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1.
Dalton Trans ; 52(44): 16184-16188, 2023 Nov 14.
Article in English | MEDLINE | ID: mdl-37870873

ABSTRACT

Various naphthalenediimide (NDI) based electron donor-acceptor coordination polymers (D-A CPs) have been constructed and used to explore charge transfer (CT) and electron transfer (ET) behaviors. Up to now, significant progress has been made in the interface contact and electron donor-acceptor ability matching mechanism, while the electronic density effect of the electron donors on the CT and ET behaviors is still not known. Herein, two NDI-based D-A CPs, [Cd2(H2NDI)(IPA)2(H2O)2] (1) and [Cd2(H2NDI)(IPA-OH)2(H2O)2] (2), are constructed using an NDI-based ligand and two aromatic carboxylic acid ligands (H2NDI = 2,7-bis(3,5-dimethyl) dipyrazol-1,4,5,8-naphthalene tetracarboxydiimide, H2IPA = isophthalic acid; and H2IPA-OH = 5-hydroxyisophthalic acid). UV-vis and EPR spectroscopy and DFT calculations analyses reveal that the occurrence of themal electron transfer (TET) in 1 and 2 results from the HOMO of the IPA and IPA-OH lying higher than the LUMO of the NDI. Meanwhile, compared to 1, the UV-vis absorption spectrum of 2 exhibits a significant red shift, which suggests higher electron density of the donor and more electron transfer pathways are beneficial for the occurrence of intermolecular CT. After UV light irradiation, the comparison of the photochromic behavior of 1 and 2 confirms the negative effect of the stronger CT on photoinduced electron transfer (PET). The present study illustrates the delicate modulating effect of electron density on the CT and ET behaviors in D-A CPs.

2.
Inorg Chem ; 61(17): 6403-6410, 2022 May 02.
Article in English | MEDLINE | ID: mdl-35426305

ABSTRACT

Various arylenediimides (ADIs) have been applied to construct photoresponsive coordination polymers (CPs), while the size effect of ADI π-conjugate systems on the photoresponsive behaviors in CPs has been overlooked in the past few years. Herein, we emphasize the size effect of ADI π-conjugate systems on photoinduced electron transfer (ET) in CPs, taking two Eu3+-based CPs, [Eu(H2BINDI)(BINDI)0.5(H2O)2]·NH2(CH3)2·8H2O (1) and [Eu2(BIPMDI)(DMF)4(NO3)2]·H2O·2DMF (2) [H4BINDI = N,N'-bis(5-isophthalic acid)naphthalenediimide; H4BIPMDI = N,N'-bis(5-isophthalic acid)pyromellitic diimide; DMF = N,N-dimethylformamide], as a case. Both 1 and 2 display ET-based photochromic behaviors with distinct photoresponsive rates and coloration contrast, which can contribute to the size effect of diimide cores on the interfacial contacts of electron donors/acceptors. Meanwhile, ET between the neighboring larger NDI cores of the H4BINDI ligands can block ligand-to-metal charge transfer and quench luminescence of the Eu3+ metal center in 1. Therefore, this work will provide a theoretical basis for the development and exploration of photoresponsive materials.

