Comparing the influence of humic/fulvic acid and tannic acid on Cr(VI) adsorption onto polystyrene microplastics: Evidence for the formation of Cr(OH)3 colloids.

Microplastics (MPs) can act as vectors for various contaminants in the aquatic environment. Although some research has investigated the adsorption characteristics and influencing factors of metals/organic molecules on MPs, the effects of dissolved organic matter (DOM) (which are ubiquitous active species in ecosystems) on metal oxyanions such as Cr(VI) capture by MPs are largely unknown. This study explored the adsorption behaviors and mechanisms of Cr(VI) oxyanions onto polystyrene (PS) MPs using batch adsorption experiments and multiple spectroscopic methods. The effects of representative DOM components (i.e., humic acid (HA), fulvic acid (FA) and tannic acid (TA)) on Cr(VI) capture by PS were particularly studied. Results revealed a significantly enhanced adsorption of Cr(VI) on PS in the presence of TA. The Cr(VI) adsorption capacity was increased from 2876 µg g-1 to 4259 µg g-1 and 5135 µg g-1 when the TA concentrations raised from 0 to 10 and 20 mg L-1, respectively. Combined microscopic and spectroscopic investigations revealed that Cr(VI) was reduced to Cr(III) by TA and formed stable Cr(OH)3 colloids on PS surfaces. Contrarily, HA and FA inhibited Cr(VI) adsorption onto PS, especially at pH > 2.0 and higher DOM concentrations, due to site competition and electrostatic repulsion. Increase in pH was found to reduce zeta potentials of MPs, resulting in inhibited Cr(VI) adsorption. The adsorbed Cr(VI) declined with increasing ionic strength, implying that outer-sphere surface complexation affected the adsorption process in the presence of DOM. These new findings improved our fundamental understanding of the fate of Cr(VI) and MPs in DOM-rich environmental matrices.

Insights into the adsorption mechanism of tannic acid by a green synthesized nano-hydroxyapatite and its effect on aqueous Cu(II) removal.

The polyphenolic tannic acid (TA) has been widely used in the stabilization and surface modification of nanomaterials. The interaction mechanism of TA with the biogenic nano-hydroxyapatite (nHAP) and its environmental importance, however, are poorly understood. This study explored the adsorption of TA using the green synthesized, eggshell-derived nHAP and implications of this process for the removal of aqueous Cu(II) via batch adsorption experiments, Raman spectroscopy, Fourier transform infrared spectroscopy (FTIR), and X-ray photoelectron spectroscopy (XPS) investigations. TA adsorption by nHAP was a complex pH-dependent process and significantly correlated with TA molecule speciation and amphoteric properties of nHAP via multiple adsorption modes including surface complexation, electrostatic attraction, and hydrogen bond. The maximum TA adsorption amount was found to be 94.8 mg/g for less crystalline nHAP with lower calcination temperature. In the ternary Cu-TA-nHAP systems, TA promoted Cu(II) adsorption at pH < 5 and reduced Cu(II) uptake at pH > 5. Further studies of the effects of ionic strength and addition sequences, as well as Raman, FTIR, and XPS analyses revealed Cu(II) adsorption on nHAP was mainly dominated by inner-sphere surface complexation. These results can shed light on not only the utility of biogenic nHAP for TA and Cu(II) adsorption but also the evaluation of the effect of TA on the environmental behavior of heavy metals.

Proteomic analysis of N-glycosylation in mosquito dopachrome conversion enzyme.

A novel dopachrome conversion enzyme (DCE) is present in insects and involved in their melanization pathway. DCE shares no sequence homology with any noninsect species from bacteria to humans. Several DCE sequences have been available, but enzyme structure and catalytic mechanism are unclear. This study concerns DCE PTMs, especially glycosylation. A mosquito DCE was purified and its monosaccharide composition, N-glycosylation site, and oligosaccharide structures were determined. Results showed that N-acetyl D-glucosamine and D-mannose are the major monosaccharides and L-fucose, D-xylose, and D-arabinose are the minor ones in mosquito DCE. Glycosylation site and oligosaccharide structures were elucidated from MS and MS/MS spectra of trypsin-digested DCE glycopeptides. A single N-glycosylation site (Asn285 -Glu-Thr) was identified in DCE and was proven to be fully glycosylated. Man3GlcNAc2, Man3(Fuc)1-2GlcNAc2, and their truncated structures were the dominant oligosaccharides. In addition, high mannose-type structures (Man4-7(Fuc)GlcNAc2) were also identified. Removal of DCE N-oligosaccharides with peptide N-glycosidase (PNGase F) decreased its activity and thermal stability. However, partial DCE deglycosylation with alpha-mannosidase or alpha-fucosidase somewhat stimulated its activity and improved its thermal stability. During mass spectrometric analysis of DCE glycopeptides, their CID patterns were highly intriguing, in that some glycopeptides underwent both C-terminal rearrangement and formation of dimeric structures during CID. Results of this study provide an interesting example in terms of potential complexity of the glycopeptide CID fragmentation pattern.

