/metabolism , Terminal Repeat Sequences , Transcription, Genetic , Tripartite Motif-Containing Protein 28 , YY1 Transcription Factor/genetics
5.
Aging Cell ; 6(2): 179-88, 2007 Apr.
Article in English | MEDLINE | ID: mdl-17286610

ABSTRACT

The nematode Caenorhabditis elegans has become one of the most widely used model systems for the study of aging, yet very little is known about how C. elegans age. The development of the worm, from egg to young adult has been completely mapped at the cellular level, but such detailed studies have not been extended throughout the adult lifespan. Numerous single gene mutations, drug treatments and environmental manipulations have been found to extend worm lifespan. To interpret the mechanism of action of such aging interventions, studies to characterize normal worm aging, similar to those used to study worm development are necessary. We have used 4',6'-diamidino-2-phenylindole hydrochloride staining and quantitative polymerase chain reaction to investigate the integrity of nuclei and quantify the nuclear genome copy number of C. elegans with age. We report both systematic loss of nuclei or nuclear DNA, as well as dramatic age-related changes in nuclear genome copy number. These changes are delayed or attenuated in long-lived daf-2 mutants. We propose that these changes are important pathobiological characteristics of aging nematodes.


Subject(s)
Aging/genetics , Caenorhabditis elegans/genetics , Cell Nucleus/genetics , Genome, Helminth , Animals , Caenorhabditis elegans/physiology , Caenorhabditis elegans Proteins/genetics , Caenorhabditis elegans Proteins/metabolism , Cell Nucleus/metabolism , Cells, Cultured , DNA, Helminth/metabolism , Gene Dosage , Genes, Helminth , Male
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