3.
Dalton Trans ; 50(42): 15153-15161, 2021 Nov 02.
Article in English | MEDLINE | ID: mdl-34617099

ABSTRACT

Four naphthalene diimide (NDI)-derived coordination polymers (CPs), [Cd(3-DPNDI)(o-BDC)] (1), [Cd(3-DPNDI)2(p-BDC)(NO3)] (2), [Cd(3-DPNDI)(NDC)(H2O)2] (3), [Cd(3-DPNDI)(BPC)(H2O)] (4) (3-DPNDI = N,N'-di-(3-pyridyl)-1,4,5,8-naphthalene diimide, o-BDC = phthalic acid, p-BDC = terephthalic acid, NDC = 2,6-naphthalenedicarboxylic acid, BPC = biphenyl-4,4'-dicarboxylic acid), have been designed and prepared. The usage of carboxylic acid ligands with different sizes, shapes and charge densities leads to the distinct resultant architectures of four CPs and divergent weak interactions (lone pair⋯π, π⋯π and C-H⋯π interactions) of electron donors/acceptors, which further lead to the completely different photoinduced electron transfer (PET) and consequent photochromic properties. More specifically, 1 and 2 display excellent photochromic behaviors with a fast photoresponsive rate and high coloration contrast, which are attributed to the suitable interfacial contacts of electron donors/acceptors. However, 3 and 4 are basically optical inert, which could be attributed to the negative effect of the stronger charge transfer (CT) on PET. The present study illustrates the delicate modulating effect of carboxylic acid ligands on the resultant networks, interfacial relationship and PET together with photoresponsive behaviors.

4.
Dalton Trans ; 50(39): 13993-14000, 2021 Oct 12.
Article in English | MEDLINE | ID: mdl-34546252

ABSTRACT

A novel naphthalene diimide-based metal-organic framework (MOF) {[Zn(3-DPMNI)0.5(NDC)]·3DMF} (1@DMF), (H2NDC = 2,6-naphthalenedicarboxylic acid, DPMNI = N,N'-bis(3-pyridylmethyl)-1,4,5,8-naphthalene diimide, DMF = N,N'-dimethylformamide), has been synthesized, which shows a 3D pillar-layer architecture built of carboxylate layers and naphthalene diimide pillars. The compound exhibits outstanding photochromic performance due to photoinduced electron transfer (ET) between the electron-rich guest molecules and electron-deficient host framework (host-guest ET). Of note, the host framework of 1 cannot show a macroscopic color change owing to the absence of the ET pathway. Nevertheless, it exhibits discriminative photochromic behavior in the presence of electron-rich solvents, which is mainly attributed to different electron-donating abilities of guest solvents and distinct interfacial contacts of electron donors/acceptors. Furthermore, the MOF can also show discriminative ET chemochromic response to different sizes and shapes of organic amines, which can be potentially used for the visual detection of electron-rich organic amines, especially n-butylamine (n-BUA).

5.
Dalton Trans ; 50(2): 578-586, 2021 Jan 14.
Article in English | MEDLINE | ID: mdl-33464251

ABSTRACT

The novel composite, Fe3O4@SiO2@mSiO2-PW12/Ag, was successfully prepared by in situ loading Ag nanoparticles (Ag NPs) on the surface of grafted phosphotungstate (denoted as PW12) Fe3O4@SiO2@mSiO2via a photoreduction deposition method. PW12 not only acts as a reducing agent and stabilizer for Ag NPs but also as a bridge to link Ag NPs and the SiO2 shell in the loading process. Its activity toward the photodegradation of methyl orange (MO) and photoreduction of Cr2O72- anions was evaluated. Experimental results showed that Fe3O4@SiO2@mSiO2-PW12/Ag with 5.3 wt% Ag loading and 18.65 wt% of PW12 exhibits the highest photocatalytic efficacy, and complete degradation of MO and 91.2% photoreduction of Cr(vi) were realized under simulated sunlight for 75 min, respectively. The enhanced catalytic activities of the composite are due to its high specific surface area, the synergistic effect among the components and the formation of a heterojunction of PW12/Ag. The possible enhanced photocatalytic mechanism is proposed. The catalyst is durable and can be easily recovered using a magnet for recycling without a significant loss of catalytic activity.