Biochemical mechanisms leading to tryptophan 2,3-dioxygenase activation.

Tryptophan 2,3-dioxygenase (TDO) is the first enzyme in the tryptophan oxidation pathway. It is a hemoprotein and its heme prosthetic group is present as a heme-ferric (heme-Fe(3+)) form that is not active. To be able to oxidize tryptophan, the heme-Fe(3+) form of the enzyme must be reduced to a heme-ferrous (heme-Fe(2+)) form and this study describes conditions that promote TDO activation. TDO is progressively activated upon mixing with tryptophan in a neutral buffer, which leads to an impression that tryptophan is responsible for TDO activation. Through extensive analysis of factors resulting in TDO activation during incubation with tryptophan, we conclude that tryptophan indirectly activates TDO through promoting the production of reactive oxygen species. This consideration is supported by the virtual elimination of the initial lag phase when either pre-incubated tryptophan solution was used as the substrate or a low concentration of superoxide or hydrogen peroxide was incorporated into the freshly tryptophan and TDO mixture. However, accumulation of these reactive oxygen species also leads to the inactivation of TDO, so that both TDO activation and inactivation proceed with the specific outcome depending greatly on the concentrations of superoxide and hydrogen peroxide. As a consequence, the rate of TDO catalysis varies depending upon the proportion of the active to inactive forms of the enzyme, which is in a dynamic relationship in the reaction mixture. These data provide some insight towards elucidating the molecular regulation of TDO in vivo.

Major chorion proteins and their crosslinking during chorion hardening in Aedes aegypti mosquitoes.

The chorion of Aedes aegypti eggs undergoes a hardening process following oviposition and individual chorion proteins become insoluble thereafter. Our previous studies determined that peroxidase-catalyzed chorion protein crosslinking and phenoloxidase-mediated chorion melanization are primarily responsible for the formation of a hardened, desiccation resistant chorion in A. aegypti eggs. To gain further understanding of peroxidase- and phenoloxidase-catalyzed biochemical processes during chorion hardening, we analyzed chorion proteins, identified three low molecular weight major endochorion proteins that together constituted more than 70% of the total amount of endochorion proteins, and assessed their insolubilization in relation to phenoloxidase- and peroxidase-catalyzed reactions under different conditions. Our data suggest that the three low molecular weight endochorion proteins undergo disulfide bond crosslinking prior to oviposition in A. aegypti eggs, and that they undergo further crosslinking through dityrosine or trityrosine formation by peroxidase-catalyzed reactions. Our data suggest that chorion peroxidase is primarily responsible for the irreversible insolubilization of the three major endochorion proteins after oviposition. The molecular mechanisms of chorion hardening are also discussed.

The malaria parasite Plasmodium falciparum histones: organization, expression, and acetylation.

Histones are the building units of nucleosomes and play essential roles in DNA replication, repair and transcription. A comprehensive analysis of histone genes revealed that the Plasmodium falciparum genome encodes a canonical form of each core histone and four histone variants H2A.Z, H3.3, centromere-specific H3 (CenH3), and H2Bv. Mass spectrometry confirmed the synthesis of all histones except CenH3. Real-time reverse transcriptase-polymerase chain reaction and immunoblotting detected a dramatic increase in core histone gene expression during the late trophozoite stages, consistent with their role in replication-related nucleosome assembly. In contrast, the expression of variant histones decreased in mid- or late trophozoite stages. The N-terminal tails of histones participate in transcription regulation through covalent modifications, especially at the lysine residues. In accordance, mass spectrometry analysis revealed acetylation of lysines and methylation of lysines and arginines in the N-termini of H3, H3.3, and H4. Moreover, we identified a new pattern of lysine modifications of the H2A.Z variant. Using a panel of acetylation-specific antibodies, we found that K5, K8, and K12 of H4 were abundantly acetylated at a relatively steady level throughout the erythrocytic cycle. In comparison, the H3-K9 acetylation increased in late trophozoite and schizont stages, while H4-K16 acetylation peaked in mid-trophozoite stage. We have also shown that despite the sequence divergence in the PfH3 N-terminus from their mammalian homologues, the recombinant PfH3 was still efficiently acetylated by both recombinant and native PfGCN5 at K9 and K14. This study suggests that histone replacement and the dynamic histone modifications play important roles in regulating gene expression during erythrocytic development of the malaria parasite.