6.
Inorg Chem ; 58(20): 13969-13978, 2019 Oct 21.
Article in English | MEDLINE | ID: mdl-31577144

ABSTRACT

A series of isomorphic lanthanide metal-organic frameworks (Ln-MOFs), {[Ln(L)(H2O)2]·5H2O}n (1-Ln, where Ln = Eu, Tb, Gd, and EuxTb1-x), have been synthesized by a rigid 1,3-bis(3,5-dicarboxyphenyl)imidazolium chloride (H4L+Cl-) ligand and Ln3+ ions via a solvothermal method. Single-crystal X-ray diffraction indicated that 1-Ln exhibited similar three-dimensional porous frameworks with one-dimensional channels decorated by the uncoordinated carboxylate oxygen atoms. The luminescent sensing studies indicated that 1-Eu is an outstanding reusable luminescent probe suitable for the simultaneous detection of Cr2O72-, CrO42-, and MnO4- ions in an aqueous solution. Remarkably, the different proportions of Eu3+ and Tb3+ can be combined into the same Ln-MOF to yield a new series of differently doped 1-EuxTb1-x MOFs. At the same excitation wavelength, they generated dual-emission peaks of Eu3+ and Tb3+ to show a gradual change in luminous color between yellow-green, yellow, orange, orange-red, and red. On the basis of the excellent optical properties of 1-Ln complexes, they can be employed as promising luminescent probe and multicolor tunable photoluminescence materials.

7.
Dalton Trans ; 48(17): 5793-5799, 2019 Apr 23.
Article in English | MEDLINE | ID: mdl-30977505

ABSTRACT

To better understand the factors determining the multi-step relaxation processes in polynuclear lanthanide single molecule magnets (SMMs), two Dy(iii)4 SMMs showing two-step relaxation processes were elaborately designed and investigated for their structure-dependent magnetic properties. Through targetedly fine-tuning the auxiliary ligand (from the anion of 1-phenylbutane-1,3-dione to 2-acetylcyclopentanone) on specific Dy(iii) sites while retaining the same type of coordination atoms, one of the two relaxation processes shifted to higher temperature with an increase of energy barrier, which permits the unambiguous assignment of the relaxation processes to specific metal sites. Therefore, the present {Dy4} systems provide a good example to probe the factors determining the relaxation dynamics, and point to a simple way to optimize the magnetic performance of polynuclear dysprosium SMMs.

8.
ACS Appl Mater Interfaces ; 11(19): 17368-17374, 2019 May 15.
Article in English | MEDLINE | ID: mdl-30951280

ABSTRACT

The health-threatening air pollution, especially from particulate matter (PM), has triggered increasing demands for developing low-cost and long-service-life air-cleaning technologies. In the present contribution, a range of high-efficiency textiles/metal-organic framework (MOF) composites (MOFs@textiles) air filters with excellent washable reusability is presented. By processing MOFs onto textile substrates via an eco-friendly solvent-free method to enable the microporous feature and also strong PM adhesion, we develop flexible, highly effective air filters with >95.00% PM removal efficiency (e.g., MiL-53(Al)@Aramid, PM2.5: 95.30%, PM10: 96.11%) under harmful air quality conditions (average PM2.5 mass concentration > 280 µg m-3 and PM10 > 360 µg m-3). Therefore, these MOFs@textiles are promising composites for producing efficient and recyclable out-/indoor air purifiers.

9.
Inorg Chem ; 58(5): 3409-3415, 2019 Mar 04.
Article in English | MEDLINE | ID: mdl-30762354

ABSTRACT

Owing to the rapid increase of Hg(II) ions in water resources, the design and development of new adsorbents for Hg(II) removal are becoming a significant challenge in environmental protection. Herein, a thiol-functionalized metal-organic framework (SH-MiL-68(In)) was successfully prepared through a post-synthesis modification procedure, and the framework intactness and porosity were well maintained after this process. SH-MiL-68(In) exhibited selective adsorption performance for Hg(II) ions in water. Meanwhile, SH-MiL-68(In) also shows a high adsorption capacity (450 mg g-1), large adsorption rate (rate constant k2 = 1.25 g mg-1 min-1), and good recycling of adsorption capacity toward Hg(II) ions. The excellent adsorption performance resulted from the strong binding interactions between -SH soft basic groups and Hg(II) soft acidic ions.

10.
Dalton Trans ; 48(6): 2135-2141, 2019 Feb 05.
Article in English | MEDLINE | ID: mdl-30667435

ABSTRACT

The study of mononuclear lanthanide-based systems, where the observed Single Molecule Magnets (SMMs) properties originate from the local magnetic anisotropy of the single lanthanide ion, has been extensively investigated in the literature. The case for polynuclear lanthanide SMMs becomes more challenging both experimentally and theoretically due to the complexity of such architectures involving interactions between the magnetic centers. Much interest was devoted to the study of the structural effect on the magnetic interactions and relaxation dynamics. However, the understanding of the structural influence on those two factors remains a difficult task. To address this issue, a system containing two structurally related tetranuclear Dy(iii) SMMs, namely [Dy4(L)4(OH)2(DMF)4(NO3)2]·2(DMF)·(H2O) (1) and [Dy4(L)4(OH)2(DMF)2(NO3)2] (2) (H2L = 2-(2-hydroxy-3-methoxybenzylideneamino)phenol), is introduced and investigated. Through modifying the ligands on the changeable coordination sites, the intramolecular magnetic interactions and relaxation dynamics in these two Dy(iii)4 SMMs can be tuned. Both complexes exhibit slow relaxation of their magnetization with a relaxation barrier of 114 K for complex 2 while a blocking temperature below 2 K is observed for complex 1. Ab initio calculations reveal that changes in coordination numbers and geometries on the Dy(iii) sites can significantly affect the magnetic interactions as well as single-ion anisotropy. The combination of experimental work and ab initio calculations offers insight into the relationship between structures and magnetic properties and sheds light on the rational design of future polynuclear lanthanide SMMs with enhanced magnetic properties.

11.
Dalton Trans ; 47(28): 9466-9473, 2018 Jul 17.
Article in English | MEDLINE | ID: mdl-29961796

ABSTRACT

A new luminescent metal-organic framework, {[Cd3(HL)2(H2O)3]·3H2O·2CH3CN}n (1) (H4L = 1-(3,5-dicarboxylatobenzyl)-3,5-pyrazole dicarboxylic acid), has been synthesized by solvothermal reaction and characterized by infrared spectroscopy, powder X-ray diffraction, thermogravimetry measurements and so on. 1 shows a new trinodal (4,4,6)-connected topology. Importantly, 1 displays intense luminescence in the solid state and high luminescent sensitivity and selectivity for Fe3+, CrO42- and Cr2O72- ions in aqueous solution, making it a potential probe for detecting these substances. The quenching mechanisms are also further discussed in detail. In addition, further research on the adsorption of dyes shows that 1 can selectively adsorb Congo red dye from other dye molecules.

12.
Inorg Chem ; 57(14): 8550-8557, 2018 Jul 16.
Article in English | MEDLINE | ID: mdl-29969252

ABSTRACT

The study of mononuclear lanthanide-based systems, where the observed single-molecule magnets (SMMs) properties originate from the local description of the magnetic properties of the lanthanide ion, has been widely investigated through the literature. The case of polynuclear SMMs becomes more challenging both experimentally and theoretically due to the complexity of such architectures involving interactions between the magnetic centers. Many efforts have been focused on the understanding of the nature of these interactions and their effects on the SMM properties. In this work, a series of three structurally related tetranuclear dysprosium(III) SMMs, namely, [Dy4(L)4(OH)2(DMF)4(NO3)2]·2(DMF)·(H2O) (1), [Dy4(L)4(OH)2(DMF)2(tfaa)2]·2(CH3CN) (2), and [Dy4(L)4(OH)2(DMF)2(acac)2]·2(DMF) (3) (H2L = 2-(2-hydroxy-3-methoxybenzylideneamino)phenol, Htfaa = trifluoroacetylactone, Hacac = acetylacetonate), has been synthesized and investigated. By a fine-tuning of the ligands on the changeable coordination sites in these Dy(III)4 SMMs, the intramolecular magnetic interactions can be modified, switching from antiferromagnetic (for 1 and 2) to ferromagnetic (for 3). Ab initio calculations support these statements. In addition, the formation of 1 has been analyzed by ESI-MS analysis of the reaction mixture, indicating rather quick and high-yield formation of the [Dy4] framework in solution. The combination of experimental work and ab initio calculations offers further insight into the relationship between structures and magnetic properties and sheds light on how to tune magnetic interactions in future polynuclear dysprosium complexes.