Purification and primary structural characterization of prophenoloxidases from Aedes aegypti larvae.

There are more prophenoloxidase (proPO) genes in mosquitoes than other model insect species studied to date. The high sequence similarity among mosquito proPOs makes it extremely difficult to use histochemical methods to determine the presence of individual proPOs in different stages of mosquito development or their tissue locations. As a consequence, there always are questions when attempting to assign any observed functions to a particular proPO. By following the PO fractions of Aedes aegypti larval proteins during chromatographic separations, we were able to isolate two proPO fractions. Each displayed a single protein band on SDS-PAGE gel. The two fractions showed relative molecular weights of 75 and 60k Da. In-gel trypsin-digestion of the two protein bands and subsequent mass spectrometry of their tryptic peptides confirmed their proPO identities. The 75 kDa protein was a new Aedes aegypti proPO that has not been described in databases, whereas the 60 kDa band contained three previously described Aedes aegypti proPO sequences, with the absence of approximately 125-128 residues at their carboxyl end as compared with their deduced sequences, which suggests that some proPOs might undergo specific proteolytic processing after synthesis. Comparison between the transcriptional profiles of different proPOs and the number of isolated proPO proteins in late-stage larvae indicates that individual proPOs might be transcribed during the earlier stages of larval development, and that resulting proPO proteins persist through all larval stages. Results of this study provide a basis for developing a comprehensive understanding of structure/function relationships of individual proPOs in mosquitoes.

Characterization of N-linked oligosaccharides in chorion peroxidase of Aedes aegypti mosquito.

A peroxidase is present in the chorion of Aedes aegypti eggs and catalyzes chorion protein cross-linking during chorion hardening, which is critical for egg survival in the environment. The unique chorion peroxidase (CPO) is a glycoprotein. This study deals with the N-glycosylation site, structures, and profile of CPO-associated oligosaccharides using mass spectrometric techniques and enzymatic digestion. CPO was isolated from chorion by solubilization and several chromatographic methods. Mono-saccharide composition was analyzed by HPLC with fluorescent detection. Our data revealed that carbohydrate (D-mannose, N-acetyl D-glucosamine, D-arabinose, N-acetyl D-galactosamine, and L-fucose) accounted for 2.24% of the CPO molecular weight. A single N-glycosylation site (Asn328-Cys- Thr) was identified by tryptic peptide mapping and de novo sequencing of native and PNGase A-deglycosylated CPO using matrix-assisted laser/desorption/ionization time-of-flight mass spectrometry (MALDI/TOF/MS) and liquid chromatography/tandem mass spectrometry (LC/MS/MS). The Asn328 was proven to be a major fully glycosylated site. Potential tryptic glycopeptides and profile were first assessed by MALDI/TOF/MS and then by precursor ion scanning during LC/MS/MS. The structures of N-linked oligosaccharides were elucidated from the MS/MS spectra of glycopeptides and exoglycosidase sequencing of PNGase A-released oligosaccharides. These CPO-associated oligosaccharides had dominant Man3GlcNAc2 and Man3 (Fuc) GlcNAc2 and high mannose-type structures (Man(4-8)GlcNAc2). The truncated structures, Man2GlcNAc2 and Man2 (Fuc) GlcNAc2, were also identified. Comparison of CPO activity and Stokes radius between native and deglycosylated CPO suggests that the N-linked oligosaccharides influence the enzyme activity by stabilizing its folded state.

Novel glycosidic linkage in Aedes aegypti chorion peroxidase: N-mannosyl tryptophan.