13.
Yi Chuan ; 39(10): 897-907, 2017 Oct 20.
Article in English | MEDLINE | ID: mdl-29070485

ABSTRACT

Wnt signaling pathway plays important roles in the development and homeostasis of multicellular organisms. Through their bindings with the Frizzled receptors, the Wnt ligands regulate a wide range of developmental processes, such as axis patterning, cell division, and cell fate specification. Wnt signaling plays vital roles in the development of inner ear of the mouse. In the early stages of inner ear development, Wnt signaling specifies the size of the placode and the formation of the otic vesicle. In later stages, Wnt signaling mediates hair cell specification and orients the stereociliary bundles in a uniform direction. In this review, we summarize the current knowledge on the roles of Wnt signaling in hair cell differentiation and regeneration, which may provide references and insights for investigators in the field.


Subject(s)
Hair Cells, Auditory/cytology , Regeneration , Wnt Signaling Pathway/physiology , Animals , Cell Differentiation , Hair Cells, Auditory/physiology , Humans , Thrombospondins/physiology
14.
Chempluschem ; 82(5): 716-720, 2017 May.
Article in English | MEDLINE | ID: mdl-31961526

ABSTRACT

The use of molecular iodine to tune the electrical conductivity in metal-organic frameworks is an effective but seldom investigated strategy. Herein, the single-crystal-to-single-crystal transformation of [Co1.5 (bdc)1.5 (H2 bpz)]⋅DMF⋅4 H2 O (1) to [Co1.5 (bdc)1.5 (H2 bpz)]⋅0.5 I2 ⋅DMF (I2 @1) (H2 bdc=1,4-benzenedicarboxylic acid, H2 bpz=3,3',5,5'-tetramethyl-4,4'-bipyrazole) upon I2 loading caused a three orders of magnitude enhancement in electrical conductivity of the framework. Single-crystal X-ray diffraction revealed that I2 exists as a single molecule embedded in the channels of framework, and the C-H⋅⋅⋅I hydrogen bonds between I2 molecules and phenyl units on the porous surface of the framework were suggested to participate in n→σ* host-guest charge transfer, leading to increased electrical conductivity in I2 @1. Furthermore, 1 displayed moderate adsorption selectivity for CO2 over CH4 and N2 .

15.
Chempluschem ; 82(3): 376-382, 2017 Mar.
Article in English | MEDLINE | ID: mdl-31962027

ABSTRACT

Three metal-organic frameworks (MOFs), [Cd(Hpzbpdc)(H2 O)]⋅H2 O (1), [Mn2 (Hpzbpdc)2 (dmf)2 ] (2), and [H2 N(CH3 )2 ]0.5 [Eu(Hpzbpdc)1.5 (HCOO)0.5 (dmf)0.5 ]⋅DMF⋅0.5 H2 O (3) (H3 pzbpdc=4'-(2 H-pyrazol-3-yl)biphenyl-3,5-dicarboxylic acid), have been solvothermally synthesized from one pyrazoyl-carboxyl bifunctional ligand and characterized by single-crystal structures. The H3 pzbpdc ligand in 1-3 displays various coordination modes through the pyrazoyl and carboxyl groups. Both 1 and 3 contain dinuclear cluster building units and reveal a four-connected gismondine (gis) zeolite 3D framework and a 2D grid layer structure, respectively. Compound 1 shows blue luminescence, compound 3 reveals red luminescence that arises from efficient energy transfer from the organic ligand to the europium(III) ion, and compound 2 reveals an uncommon (3,8)-connected tfz-d; UO3 net with a rare Mn4 (COO)6 cluster and shows antiferromagnetic interactions between the manganese(II) ions.

16.
Inorg Chem ; 55(8): 3952-9, 2016 Apr 18.
Article in English | MEDLINE | ID: mdl-27022691

ABSTRACT

Seven new isostructural lanthanide metal-organic frameworks (Ln-MOFs), [Ln(Hpzbc)2(NO3)]·H2O (1-Ln, Ln = Nd(3+), Sm(3+), Eu(3+), Gd(3+), Tb(3+), Er(3+), and Yb(3+) ions, H2pzbc = 3-(1H-pyrazol-3-yl) benzoic acid), with one-dimensional (1D) channels decorated by nitrate anions and pyrazoyl groups have been constructed. 1-Ln, as revealed by structural analysis, represent uncommon microporous 3D Ln-pyrazoyl-carboxyl systems using pyrazoyl-carboxyl bifunctional ligands as bridges. The luminescent investigations show that 1-Eu is an excellent MOF-based fluorescent probe, with high sensitivity, selectivity, and simple regeneration, for environmentally relevant Fe(3+) and Cr2O7(2-) ions. 1-Eu also presents highly selective capture for CO2 over N2 and CH4 due to the multiple binding sites for CO2 molecules, which were supported by Grand Canonical Monte Carlo (GCMC) simulations.

17.
Chempluschem ; 81(12): 1299-1304, 2016 Dec.
Article in English | MEDLINE | ID: mdl-31964061

ABSTRACT

Luminescent metal-organic frameworks (LMOFs) containing fluorescent probes for the detection of pollutants such as organic solvents and heavy metals are becoming increasingly important, with lanthanide-MOF (Ln-MOF) materials receiving greater attention owing to the possibility of achieving fine-tuned luminescent properties. Herein, two unusual isostructural nanocage-based three-dimensional Ln-MOFs, 1-Ln (Ln=Tb, Eu), are constructed, using a new diisophthalate ligand with active Lewis basic triazole sites. Selective gas adsorption, especially the removal of CO2 from CH4 , a primary component of natural gas and biogas, is desirable in terms of both economic and environmental considerations. 1-Eu is found to exhibit highly efficient luminescent sensing for Fe3+ cations and Cr2 O7 2- anions, as well as selective CO2 capture over CH4 .

18.
Chemistry ; 21(46): 16525-31, 2015 Nov 09.
Article in English | MEDLINE | ID: mdl-26417961

ABSTRACT

The reaction of N-rich pyrazinyl triazolyl carboxyl ligand 3-(4-carboxylbenzene)-5-(2-pyrazinyl)-1H-1,2,4-triazole (H2 cbptz) with MnCl2 afforded 3D cationic metal-organic framework (MOF) [Mn2 (Hcbptz)2 (Cl)(H2 O)]Cl⋅DMF⋅0.5 CH3 CN (1), which has an unusual (3,4)-connected 3,4T1 topology and 1D channels composed of cavities. MOF 1 has a very polar framework that contains exposed metal sites, uncoordinated N atoms, narrow channels, and Cl(-) basic sites, which lead to not only high CO2 uptake, but also remarkably selective adsorption of CO2 over N2 and CH4 at 298-333 K. The multiple CO2 -philic sites were identified by grand canonical Monte Carlo simulations. Moreover, 1 shows excellent stability in natural air environment. These advantages make 1 a very promising candidate in post-combustion CO2 capture, natural-gas upgrading, and landfill gas-purification processes.