Aedes aegypti chorion peroxidase (CPO) plays a crucial role in chorion hardening by catalyzing chorion protein cross-linking through dityrosine formation. The enzyme is extremely resistant to denaturing conditions, which seem intimately related to its post-translational modifications, including disulfide bond formation and glycosylation. In this report, we have provided data that describe a new type of glycosylation in CPO, where a mannose is linked to the N-1 atom of the indole ring of Trp residue. Through liquid chromatography/electrospray ionization/tandem mass spectrometry and de novo sequencing of CPO tryptic peptides, we determined that three of the seven available Trp residues in mature CPO are partially (40-50%) or completely mannosylated. This conclusion is based on the following properties of the electrospray ionization/tandem mass spectrometry spectra and the enzymatic reaction of these peptides: 1) the presence of a 162-Da substituent in each Trp residue; 2) the presence of abundant fragments of m/z 163 ([Hex + H]) and [M + H - 162] (typical for N-glycosides); 3) the absence of a loss of 120 Da (this loss is typical for aromatic C-glycosides); and 4) the cleavage of the glycosidic linkage by PNGase A or F (typical for N-glycans). These results establish that a C-N bond is formed between the anomeric carbon of a mannose residue and the N-1 atom of the indole ring of Trp. This is the first report that provides definitive evidence for N-mannosylation of Trp residues in a protein. In addition, our data demonstrate that PNGase can hydrolyze Trp N-linked mannose in peptides, which is unusual because no typical beta-amide bond is present in the Trp-mannosyl moiety. Results of this study should stimulate research toward a comprehensive understanding of physiology and biochemistry of Trp N-mannosylation in proteins and the overall biochemical mechanisms of PNGase-catalyzed reactions.

pH dependence, substrate specificity and inhibition of human kynurenine aminotransferase I.

Human kynurenine aminotransferase I/glutamine transaminase K (hKAT-I) is an important multifunctional enzyme. This study systematically studies the substrates of hKAT-I and reassesses the effects of pH, Tris, amino acids and alpha-keto acids on the activity of the enzyme. The experiments were comprised of functional expression of the hKAT-I in an insect cell/baculovirus expression system, purification of its recombinant protein, and functional characterization of the purified enzyme. This study demonstrates that hKAT-I can catalyze kynurenine to kynurenic acid under physiological pH conditions, indicates indo-3-pyruvate and cysteine as efficient inhibitors for hKAT-I, and also provides biochemical information about the substrate specificity and cosubstrate inhibition of the enzyme. hKAT-I is inhibited by Tris under physiological pH conditions, which explains why it has been concluded that the enzyme could not efficiently catalyze kynurenine transamination. Our findings provide a biochemical basis towards understanding the overall physiological role of hKAT-I in vivo and insight into controlling the levels of endogenous kynurenic acid through modulation of the enzyme in the human brain.

Molecular characterization of a novel peroxidase involved in Aedes aegypti chorion protein crosslinking.

Peroxidase-catalyzed chorion or eggshell protein crosslinking is an important biochemical event contributing to the formation of a protective chorion or eggshell in insects. Although the survival of the developing or developed embryo in the environment before hatching relies on the protection of the chorion, the identity of the peroxidative enzyme responsible for mediating chorion protein crosslinking has never been identified in any insect species. In this report, we describe the determination of partial peptide sequences of a novel mosquito chorion peroxidase through LC/MS/MS of a trypsin-digested chorion peroxidase active fraction, specific localization of the enzyme in the chorion through histochemical analysis, proteolytic processing of chorion peroxidase through comparison of the accurate mass of its intact mature enzyme with molecular mass of its deduced amino acid sequence, isolation of its cDNA based on chorion peroxidase partial amino acid sequences, evaluation of its transcriptional profile in developing ovaries, and application of the primary mosquito chorion peroxidase sequence in predicting potential chorion peroxidases in other species.

Crystal structure of human kynurenine aminotransferase I.

The kynurenine pathway has long been regarded as a valuable target for the treatment of several neurological disorders accompanied by unbalanced levels of metabolites along the catabolic cascade, kynurenic acid among them. The irreversible transamination of kynurenine is the sole source of kynurenic acid, and it is catalyzed by different isoforms of the 5'-pyridoxal phosphate-dependent kynurenine aminotransferase (KAT). The KAT-I isozyme has also been reported to possess beta-lyase activity toward several sulfur- and selenium-conjugated molecules, leading to the proposal of a role of the enzyme in carcinogenesis associated with environmental pollutants. We solved the structure of human KAT-I in its 5'-pyridoxal phosphate and pyridoxamine phosphate forms and in complex with the competing substrate l-Phe. The enzyme active site revealed a striking crown of aromatic residues decorating the ligand binding pocket, which we propose as a major molecular determinant for substrate recognition. Ligand-induced conformational changes affecting Tyr(101) and the Trp(18)-bearing alpha-helix H1 appear to play a central role in catalysis. Our data reveal a key structural role of Glu(27), providing a molecular basis for the reported loss of enzymatic activity displayed by the equivalent Glu --> Gly mutation in KAT-I of spontaneously hypertensive rats.