19.
Int J Oncol ; 46(5): 2138-42, 2015 May.
Article in English | MEDLINE | ID: mdl-25760143

ABSTRACT

Small interfering RNA (siRNA) technology is a powerful tool in biomedical research and holds great potential for RNA interference-based therapies for HIV, hepatitis and cancer. However, the absence of a safe and efficient method for the delivery of siRNA has become a bottleneck for their development. Nanocrystallized hydroxyapatite (nHAP) appears to be an optimal candidate non-viral gene vector for several reasons, including its good biocompatibility and ease of production, however, nHAP microemulsions cannot remain monodispersed for long periods of time. Due to their high surface energy, nHAP particles gradually aggregate into large ones that are difficult for the cell to take up. To overcome this we modified nHAP with polyethylenimine (PEI) to generate a compound (MnHAP) with a tight size-distribution of <200 nm. The positive surface potential of MnHAP inhibited particle aggregation and thus made it easier to conjugate more siRNA. The transfection efficiency of MnHAP/fluorescent FAM-labeled siRNA complex was tested using flow cytometry, and the transfected cells were observed using fluorescence microscopy. The cytotoxicity of MnHAP/siRNA complexes to the human liver cancer cell line BEL-7402 was assessed in vitro by a formazan dye assay. Our results show that the in vitro transfection efficiency of MnHAP/siRNA was equivalent to that of the commercially available transfection agent Lipofectamine® 2000, but with decreased cytotoxicity. The MnHAP nanoparticles were also able to deliver siRNA for silencing of glyceraldehyde-3-phosphate dehydrogenase (GAPDH) in BEL-7402 cells, which supports that MnHAP might be a promising non-viral vector for biomedical research and gene delivery.


Subject(s)
Carcinoma, Hepatocellular , Genetic Therapy/methods , Liver Neoplasms , Nanoparticles/chemistry , RNA, Small Interfering/administration & dosage , Transfection/methods , Blotting, Western , Cell Line, Tumor , Durapatite/chemistry , Genetic Vectors/administration & dosage , Genetic Vectors/chemistry , Humans , In Vitro Techniques , Polyethyleneimine/chemistry
20.
BMC Genomics ; 15: 908, 2014 Oct 17.
Article in English | MEDLINE | ID: mdl-25326317

ABSTRACT

BACKGROUND: Selenium (Se) and sulfur (S) are closely related elements that exhibit similar chemical properties. Some genes related to S metabolism are also involved in Se utilization in many organisms. However, the evolutionary relationship between the two utilization traits is unclear. RESULTS: In this study, we conducted a comparative analysis of the selenophosphate synthetase (SelD) family, a key protein for all known Se utilization traits, in all sequenced archaea. Our search showed a very limited distribution of SelD and Se utilization in this kingdom. Interestingly, a SelD-like protein was detected in two orders of Crenarchaeota: Sulfolobales and Thermoproteales. Sequence and phylogenetic analyses revealed that SelD-like protein contains the same domain and conserved functional residues as those of SelD, and might be involved in S metabolism in these S-reducing organisms. Further genome-wide analysis of patterns of gene occurrence in different thermoproteales suggested that several genes, including SirA-like, Prx-like and adenylylsulfate reductase, were strongly related to SelD-like gene. Based on these findings, we proposed a simple model wherein SelD-like may play an important role in the biosynthesis of certain thiophosphate compound. CONCLUSIONS: Our data suggest novel genes involved in S metabolism in hyperthermophilic S-reducing archaea, and may provide a new window for understanding the complex relationship between Se and S metabolism in archaea.


Subject(s)
Archaeal Proteins/genetics , Computational Biology/methods , Crenarchaeota/enzymology , Phosphotransferases/genetics , Sulfur/metabolism , Amino Acid Sequence , Archaeal Proteins/chemistry , Conserved Sequence , Crenarchaeota/chemistry , Crenarchaeota/genetics , Gene Expression Regulation, Archaeal , Phosphotransferases/chemistry , Phylogeny , Selenium/metabolism
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